RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	OCA1	P50946	238 aa	Predicted RBP	4.12	□□□□□ -1.75
snR17a	snR17a	BTN2	P53286	410 aa		4.12	□□□□□ -1.75
snR17a	snR17a	ERO1	Q03103	563 aa		4.12	□□□□□ -1.75
snR17a	snR17a	DLT1	Q04216	342 aa		4.12	□□□□□ -1.75
snR17a	snR17a	RNH1	Q04740	348 aa		4.12	□□□□□ -1.75
snR17a	snR17a	SMD2	Q06217	110 aa	Known RBP	4.12	□□□□□ -1.75
snR17a	snR17a	MCH5	Q08777	521 aa		4.12	□□□□□ -1.75
snR17a	snR17a	RRI2	Q12348	645 aa		4.12	□□□□□ -1.75
snR17a	snR17a	MSD1	P15179	658 aa	Known RBP	4.11	□□□□□ -1.75
snR17a	snR17a	HNM1	P19807	563 aa		4.11	□□□□□ -1.75
snR17a	snR17a	GFD2	P25370	566 aa	Known RBP	4.11	□□□□□ -1.75
snR17a	snR17a	CYS3	P31373	394 aa	Known RBP	4.11	□□□□□ -1.75
snR17a	snR17a	DEP1	P31385	405 aa		4.11	□□□□□ -1.75
snR17a	snR17a	NGG1	P32494	702 aa		4.11	□□□□□ -1.75
snR17a	snR17a	IME2	P32581	645 aa		4.11	□□□□□ -1.75
snR17a	snR17a	IES5	P40060	125 aa		4.11	□□□□□ -1.75
snR17a	snR17a	NDE1	P40215	560 aa		4.11	□□□□□ -1.75
snR17a	snR17a	HUL4	P40985	892 aa		4.11	□□□□□ -1.75
snR17a	snR17a	STU2	P46675	888 aa		4.11	□□□□□ -1.75
snR17a	snR17a	ATP22	P50273	684 aa	Predicted RBP	4.11	□□□□□ -1.75
snR17a	snR17a	TAN1	P53072	289 aa	Predicted RBP	4.11	□□□□□ -1.75
snR17a	snR17a	YNL247W	P53852	767 aa	Known RBP	4.11	□□□□□ -1.75
snR17a	snR17a	ERG5	P54781	538 aa		4.11	□□□□□ -1.75
snR17a	snR17a	TAP42	Q04372	366 aa		4.11	□□□□□ -1.75
snR17a	snR17a	YDL124W	Q07551	312 aa	Known RBP	4.11	□□□□□ -1.75
snR17a	snR17a	ENV7	Q12003	364 aa		4.11	□□□□□ -1.75
snR17a	snR17a	YRM1	Q12340	786 aa		4.11	□□□□□ -1.75
snR17a	snR17a	APC2	Q12440	853 aa		4.11	□□□□□ -1.75
snR17a	snR17a	CIT1	P00890	479 aa		4.1	□□□□□ -1.75
snR17a	snR17a	TOM70	P07213	617 aa	Known RBP	4.1	□□□□□ -1.75
snR17a	snR17a	PIF1	P07271	859 aa		4.1	□□□□□ -1.75
snR17a	snR17a	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
snR17a	snR17a	CRP1	P38845	465 aa	Known RBP	4.1	□□□□□ -1.75
snR17a	snR17a	VPS41	P38959	992 aa		4.1	□□□□□ -1.75
snR17a	snR17a	YGR125W	P53273	1036 aa		4.1	□□□□□ -1.75
snR17a	snR17a	YNL050C	P53952	270 aa		4.1	□□□□□ -1.75
snR17a	snR17a	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
snR17a	snR17a	RRB1	Q04225	511 aa	Known RBP	4.1	□□□□□ -1.75
snR17a	snR17a	YDR286C	Q05530	114 aa		4.1	□□□□□ -1.75
snR17a	snR17a	RPN7	Q06103	429 aa	Known RBP	4.1	□□□□□ -1.75
snR17a	snR17a	SWA2	Q06677	668 aa		4.1	□□□□□ -1.75
snR17a	snR17a	CDC53	Q12018	815 aa	Known RBP	4.1	□□□□□ -1.75
snR17a	snR17a	RTP1	Q12751	981 aa		4.1	□□□□□ -1.75
snR17a	snR17a	TUB3	P09734	445 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	PET123	P17558	318 aa		4.09	□□□□□ -1.75
snR17a	snR17a	PHO84	P25297	587 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	MRC1	P25588	1096 aa		4.09	□□□□□ -1.75
snR17a	snR17a	HIR1	P32479	840 aa		4.09	□□□□□ -1.75
snR17a	snR17a	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
snR17a	snR17a	STO1	P34160	861 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	KDX1	P36005	433 aa		4.09	□□□□□ -1.75
snR17a	snR17a	RPC37	P36121	282 aa		4.09	□□□□□ -1.75
snR17a	snR17a	RPP1	P38786	293 aa		4.09	□□□□□ -1.75
snR17a	snR17a	YMR124W	P39523	943 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	PZF1	P39933	429 aa		4.09	□□□□□ -1.75
snR17a	snR17a	YER034W	P40022	185 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	ARB1	P40024	610 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	ELO3	P40319	345 aa		4.09	□□□□□ -1.75
snR17a	snR17a	UBP6	P43593	499 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	STB4	P50104	949 aa		4.09	□□□□□ -1.75
snR17a	snR17a	DAM1	P53267	343 aa		4.09	□□□□□ -1.75
snR17a	snR17a	PNG1	Q02890	363 aa		4.09	□□□□□ -1.75
snR17a	snR17a	YPL191C	Q08930	360 aa		4.09	□□□□□ -1.75
snR17a	snR17a	BMS1	Q08965	1183 aa	Known RBP	4.09	□□□□□ -1.75
snR17a	snR17a	NYV1	Q12255	253 aa		4.09	□□□□□ -1.75
snR17a	snR17a	CAF20	P12962	161 aa	Known RBP	4.08	□□□□□ -1.76
snR17a	snR17a	TPM1	P17536	199 aa	Known RBP	4.08	□□□□□ -1.76
snR17a	snR17a	GLK1	P17709	500 aa	Known RBP	4.08	□□□□□ -1.76
snR17a	snR17a	RPB4	P20433	221 aa	Predicted RBP	4.08	□□□□□ -1.76
snR17a	snR17a	DAL7	P21826	554 aa		4.08	□□□□□ -1.76
snR17a	snR17a	MRPL25	P23369	157 aa		4.08	□□□□□ -1.76
snR17a	snR17a	MEF1	P25039	761 aa		4.08	□□□□□ -1.76
snR17a	snR17a	PGS1	P25578	521 aa		4.08	□□□□□ -1.76
snR17a	snR17a	LTV1	P34078	463 aa		4.08	□□□□□ -1.76
snR17a	snR17a	RRN3	P36070	627 aa		4.08	□□□□□ -1.76
snR17a	snR17a	BYE1	P36106	594 aa		4.08	□□□□□ -1.76
snR17a	snR17a	POP2	P39008	433 aa		4.08	□□□□□ -1.76
snR17a	snR17a	VHR1	P40522	640 aa		4.08	□□□□□ -1.76
snR17a	snR17a	SAP185	P40856	1058 aa		4.08	□□□□□ -1.76
snR17a	snR17a	DUS1	P53759	423 aa	Known RBP	4.08	□□□□□ -1.76
snR17a	snR17a	ZDS2	P54786	942 aa		4.08	□□□□□ -1.76
snR17a	snR17a	YMR206W	Q03695	313 aa		4.08	□□□□□ -1.76
snR17a	snR17a	FRE5	Q08908	694 aa		4.08	□□□□□ -1.76
snR17a	snR17a	YOR131C	Q12486	218 aa		4.08	□□□□□ -1.76
snR17a	snR17a	TUF1	P02992	437 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	TOP3	P13099	656 aa		4.07	□□□□□ -1.76
snR17a	snR17a	RME1	P32338	300 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	SMY1	P32364	656 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	DPH2	P32461	534 aa		4.07	□□□□□ -1.76
snR17a	snR17a	EMC3	P36039	253 aa		4.07	□□□□□ -1.76
snR17a	snR17a	EFM2	P38347	419 aa		4.07	□□□□□ -1.76
snR17a	snR17a	SIC1	P38634	284 aa		4.07	□□□□□ -1.76
snR17a	snR17a	OTU2	P38747	307 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	RRF1	P38771	230 aa		4.07	□□□□□ -1.76
snR17a	snR17a	GGA2	P38817	585 aa	Known RBP	4.07	□□□□□ -1.76
snR17a	snR17a	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
snR17a	snR17a	FKH2	P41813	862 aa		4.07	□□□□□ -1.76
snR17a	snR17a	SRB7	P47822	140 aa		4.07	□□□□□ -1.76
snR17a	snR17a	AMA1	P50082	593 aa		4.07	□□□□□ -1.76
snR17a	snR17a	ASI2	P53895	289 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms