RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CCDC90BQ9GZT6 254 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 FAM192AQ9GZU8 254 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 PSORS1C1Q9UIG5 152 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 MAB21L2Q9Y586 359 aa9.14□□□□□ -0.95
DDB1-222ENST00000543627 SIRT4Q9Y6E7 314 aaPredicted RBP9.14□□□□□ -0.95
DDB1-222ENST00000543627 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 ATP6V1G2O95670 118 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 LALBAP00709 142 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 CD2P06729 351 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 PRKACAP17612 351 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 RAB3AP20336 220 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 DLX1P56177 255 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 COL10A1Q03692 680 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 BAMBIQ13145 260 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 C6orf141Q5SZD1 244 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 ATPAF1Q5TC12 328 aaPredicted RBP9.13□□□□□ -0.95
DDB1-222ENST00000543627 FIP1L1Q6UN15 594 aaKnown RBP9.13□□□□□ -0.95
DDB1-222ENST00000543627 UTS2BQ765I0 119 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 VMO1Q7Z5L0 202 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 CMTM4Q8IZR5 234 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 HAVCR2Q8TDQ0 301 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 GHSRQ92847 366 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 SPSB1Q96BD6 273 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 ORAI1Q96D31 301 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 NR1H4Q96RI1 486 aaPredicted RBP9.13□□□□□ -0.95
DDB1-222ENST00000543627 NRIP2Q9BQI9 281 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 DNTTIP1Q9H147 329 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 SIRT7Q9NRC8 400 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 RBFOX1Q9NWB1 397 aaKnown RBP9.13□□□□□ -0.95
DDB1-222ENST00000543627 ING3Q9NXR8 418 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 TAS2R4Q9NYW5 299 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 CNOT2Q9NZN8 540 aaKnown RBP9.13□□□□□ -0.95
DDB1-222ENST00000543627 ERGIC3Q9Y282 383 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 GSTK1Q9Y2Q3 226 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 ZNF281Q9Y2X9 895 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 FBN1P35555 2871 aaKnown RBP9.13□□□□□ -0.95
DDB1-222ENST00000543627 MXRA5Q9NR99 2828 aa9.13□□□□□ -0.95
DDB1-222ENST00000543627 MDFIC2A0A1B0GVS7 189 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 GPR37O15354 613 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 SULT1B1O43704 296 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 NOS1APO75052 506 aaPredicted RBP9.12□□□□□ -0.95
DDB1-222ENST00000543627 KNG1P01042 644 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 CELP19835 753 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 GABRR1P24046 479 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 EDDM3BP56851 147 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 PPP3R1P63098 170 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 PDZK1IP1Q13113 114 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 BLMHQ13867 455 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 EDDM3AQ14507 147 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 PDCD1Q15116 288 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 CCDC58Q4VC31 144 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 PHC2Q8IXK0 858 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 FAM58AQ8N1B3 248 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 ZNF561Q8N587 486 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 DNAAF1Q8NEP3 725 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 OR52N1Q8NH53 320 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 MYDGFQ969H8 173 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 UPRTQ96BW1 309 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 TBX15Q96SF7 602 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 C19orf24Q9BVV8 132 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 JAM3Q9BX67 310 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 CHST6Q9GZX3 395 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 PLCXD1Q9NUJ7 323 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 IL36RNQ9UBH0 155 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 GLS2Q9UI32 602 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 ZNF222Q9UK12 451 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 ING4Q9UNL4 249 aa9.12□□□□□ -0.95
DDB1-222ENST00000543627 CENPVL3A0A0U1RRI6 287 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 TRIM77I1YAP6 450 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 SIRPB1O00241 398 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 OGG1O15527 345 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 HAND1O96004 215 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 FSHBP01225 129 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 CDK1P06493 297 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 CHRM2P08172 466 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 EEF1B2P24534 225 aaKnown RBP9.11□□□□□ -0.95
DDB1-222ENST00000543627 MPZP25189 248 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 WNT4P56705 351 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 ACTG1P63261 375 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 KLRD1Q13241 179 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 MED22Q15528 200 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 KISS1Q15726 138 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 GDPD3Q7L5L3 318 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 ZSCAN4Q8NAM6 433 aaPredicted RBP9.11□□□□□ -0.95
DDB1-222ENST00000543627 OR51A2Q8NGJ7 313 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 RGP1Q92546 391 aaPredicted RBP9.11□□□□□ -0.95
DDB1-222ENST00000543627 SGCDQ92629 289 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 TMEM106AQ96A25 262 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 DACT3Q96B18 629 aaPredicted RBP9.11□□□□□ -0.95
DDB1-222ENST00000543627 SMIM19Q96E16 107 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 SDSLQ96GA7 329 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 SIRPDQ9H106 197 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 C19orf12Q9NSK7 152 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 TPRKBQ9Y3C4 175 aa9.11□□□□□ -0.95
DDB1-222ENST00000543627 A0A0A6YYJ9 748 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 IGKV1-12A0A0C4DH73 117 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 H0YJX3 145 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 IGKV1D-12P01611 117 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms