RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 MRPL41Q8IXM3 137 aaKnown RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 CCDC54Q8NEL0 328 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 RPS4Y2Q8TD47 263 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 REEP6Q96HR9 211 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 MOB1AQ9H8S9 216 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 GHRLQ9UBU3 117 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 MED12Q93074 2177 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 FIGNL2A6NMB9 653 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 GPR37O15354 613 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 CDC14BO60729 498 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 BCKDHBP21953 392 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 TFF2Q03403 129 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 SHISA5Q8N114 240 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 FGF11Q92914 225 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 LIN37Q96GY3 246 aaPredicted RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 DNAJB11Q9UBS4 358 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 IGKV1D-42A0A075B6H8 117 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 IGHV5-51A0A0C4DH38 117 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 SPRY1O43609 319 aaPredicted RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 LY86O95711 162 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 OR2A2Q6IF42 318 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 MCHR2Q969V1 340 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 CASP8AP2Q9UKL3 1982 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 CEBPZOSA8MTT3 80 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 ZNF587BE7ETH6 402 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 M0R135 149 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 PHOX2AO14813 284 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
USB1-212ENST00000566082 CFIP05156 583 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 RAB1AP62820 205 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 SLC35A1P78382 337 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 DHODHQ02127 395 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 PNLIPRP3Q17RR3 467 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 OR2T2Q6IF00 324 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 DEGS2Q6QHC5 323 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 OR8U1Q8NH10 309 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 OR51H1Q8NH63 302 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 C8orf44Q96CB5 159 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 ZNF799Q96GE5 643 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 SLC35B3Q9H1N7 401 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 C8orf33Q9H7E9 229 aaPredicted RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 SRPK3Q9UPE1 567 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 STRAPQ9Y3F4 350 aaKnown RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 ALG1L2C9J202 215 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 AP4M1O00189 453 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 RAB5AP20339 215 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 GSK3AP49840 483 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 PLP2Q04941 152 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 SRYQ05066 204 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 TGIF1Q15583 401 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 ZSCAN4Q8NAM6 433 aaPredicted RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 NECAP1Q8NC96 275 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 PHOSPHO2Q8TCD6 241 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 ST8SIA1Q92185 356 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 TIMP4Q99727 224 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 MRPL22Q9NWU5 206 aaKnown RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 CA14Q9ULX7 337 aa9.36□□□□□ -0.91
USB1-212ENST00000566082 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
USB1-212ENST00000566082 TRBV23-1A0A0A0MS06 115 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 A0A1B0GX78 115 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 SERPINE3A8MV23 424 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 C1QL1O75973 258 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 FUT7Q11130 342 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MRPL21Q7Z2W9 205 aaKnown RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 HPSE2Q8WWQ2 592 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 GPX7Q96SL4 187 aaPredicted RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 FAAP24Q9BTP7 215 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 PRO1933Q9H354 126 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 CRLF2Q9HC73 371 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 IGHV3-15A0A0B4J1V0 119 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 SPTY2D1-AS1A0A0U1RR47 76 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 RNF222A6NCQ9 220 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 HSD17B6O14756 317 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 ONECUT2O95948 504 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MYF5P13349 255 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MSR1P21757 451 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 FASLGP48023 281 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 ARF1P84077 181 aaKnown RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 MGAT2Q10469 447 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MYBPHQ13203 477 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 ZNF658BQ4V348 819 aaPredicted RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 SLC16A14Q7RTX9 510 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 WDR5BQ86VZ2 330 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 C1orf87Q8N0U7 546 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 AKR7LQ8NHP1 331 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MRPL24Q96A35 216 aaKnown RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 WDR13Q9H1Z4 485 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 PLK3Q9H4B4 646 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 ANKRD10Q9NXR5 420 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MRPS17Q9Y2R5 130 aaKnown RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 NSG1A0A0A6YYJ2 146 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 FOXS1O43638 330 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 GPR137BO60478 399 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 HLA-HP01893 362 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 BGLAPP02818 100 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 OR5AC1P0C628 307 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms