RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 DHDHQ9UQ10 334 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 FAM96BQ9Y3D0 163 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 MAB21L2Q9Y586 359 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 MMP24Q9Y5R2 645 aa5.28□□□□□ -1.56
USP54-202ENST00000413442 FAM230AA0A1W2PPH8 454 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 A0A1W2PQ09 198 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 hADV38S2A0JD32 116 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 BTBD17A6NE02 478 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 C22orf46C9J442 243 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 M0R129 80 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MGST3O14880 152 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MAGEB4O15481 346 aaPredicted RBP5.27□□□□□ -1.57
USP54-202ENST00000413442 SULT1B1O43704 296 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RHBDL1O75783 438 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 KDM4BO94953 1096 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ZFPL1O95159 310 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 VENTXO95231 258 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 CRYBA1P05813 215 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 CSN2P05814 226 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 LIMS3P0CW19 117 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 LIMS4P0CW20 117 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 NDUFB7P17568 137 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 EGR1P18146 543 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RAB3AP20336 220 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ANOS1P23352 680 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MAPK3P27361 379 aaPredicted RBP5.27□□□□□ -1.57
USP54-202ENST00000413442 KIR3DL2P43630 455 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MTNR1BP49286 362 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ERVFRD-1P60508 538 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ARF6P62330 175 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RPL31P62899 125 aaKnown RBP5.27□□□□□ -1.57
USP54-202ENST00000413442 UBA52P62987 128 aaKnown RBP5.27□□□□□ -1.57
USP54-202ENST00000413442 PAX5Q02548 391 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ST3GAL4Q11206 333 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RIPK1Q13546 671 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 TRAM1Q15629 374 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ZNF529Q6P280 563 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 C11orf88Q6PI97 169 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ASCL4Q6XD76 172 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 GDPGP1Q6ZNW5 385 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 SLC16A12Q6ZSM3 486 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 GDPD3Q7L5L3 318 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 LINC00596Q86U02 117 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 LDLRAD3Q86YD5 345 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 PHC2Q8IXK0 858 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 OR8H2Q8N162 312 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ZDHHC22Q8N966 263 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 OR5T2Q8NGG2 359 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 SGMS2Q8NHU3 365 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 CYGBQ8WWM9 190 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 PHYHIPQ92561 330 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 DYRK2Q92630 601 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 CORO2AQ92828 525 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 FOXRED1Q96CU9 486 aaPredicted RBP5.27□□□□□ -1.57
USP54-202ENST00000413442 SMIM19Q96E16 107 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 SLITRK2Q9H156 845 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MEGF9Q9H1U4 602 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 WDR13Q9H1Z4 485 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RASSF4Q9H2L5 321 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 SMURF1Q9HCE7 757 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 HMG20AQ9NP66 347 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RAB18Q9NP72 206 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 RAB9BQ9NP90 201 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ISYNA1Q9NPH2 558 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 GPR173Q9NS66 373 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 TAS2R3Q9NYW6 316 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MTCH1Q9NZJ7 389 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 CKLFQ9UBR5 152 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 GHRLQ9UBU3 117 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 PSORS1C1Q9UIG5 152 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 FOXJ3Q9UPW0 622 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ERGIC3Q9Y282 383 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 MYRFQ9Y2G1 1151 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 ZNF281Q9Y2X9 895 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
USP54-202ENST00000413442 TPRKBQ9Y3C4 175 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 JMJD1CQ15652 2540 aa5.27□□□□□ -1.57
USP54-202ENST00000413442 TRAV40A0A0B4J280 105 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 C17orf98A8MV24 154 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 H0YHG0 523 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 SYNGR1O43759 233 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 MRPS14O60783 128 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 GLAP06280 429 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 GZMHP20718 246 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 PSMA1P25786 263 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 LGALS4P56470 323 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 NANOS3P60323 173 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 PPP3R1P63098 170 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 ELF3P78545 371 aaPredicted RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 IKZF1Q13422 519 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 CDK5R1Q15078 307 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 KISS1Q15726 138 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 DGUOKQ16854 277 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 LRRC36Q1X8D7 754 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 Q499Y3 187 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 NHLRC3Q5JS37 347 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 LIAT1Q6ZQX7 453 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 SLC25A26Q70HW3 274 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 RTN4RL2Q86UN3 420 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 ANGPTL5Q86XS5 388 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms