RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FAM46BQ96A09 425 aa9.36□□□□□ -0.91
PKP4-206ENST00000452162 C1orf147Q96MC9 270 aaPredicted RBP9.36□□□□□ -0.91
PKP4-206ENST00000452162 GPR137Q96N19 417 aa9.36□□□□□ -0.91
PKP4-206ENST00000452162 RANBP3Q9H6Z4 567 aaPredicted RBP9.36□□□□□ -0.91
PKP4-206ENST00000452162 ZNF703Q9H7S9 590 aaPredicted RBP9.36□□□□□ -0.91
PKP4-206ENST00000452162 DLL4Q9NR61 685 aa9.36□□□□□ -0.91
PKP4-206ENST00000452162 ZNF107Q9UII5 783 aaPredicted RBP9.36□□□□□ -0.91
PKP4-206ENST00000452162 METTL21EPA6NDL7 271 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 TMEM235A6NFC5 223 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 SNRPGP15A8MWD9 76 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 VSIG10L2P0DP72 767 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 GFOD2Q3B7J2 385 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 AWAT2Q6E213 333 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 AAED1Q7RTV5 226 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 ANGPTL5Q86XS5 388 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 GPR137CQ8N3F9 429 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 ST6GALNAC3Q8NDV1 305 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 OR11H4Q8NGC9 324 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 DVL3Q92997 716 aaPredicted RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 NUDT16L1Q9BRJ7 211 aaKnown RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 GINS4Q9BRT9 223 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 ZNF436Q9C0F3 470 aaPredicted RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 ZDHHC11Q9H8X9 412 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 LIPGQ9Y5X9 500 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 V9GYS6 101 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 IGKV1-9A0A0C4DH69 117 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 F5H5K5 113 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 G3V3Q6 166 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 CYTIPO60759 359 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 ZNF780AO75290 641 aaPredicted RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 CD74P04233 296 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 FCER2P06734 321 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 MELTFP08582 738 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 CPN1P15169 458 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 CRYGSP22914 178 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 SNRPD2P62316 118 aaKnown RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 EIF2S3LQ2VIR3 472 aaKnown RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 GFRALQ6UXV0 394 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 NLRC3Q7RTR2 1065 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 OR2W3Q7Z3T1 314 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 FAM109AQ8N4B1 249 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 SPICQ8N5J4 248 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 OR8S1Q8NH09 359 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 CMBLQ96DG6 245 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 ZMAT3Q9HA38 289 aaKnown RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 TMEM38BQ9NVV0 291 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 SCP2D1Q9UJQ7 156 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 MRPS28Q9Y2Q9 187 aaKnown RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 HSPB11Q9Y547 144 aa9.35□□□□□ -0.91
PKP4-206ENST00000452162 USP9XQ93008 2570 aaPredicted RBP9.35□□□□□ -0.91
PKP4-206ENST00000452162 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 M0R135 149 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 SCGNO76038 276 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 HPNP05981 417 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 DBHP09172 617 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 CST2P09228 141 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 THBS4P35443 961 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 OR3A4PP47883 348 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 RAB35Q15286 201 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 KRTCAP3Q53RY4 240 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 CRIP3Q6Q6R5 217 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 CPNE4Q96A23 557 aaPredicted RBP9.34□□□□□ -0.91
PKP4-206ENST00000452162 ZNF799Q96GE5 643 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 ZNF845Q96IR2 970 aaPredicted RBP9.34□□□□□ -0.91
PKP4-206ENST00000452162 CRLF2Q9HC73 371 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 GPN1Q9HCN4 374 aaPredicted RBP9.34□□□□□ -0.91
PKP4-206ENST00000452162 PLEK2Q9NYT0 353 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 MGAT4AQ9UM21 535 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 SYNGR3O43761 229 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
PKP4-206ENST00000452162 DHRS3O75911 302 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 RAB3DO95716 219 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 APOC1P02654 83 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 PRF1P14222 555 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 SLC6A9P48067 706 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 GSK3AP49840 483 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 SLC10A1Q14973 349 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 RIPPLY2Q5TAB7 128 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 GLIPR1L1Q6UWM5 242 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 FJX1Q86VR8 437 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
PKP4-206ENST00000452162 SPTSSAQ969W0 71 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 TINAGL1Q9GZM7 467 aaPredicted RBP9.34□□□□□ -0.91
PKP4-206ENST00000452162 LPAR5Q9H1C0 372 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 ZNF69Q9UC07 566 aa9.34□□□□□ -0.91
PKP4-206ENST00000452162 A0A0A6YYD4 124 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 M0QYG6 137 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 CYB5AP00167 134 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 HCKP08631 526 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 LHX2P50458 406 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 ECH1Q13011 328 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 KRTAP27-1Q3LI81 207 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 CDNFQ49AH0 187 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 CCDC54Q8NEL0 328 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 OR10R2Q8NGX6 335 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 ABHD3Q8WU67 409 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms