RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C SER1P33330 395 aaKnown RBP3.8□□□□□ -1.8
RPC40YPR110C TRZ1P36159 838 aaPredicted RBP3.8□□□□□ -1.8
RPC40YPR110C YHR112CP38716 378 aa3.8□□□□□ -1.8
RPC40YPR110C IES1P43579 692 aa3.8□□□□□ -1.8
RPC40YPR110C SPC105P53148 917 aa3.8□□□□□ -1.8
RPC40YPR110C MRPS35P53292 345 aa3.8□□□□□ -1.8
RPC40YPR110C NOP15P53927 220 aaPredicted RBP3.8□□□□□ -1.8
RPC40YPR110C YMR210WQ03649 449 aa3.8□□□□□ -1.8
RPC40YPR110C CLU1Q03690 1277 aaKnown RBP3.8□□□□□ -1.8
RPC40YPR110C TMA10Q06177 86 aa3.8□□□□□ -1.8
RPC40YPR110C TGL5Q12043 749 aa3.8□□□□□ -1.8
RPC40YPR110C YPR027CQ12079 277 aa3.8□□□□□ -1.8
RPC40YPR110C RPS17AP02407 136 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C PMA1P05030 918 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C PYC1P11154 1178 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C SST2P11972 698 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C RPS17BP14127 136 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C CDC26P14724 124 aa3.79□□□□□ -1.8
RPC40YPR110C ACO1P19414 778 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPC40YPR110C CAD1P24813 409 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C IMG2P25642 146 aaPredicted RBP3.79□□□□□ -1.8
RPC40YPR110C PET127P32606 800 aa3.79□□□□□ -1.8
RPC40YPR110C APT2P36973 181 aa3.79□□□□□ -1.8
RPC40YPR110C BAP3P41815 604 aa3.79□□□□□ -1.8
RPC40YPR110C BUL1P48524 976 aa3.79□□□□□ -1.8
RPC40YPR110C RNR4P49723 345 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C AMA1P50082 593 aa3.79□□□□□ -1.8
RPC40YPR110C MCM6P53091 1017 aaKnown RBP3.79□□□□□ -1.8
RPC40YPR110C GAD1Q04792 585 aa3.79□□□□□ -1.8
RPC40YPR110C PHM6Q05637 104 aa3.79□□□□□ -1.8
RPC40YPR110C PEX15Q08215 383 aa3.79□□□□□ -1.8
RPC40YPR110C VHS3Q08438 674 aa3.79□□□□□ -1.8
RPC40YPR110C KAR1P11927 433 aa3.78□□□□□ -1.8
RPC40YPR110C PFK1P16861 987 aaKnown RBP3.78□□□□□ -1.8
RPC40YPR110C IME1P21190 360 aa3.78□□□□□ -1.8
RPC40YPR110C ATP12P22135 325 aa3.78□□□□□ -1.8
RPC40YPR110C MF(ALPHA)2P32435 120 aa3.78□□□□□ -1.8
RPC40YPR110C SEC6P32844 805 aa3.78□□□□□ -1.8
RPC40YPR110C MPT5P39016 859 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
RPC40YPR110C VID28P40547 921 aa3.78□□□□□ -1.8
RPC40YPR110C YIR042CP40586 236 aa3.78□□□□□ -1.8
RPC40YPR110C FKH2P41813 862 aa3.78□□□□□ -1.8
RPC40YPR110C ENP2P48234 707 aaKnown RBP3.78□□□□□ -1.8
RPC40YPR110C YPS7Q06325 596 aa3.78□□□□□ -1.8
RPC40YPR110C STP4Q07351 490 aa3.78□□□□□ -1.8
RPC40YPR110C ISA1Q07821 250 aaPredicted RBP3.78□□□□□ -1.8
RPC40YPR110C MPD2Q99316 277 aa3.78□□□□□ -1.8
RPC40YPR110C LAT1P12695 482 aaKnown RBP3.77□□□□□ -1.81
RPC40YPR110C FRS1P15624 595 aaKnown RBP3.77□□□□□ -1.81
RPC40YPR110C RNR1P21524 888 aaKnown RBP3.77□□□□□ -1.81
RPC40YPR110C ERG6P25087 383 aaKnown RBP3.77□□□□□ -1.81
RPC40YPR110C HIR1P32479 840 aa3.77□□□□□ -1.81
RPC40YPR110C KTR4P38131 464 aa3.77□□□□□ -1.81
RPC40YPR110C SRP68P38687 599 aaKnown RBP3.77□□□□□ -1.81
RPC40YPR110C UBP5P39944 805 aa3.77□□□□□ -1.81
RPC40YPR110C NSE5Q03718 556 aa3.77□□□□□ -1.81
RPC40YPR110C HRP1Q99383 534 aaKnown RBP3.77□□□□□ -1.81
RPC40YPR110C GLN4P13188 809 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C PEX1P24004 1043 aa3.76□□□□□ -1.81
RPC40YPR110C NIC96P34077 839 aa3.76□□□□□ -1.81
RPC40YPR110C YBR053CP38235 358 aa3.76□□□□□ -1.81
RPC40YPR110C RRP8P38961 392 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C LYS9P38999 446 aa3.76□□□□□ -1.81
RPC40YPR110C HOS4P40480 1083 aa3.76□□□□□ -1.81
RPC40YPR110C RSC8P43609 557 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C IRC5P43610 853 aa3.76□□□□□ -1.81
RPC40YPR110C DAS1P47005 663 aa3.76□□□□□ -1.81
RPC40YPR110C BIT61P47041 543 aa3.76□□□□□ -1.81
RPC40YPR110C NOP9P47077 666 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C MUP1P50276 574 aa3.76□□□□□ -1.81
RPC40YPR110C CNM67P53865 581 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C MET14Q02196 202 aa3.76□□□□□ -1.81
RPC40YPR110C CTK1Q03957 528 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C DLT1Q04216 342 aa3.76□□□□□ -1.81
RPC40YPR110C RRP6Q12149 733 aaKnown RBP3.76□□□□□ -1.81
RPC40YPR110C GAL1P04385 528 aa3.75□□□□□ -1.81
RPC40YPR110C MET3P08536 511 aa3.75□□□□□ -1.81
RPC40YPR110C CAF20P12962 161 aaKnown RBP3.75□□□□□ -1.81
RPC40YPR110C HOP1P20050 605 aa3.75□□□□□ -1.81
RPC40YPR110C HCA4P20448 770 aaKnown RBP3.75□□□□□ -1.81
RPC40YPR110C KCC4P25389 1037 aa3.75□□□□□ -1.81
RPC40YPR110C DGR2P32330 852 aa3.75□□□□□ -1.81
RPC40YPR110C DEF1P35732 738 aaKnown RBP3.75□□□□□ -1.81
RPC40YPR110C DUN1P39009 513 aa3.75□□□□□ -1.81
RPC40YPR110C GET2P40056 285 aa3.75□□□□□ -1.81
RPC40YPR110C ELO3P40319 345 aa3.75□□□□□ -1.81
RPC40YPR110C BUD8P41698 603 aa3.75□□□□□ -1.81
RPC40YPR110C PUS4P48567 403 aaKnown RBP3.75□□□□□ -1.81
RPC40YPR110C PIP2P52960 996 aa3.75□□□□□ -1.81
RPC40YPR110C MTL1P53214 551 aa3.75□□□□□ -1.81
RPC40YPR110C HOL1P53389 586 aa3.75□□□□□ -1.81
RPC40YPR110C RCR2Q03446 210 aaKnown RBP3.75□□□□□ -1.81
RPC40YPR110C ECM38Q05902 660 aaPredicted RBP3.75□□□□□ -1.81
RPC40YPR110C MLC2Q06580 163 aa3.75□□□□□ -1.81
RPC40YPR110C VPS36Q06696 566 aa3.75□□□□□ -1.81
RPC40YPR110C NGL1Q08213 363 aaKnown RBP3.75□□□□□ -1.81
RPC40YPR110C PIF1P07271 859 aa3.74□□□□□ -1.81
RPC40YPR110C ERG20P08524 352 aaKnown RBP3.74□□□□□ -1.81
RPC40YPR110C PRP22P24384 1145 aaKnown RBP3.74□□□□□ -1.81
RPC40YPR110C ERG4P25340 473 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms