RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ART3Q13508 389 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 TFDP2Q14188 446 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 FAM83EQ2M2I3 478 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 RWDD4Q6NW29 188 aaKnown RBP3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR2W3Q7Z3T1 314 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR51G1Q8NGK1 321 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 LRRC29Q8WV35 223 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZBED3Q96IU2 234 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 FAM210BQ96KR6 192 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF317Q96PQ6 595 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 TM6SF2Q9BZW4 377 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 COA1Q9GZY4 146 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 ADAMTS9Q9P2N4 1935 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 MROH7Q68CQ1 1323 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 A0A0C4DFX4 3053 aa3.59□□□□□ -1.84
HMGB1P3-201ENST00000502802 CDK5RAP2Q96SN8 1893 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 RANBP2P49792 3224 aaKnown RBP3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 IGHV3-64DA0A0J9YX35 117 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 FAM166BA8MTA8 275 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 TRIM49D1C9J1S8 452 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 H3BN98 237 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 GABRPO00591 440 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 RAB5AP20339 215 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 CSKP41240 450 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 FABP6P51161 128 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZNF136P52737 540 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 HADHBP55084 474 aaKnown RBP3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 RCAN2Q14206 197 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 CHRFAM7AQ494W8 412 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 DNAJC24Q6P3W2 148 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 ARL9Q6T311 187 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 FBXW12Q6X9E4 464 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 SPAG16Q8N0X2 631 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 ARRDC1Q8N5I2 433 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 SPERTQ8NA61 448 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 GATSQ8NAP1 163 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 DUSP18Q8NEJ0 188 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 NOXO1Q8NFA2 376 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR10AD1Q8NGE0 317 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR10G4Q8NGN3 311 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 KIR3DX1Q9H7L2 352 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 ADA2Q9NZK5 511 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 RPS6KB2Q9UBS0 482 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 MYO3BQ8WXR4 1341 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 SSC5DA1L4H1 1573 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 SZT2Q5T011 3432 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 PHIPQ8WWQ0 1821 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 ATAD5Q96QE3 1844 aa3.58□□□□□ -1.84
HMGB1P3-201ENST00000502802 COL6A3P12111 3177 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 IGHV3-74A0A0B4J1X5 117 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 SYCE1LA8MT33 242 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 KLLNB2CW77 178 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 H7C1H1 209 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 H7C417 338 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 POLR1CO15160 346 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 NVLO15381 856 aaKnown RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 CDC40O60508 579 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 NEMFO60524 1076 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 CA11O75493 328 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 GABARAPO95166 117 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 SLC25A27O95847 323 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 COL1A1P02452 1464 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 CATP04040 527 aaKnown RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 HOXC4P09017 264 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 ERGP11308 486 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 GFAPP14136 432 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 RAB3AP20336 220 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 DEKP35659 375 aaKnown RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 UBE2AP49459 152 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 P2RX1P51575 399 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 PPP1CBP62140 327 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 PRR3P79522 188 aaKnown RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 KRTAP1-1Q07627 177 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 CAPRIN1Q14444 709 aaKnown RBP3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZNF266Q14584 549 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 GINS1Q14691 196 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 MPPED2Q15777 294 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 STK11Q15831 433 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 GCSAMLQ5JQS6 135 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 METTL21CQ5VZV1 264 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 PRMT9Q6P2P2 845 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 C11orf53Q8IXP5 236 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 OTUD6BQ8N6M0 293 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 TRIML2Q8N7C3 387 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR5AR1Q8NGP9 310 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZNF596Q8TC21 504 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 DOCK2Q92608 1830 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 NTAN1Q96AB6 310 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 MRGPRFQ96AM1 343 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 FAM131CQ96AQ9 280 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 MSANTD3Q96H12 275 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 RNF145Q96MT1 663 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 ZIM3Q96PE6 472 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 TAAR1Q96RJ0 339 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 AGMATQ9BSE5 352 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 AGPAT3Q9NRZ7 376 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 MTFP1Q9UDX5 166 aa3.57□□□□□ -1.84
HMGB1P3-201ENST00000502802 LOC100506127A0A0U1RQW1 187 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms