Protein–RNA interactions for Protein: Q99MU1

Tpra1, Transmembrane protein adipocyte-associated 1, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpra1Q99MU1 Gm25239-201ENSMUST00000174915 86 ntBASIC33.06■■■□□ 2.88
Tpra1Q99MU1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Tpra1Q99MU1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Tpra1Q99MU1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Tpra1Q99MU1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tpra1Q99MU1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Tpra1Q99MU1 Gm15042-201ENSMUST00000120212 883 ntBASIC29■■■□□ 2.23
Tpra1Q99MU1 Gm24109-201ENSMUST00000175489 103 ntBASIC28.59■■■□□ 2.17
Tpra1Q99MU1 Gm15045-201ENSMUST00000117359 883 ntBASIC28.3■■■□□ 2.12
Tpra1Q99MU1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Tpra1Q99MU1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tpra1Q99MU1 Psd-208ENSMUST00000224556 2034 ntBASIC28.11■■■□□ 2.09
Tpra1Q99MU1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tpra1Q99MU1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Tpra1Q99MU1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Tpra1Q99MU1 Gm23366-201ENSMUST00000175022 89 ntBASIC27.67■■■□□ 2.02
Tpra1Q99MU1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tpra1Q99MU1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Tpra1Q99MU1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Tpra1Q99MU1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Tpra1Q99MU1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tpra1Q99MU1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.04■■□□□ 1.92
Tpra1Q99MU1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Tpra1Q99MU1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tpra1Q99MU1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Tpra1Q99MU1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Tpra1Q99MU1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Tpra1Q99MU1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Tpra1Q99MU1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Tpra1Q99MU1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.65■■□□□ 1.86
Tpra1Q99MU1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Tpra1Q99MU1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.48■■□□□ 1.83
Tpra1Q99MU1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tpra1Q99MU1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Tpra1Q99MU1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Tpra1Q99MU1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
Tpra1Q99MU1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Tpra1Q99MU1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.29■■□□□ 1.8
Tpra1Q99MU1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tpra1Q99MU1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tpra1Q99MU1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tpra1Q99MU1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tpra1Q99MU1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.14■■□□□ 1.78
Tpra1Q99MU1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tpra1Q99MU1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tpra1Q99MU1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.09■■□□□ 1.77
Tpra1Q99MU1 Gm25238-201ENSMUST00000174914 89 ntBASIC26.03■■□□□ 1.76
Tpra1Q99MU1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Tpra1Q99MU1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Tpra1Q99MU1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Tpra1Q99MU1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.79■■□□□ 1.72
Tpra1Q99MU1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tpra1Q99MU1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.75■■□□□ 1.71
Tpra1Q99MU1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Tpra1Q99MU1 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.72■■□□□ 1.71
Tpra1Q99MU1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tpra1Q99MU1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Tpra1Q99MU1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Tpra1Q99MU1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tpra1Q99MU1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Tpra1Q99MU1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tpra1Q99MU1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.51■■□□□ 1.67
Tpra1Q99MU1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Tpra1Q99MU1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tpra1Q99MU1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Tpra1Q99MU1 Gm27325-201ENSMUST00000175467 74 ntBASIC25.39■■□□□ 1.66
Tpra1Q99MU1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Tpra1Q99MU1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.29■■□□□ 1.64
Tpra1Q99MU1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tpra1Q99MU1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.22■■□□□ 1.63
Tpra1Q99MU1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Tpra1Q99MU1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tpra1Q99MU1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Tpra1Q99MU1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.1■■□□□ 1.61
Tpra1Q99MU1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tpra1Q99MU1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Tpra1Q99MU1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.07■■□□□ 1.6
Tpra1Q99MU1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tpra1Q99MU1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Tpra1Q99MU1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tpra1Q99MU1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tpra1Q99MU1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25■■□□□ 1.59
Tpra1Q99MU1 Gm25262-201ENSMUST00000174934 133 ntBASIC24.98■■□□□ 1.59
Tpra1Q99MU1 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.96■■□□□ 1.59
Tpra1Q99MU1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Tpra1Q99MU1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tpra1Q99MU1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tpra1Q99MU1 Rab21-202ENSMUST00000218831 843 ntBASIC24.91■■□□□ 1.58
Tpra1Q99MU1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tpra1Q99MU1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tpra1Q99MU1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
Tpra1Q99MU1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Tpra1Q99MU1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.83■■□□□ 1.57
Tpra1Q99MU1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Tpra1Q99MU1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Tpra1Q99MU1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Tpra1Q99MU1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tpra1Q99MU1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Tpra1Q99MU1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.67■■□□□ 1.54
Tpra1Q99MU1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms