Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Gm28897A0A087WP44 Gm25239-201ENSMUST00000174915 86 ntBASIC29.38■■■□□ 2.29
Gm28897A0A087WP44 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Gm28897A0A087WP44 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Gm28897A0A087WP44 Psd-208ENSMUST00000224556 2034 ntBASIC28■■■□□ 2.07
Gm28897A0A087WP44 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Gm28897A0A087WP44 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Gm28897A0A087WP44 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Gm28897A0A087WP44 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Gm28897A0A087WP44 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Gm28897A0A087WP44 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Gm28897A0A087WP44 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Gm28897A0A087WP44 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Gm28897A0A087WP44 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Gm28897A0A087WP44 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Gm28897A0A087WP44 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Gm28897A0A087WP44 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.47■■□□□ 1.83
Gm28897A0A087WP44 Gm15042-201ENSMUST00000120212 883 ntBASIC26.46■■□□□ 1.83
Gm28897A0A087WP44 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Gm28897A0A087WP44 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Gm28897A0A087WP44 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Gm28897A0A087WP44 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Gm28897A0A087WP44 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Gm28897A0A087WP44 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
Gm28897A0A087WP44 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Gm28897A0A087WP44 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Gm28897A0A087WP44 Gm15045-201ENSMUST00000117359 883 ntBASIC25.93■■□□□ 1.74
Gm28897A0A087WP44 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Gm28897A0A087WP44 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Gm28897A0A087WP44 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Gm28897A0A087WP44 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Gm28897A0A087WP44 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Gm28897A0A087WP44 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Gm28897A0A087WP44 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.58■■□□□ 1.69
Gm28897A0A087WP44 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.58■■□□□ 1.68
Gm28897A0A087WP44 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.57■■□□□ 1.68
Gm28897A0A087WP44 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm28897A0A087WP44 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm28897A0A087WP44 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Gm28897A0A087WP44 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.39■■□□□ 1.66
Gm28897A0A087WP44 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Gm28897A0A087WP44 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm28897A0A087WP44 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Gm28897A0A087WP44 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm28897A0A087WP44 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm28897A0A087WP44 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm28897A0A087WP44 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.21■■□□□ 1.63
Gm28897A0A087WP44 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.18■■□□□ 1.62
Gm28897A0A087WP44 Gm24109-201ENSMUST00000175489 103 ntBASIC25.1■■□□□ 1.61
Gm28897A0A087WP44 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Gm28897A0A087WP44 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.05■■□□□ 1.6
Gm28897A0A087WP44 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Gm28897A0A087WP44 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Gm28897A0A087WP44 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Gm28897A0A087WP44 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Gm28897A0A087WP44 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Gm28897A0A087WP44 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gm28897A0A087WP44 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Gm28897A0A087WP44 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Gm28897A0A087WP44 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Gm28897A0A087WP44 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Gm28897A0A087WP44 Gm23366-201ENSMUST00000175022 89 ntBASIC24.7■■□□□ 1.54
Gm28897A0A087WP44 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Gm28897A0A087WP44 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Gm28897A0A087WP44 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.59■■□□□ 1.53
Gm28897A0A087WP44 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm28897A0A087WP44 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm28897A0A087WP44 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm28897A0A087WP44 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Gm28897A0A087WP44 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gm28897A0A087WP44 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Gm28897A0A087WP44 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm28897A0A087WP44 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm28897A0A087WP44 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm28897A0A087WP44 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm28897A0A087WP44 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.39■■□□□ 1.5
Gm28897A0A087WP44 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm28897A0A087WP44 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm28897A0A087WP44 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.35■■□□□ 1.49
Gm28897A0A087WP44 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm28897A0A087WP44 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm28897A0A087WP44 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Gm28897A0A087WP44 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Gm28897A0A087WP44 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm28897A0A087WP44 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm28897A0A087WP44 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm28897A0A087WP44 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Gm28897A0A087WP44 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Gm28897A0A087WP44 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Gm28897A0A087WP44 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Gm28897A0A087WP44 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Gm28897A0A087WP44 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Gm28897A0A087WP44 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Gm28897A0A087WP44 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm28897A0A087WP44 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm28897A0A087WP44 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Gm28897A0A087WP44 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
Gm28897A0A087WP44 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm28897A0A087WP44 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm28897A0A087WP44 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms