RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CBR1P16152 277 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 ADH6P28332 368 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 FCGR2CP31995 323 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 PPT1P50897 306 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 TAS2R46P59540 309 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 EIF5AP63241 154 aaKnown RBP15.35■□□□□ 0.05
SCARF1-205ENST00000571272 BTNL8Q6UX41 500 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 DOK3Q7L591 496 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 FAM71E2Q8N5Q1 922 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 SECTM1Q8WVN6 248 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 EMG1Q92979 244 aaKnown RBP15.35■□□□□ 0.05
SCARF1-205ENST00000571272 HDHD3Q9BSH5 251 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-205ENST00000571272 PECRQ9BY49 303 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 CNTNAP3Q9BZ76 1288 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 RAB33BQ9H082 229 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 MEMO1Q9Y316 297 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 A0A1W2PNV4 684 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 F5H5K5 113 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 TRAF3IP2O43734 574 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-205ENST00000571272 EIF3GO75821 320 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCARF1-205ENST00000571272 GLAP06280 429 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 SULT1A2P50226 295 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 FAM69BQ5VUD6 431 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 C6orf201Q7Z4U5 140 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 PLPP5Q8NEB5 264 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 TSTD1Q8NFU3 115 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 DMBX1Q8NFW5 382 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 OR14K1Q8NGZ2 314 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 PGAM5Q96HS1 289 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 KIRREL1Q96J84 757 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 WDFY3Q8IZQ1 3526 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 ADAMTS9Q9P2N4 1935 aa15.35■□□□□ 0.05
SCARF1-205ENST00000571272 TRBV11-1A0A0K0K1C0 115 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 FIGNL2A6NMB9 653 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 ZNF205O95201 554 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 IFNA2P01563 188 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 TMEM33P57088 247 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 SMAD4Q13485 552 aaKnown RBP15.34■□□□□ 0.05
SCARF1-205ENST00000571272 DTX1Q86Y01 620 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 PLXDC1Q8IUK5 500 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 ZNF2Q9BSG1 426 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-205ENST00000571272 TAAR5O14804 337 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 CST4P01036 141 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 APOC1P02654 83 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 FAHP16930 419 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 HABP2Q14520 560 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-205ENST00000571272 PLPPR5Q32ZL2 321 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 SLC25A47Q6Q0C1 308 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 CRIP3Q6Q6R5 217 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 FAM89BQ8N5H3 189 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 SEMA6DQ8NFY4 1073 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 C1orf123Q9NWV4 160 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 DHRS7CA6NNS2 312 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 CPT2P23786 658 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 GABRR1P24046 479 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 CD27P26842 260 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 TGIF1Q15583 401 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 TMEM268Q5VZI3 342 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 OR10G3Q8NGC4 313 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 PIGTQ969N2 578 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 ZNF501Q96CX3 271 aaPredicted RBP15.34■□□□□ 0.05
SCARF1-205ENST00000571272 LYZL4Q96KX0 146 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 RPS10P5Q9NQ39 176 aa15.34■□□□□ 0.05
SCARF1-205ENST00000571272 MCTS1Q9ULC4 181 aaKnown RBP15.34■□□□□ 0.05
SCARF1-205ENST00000571272 C2CD4DB7Z1M9 353 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 FCGR2AP12318 317 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF43P17038 809 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 SUMO3P55854 103 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-205ENST00000571272 HNRNPKP61978 463 aaKnown RBP eCLIP15.33■□□□□ 0.04
SCARF1-205ENST00000571272 UBE2V2Q15819 145 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 OGFOD3Q6PK18 319 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 SLC38A9Q8NBW4 561 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 FNDC9Q8TBE3 224 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 SSC4DQ8WTU2 575 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 S100A13Q99584 98 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 METTL7AQ9H8H3 244 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 SMCO4Q9NRQ5 59 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 ZNF726A6NNF4 738 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 PRSS44E7EML9 344 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 ACAA1P09110 424 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-205ENST00000571272 LTBRP36941 435 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 ANKRD37Q7Z713 158 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 SULF2Q8IWU5 870 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 SKA3Q8IX90 412 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 RHBDD1Q8TEB9 315 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 MRPL24Q96A35 216 aaKnown RBP15.33■□□□□ 0.04
SCARF1-205ENST00000571272 FBXO17Q96EF6 278 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 MRGPRX4Q96LA9 322 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 FANCFQ9NPI8 374 aa15.33■□□□□ 0.04
SCARF1-205ENST00000571272 DUX1O43812 170 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 HEXBP07686 556 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 CCL1P22362 96 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 CSNK1EP49674 416 aaKnown RBP15.32■□□□□ 0.04
SCARF1-205ENST00000571272 DVL1P1P54792 670 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-205ENST00000571272 RAB5BP61020 215 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 FAM189A2Q15884 450 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 NFAM1Q8NET5 270 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-205ENST00000571272 LILRB1Q8NHL6 650 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-205ENST00000571272 ERGIC1Q969X5 290 aa15.32■□□□□ 0.04
SCARF1-205ENST00000571272 BSCL2Q96G97 398 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms