RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Eps8l3Q91WL0 600 aa12.94□□□□□ -0.34
Nup88-202ENSMUST00000108530 Park7Q99LX0 189 aaKnown RBP12.94□□□□□ -0.34
Nup88-202ENSMUST00000108530 Tpra1Q99MU1 369 aa12.94□□□□□ -0.34
Nup88-202ENSMUST00000108530 Nkiras2Q9CR56 191 aa12.94□□□□□ -0.34
Nup88-202ENSMUST00000108530 Phf19Q9CXG9 578 aa12.94□□□□□ -0.34
Nup88-202ENSMUST00000108530 Tex44Q9DA60 530 aa12.94□□□□□ -0.34
Nup88-202ENSMUST00000108530 Igkv6-23A0A140T8N5 115 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr746E9Q840 314 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Smim22J3QP37 91 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 CtdsplP58465 276 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Treml4Q3LRV9 263 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 SprQ64105 261 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Phf21aQ6ZPK0 659 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Vmn1r72Q8K3N7 306 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr578Q8VH17 313 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Xrcc2Q9CX47 278 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Dock11A2AF47 2073 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm28897A0A087WP44 222 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Prss47A0A0N4SVQ0 395 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 A0A1L1SR50 188 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 4930563M21RikA0A1L1SUT5 578 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm13178B1AVU7 408 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr68E9PYY2 315 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 H2-M11F6U8V3 335 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Sc5dO88822 299 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 PitpnbP53811 271 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Spata22Q5SV06 358 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gpank1Q61858 372 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Sla2Q8R4L0 259 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 NosipQ9D6T0 301 aaKnown RBP12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Dnajc4Q9D844 244 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Fscn3Q9QXW4 498 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 ChrdQ9Z0E2 948 aa12.93□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm7929A0A286YDV3 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Slc25a53A2AF28 346 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm13769A2ATW2 309 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm5901D3YVJ1 333 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm21977F6U3N7 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8247F6VRJ8 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8005F6YKY3 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm3015F6ZAP6 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8212F6ZMY5 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm7954F7BAX1 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8138F7BY56 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8232F7CFJ3 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 H2-M1F7CXU4 344 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm17079F7D8Y4 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Vmn2r30K7N5W1 852 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8165L7N218 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm8122L7N2C7 213 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm17078M0QW51 211 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Arf1P84078 181 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 UqcrhP99028 89 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 PilrbQ2YFS2 224 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 H2-M2Q6W9L1 343 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Prss43Q76HL1 382 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Zfp955aQ80XR7 545 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Zer1Q80ZJ6 779 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Galnt6Q8C7U7 622 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Agpat2Q8K3K7 278 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Trib3Q8K4K2 354 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr1450Q8VF19 325 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr1122Q8VGT9 326 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 TipinQ91WA1 278 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Slc2a8Q9JIF3 477 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Unc119Q9Z2R6 240 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm15446D3Z5Y8 553 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 P06344 263 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Igf2P09535 180 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Acyp2P56375 106 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Bcl2l2P70345 193 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Prr27Q3SYJ2 352 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Fbxw16Q497Z0 464 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Slc25a47Q6IS41 310 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr804Q7TRH7 314 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Henmt1Q8CAE2 395 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Tceal6Q9DB24 200 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Slc15a1Q9JIP7 709 aa12.92□□□□□ -0.34
Nup88-202ENSMUST00000108530 Scml2B1AVB3 969 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Itga5P11688 1053 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Itgb2P11835 771 aaKnown RBP12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Slc7a10P63115 530 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Atf1P81269 269 aaKnown RBP12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Milr1Q3TB92 246 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Zfp729aQ4QQP3 973 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Opa3Q505D7 179 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Rbm38Q62176 237 aaKnown RBP12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 SrmQ64674 302 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Rab35Q6PHN9 201 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Parp16Q7TMM8 322 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Igsf21Q7TNR6 468 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Olfr1113Q7TR54 326 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Kbtbd11Q8BNW9 633 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Cmtm4Q8CJ61 208 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Tmem175Q9CXY1 499 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 NgfrQ9Z0W1 417 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Pcdhgb8A0A140LI48 931 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Ndufaf5A2APY7 343 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Gm14444A2ARW3 426 aa12.91□□□□□ -0.34
Nup88-202ENSMUST00000108530 Enpp7D3Z6V6 446 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms