RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeast

Gene CSM4, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM4	YPL200W	GET2	P40056	285 aa		4.14	□□□□□ -1.75
CSM4	YPL200W	PAN2	P53010	1115 aa	Predicted RBP	4.14	□□□□□ -1.75
CSM4	YPL200W	GUD1	Q07729	489 aa		4.14	□□□□□ -1.75
CSM4	YPL200W	DCS2	Q12123	353 aa		4.14	□□□□□ -1.75
CSM4	YPL200W	MVD1	P32377	396 aa	Known RBP	4.13	□□□□□ -1.75
CSM4	YPL200W	CUE2	P36075	443 aa	Known RBP	4.13	□□□□□ -1.75
CSM4	YPL200W	SFB3	P38810	929 aa		4.13	□□□□□ -1.75
CSM4	YPL200W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
CSM4	YPL200W	SET2	P46995	733 aa	Known RBP	4.13	□□□□□ -1.75
CSM4	YPL200W	YJR039W	P47107	1121 aa		4.13	□□□□□ -1.75
CSM4	YPL200W	YKL033W-A	Q86ZR7	236 aa		4.13	□□□□□ -1.75
CSM4	YPL200W	ADR1	P07248	1323 aa		4.13	□□□□□ -1.75
CSM4	YPL200W	APN2	P38207	520 aa		4.12	□□□□□ -1.75
CSM4	YPL200W	CBR1	P38626	284 aa	Known RBP	4.12	□□□□□ -1.75
CSM4	YPL200W	YNL195C	P40168	261 aa		4.12	□□□□□ -1.75
CSM4	YPL200W	NOP9	P47077	666 aa	Known RBP	4.12	□□□□□ -1.75
CSM4	YPL200W	YAP1802	P53309	568 aa		4.12	□□□□□ -1.75
CSM4	YPL200W	SDA1	P53313	767 aa	Known RBP	4.12	□□□□□ -1.75
CSM4	YPL200W	SSL2	Q00578	843 aa		4.12	□□□□□ -1.75
CSM4	YPL200W	UTP14	Q04500	899 aa	Known RBP	4.12	□□□□□ -1.75
CSM4	YPL200W	MRH1	Q12117	320 aa	Predicted RBP	4.12	□□□□□ -1.75
CSM4	YPL200W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CSM4	YPL200W	PYC1	P11154	1178 aa	Known RBP	4.11	□□□□□ -1.75
CSM4	YPL200W	PEX1	P24004	1043 aa		4.11	□□□□□ -1.75
CSM4	YPL200W	PHO11	P35842	467 aa		4.11	□□□□□ -1.75
CSM4	YPL200W	PHO12	P38693	467 aa		4.11	□□□□□ -1.75
CSM4	YPL200W	YHR202W	P38887	602 aa		4.11	□□□□□ -1.75
CSM4	YPL200W	COX18	P53239	316 aa		4.11	□□□□□ -1.75
CSM4	YPL200W	ECM3	Q99252	613 aa		4.11	□□□□□ -1.75
CSM4	YPL200W	PEX2	P32800	271 aa		4.1	□□□□□ -1.75
CSM4	YPL200W	CRP1	P38845	465 aa	Known RBP	4.1	□□□□□ -1.75
CSM4	YPL200W	NUG1	P40010	520 aa	Known RBP	4.1	□□□□□ -1.75
CSM4	YPL200W	RSC8	P43609	557 aa	Known RBP	4.1	□□□□□ -1.75
CSM4	YPL200W	YJR096W	P47137	282 aa		4.1	□□□□□ -1.75
CSM4	YPL200W	FHN1	P53279	174 aa		4.1	□□□□□ -1.75
CSM4	YPL200W	SMX3	P54999	86 aa	Predicted RBP	4.1	□□□□□ -1.75
CSM4	YPL200W	ISA1	Q07821	250 aa	Predicted RBP	4.1	□□□□□ -1.75
CSM4	YPL200W	MLH3	Q12083	715 aa		4.1	□□□□□ -1.75
CSM4	YPL200W	UBS1	P38290	277 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	CKB2	P38930	258 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	BEM4	P39011	633 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	YJR142W	P47173	342 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	HLJ1	P48353	224 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	GPD1	Q00055	391 aa	Known RBP	4.09	□□□□□ -1.75
CSM4	YPL200W	THI22	Q06490	572 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	VPS36	Q06696	566 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	ZRT2	Q12436	422 aa		4.09	□□□□□ -1.75
CSM4	YPL200W	GFA1	P14742	717 aa	Known RBP	4.08	□□□□□ -1.76
CSM4	YPL200W	CDC43	P18898	376 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	KIN3	P22209	435 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CSM4	YPL200W	BCS1	P32839	456 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	MAL31	P38156	614 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	TDP1	P38319	544 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	YNR029C	P53729	429 aa	Known RBP	4.08	□□□□□ -1.76
CSM4	YPL200W	THI73	Q07904	523 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	DIA2	Q08496	732 aa	Predicted RBP	4.08	□□□□□ -1.76
CSM4	YPL200W	SUT2	Q12286	268 aa		4.08	□□□□□ -1.76
CSM4	YPL200W	THR1	P17423	357 aa	Known RBP	4.07	□□□□□ -1.76
CSM4	YPL200W	PRP19	P32523	503 aa	Known RBP	4.07	□□□□□ -1.76
CSM4	YPL200W	SEC6	P32844	805 aa		4.07	□□□□□ -1.76
CSM4	YPL200W	YPT7	P32939	208 aa		4.07	□□□□□ -1.76
CSM4	YPL200W	PPZ2	P33329	710 aa		4.07	□□□□□ -1.76
CSM4	YPL200W	NDC80	P40460	691 aa		4.07	□□□□□ -1.76
CSM4	YPL200W	CCT7	P42943	550 aa	Known RBP	4.07	□□□□□ -1.76
CSM4	YPL200W	VPS73	P53142	486 aa	Known RBP	4.07	□□□□□ -1.76
CSM4	YPL200W	VHS3	Q08438	674 aa		4.07	□□□□□ -1.76
CSM4	YPL200W	HCA4	P20448	770 aa	Known RBP	4.06	□□□□□ -1.76
CSM4	YPL200W	IMG2	P25642	146 aa	Predicted RBP	4.06	□□□□□ -1.76
CSM4	YPL200W	YKR075C	P36155	307 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	TYS1	P36421	394 aa	Known RBP	4.06	□□□□□ -1.76
CSM4	YPL200W	BIT2	P38346	545 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	TDA3	P38758	523 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	FPR3	P38911	411 aa	Known RBP	4.06	□□□□□ -1.76
CSM4	YPL200W	RET2	P43621	546 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	ATG4	P53867	494 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	MTQ2	Q03920	221 aa	Predicted RBP	4.06	□□□□□ -1.76
CSM4	YPL200W	YLR407W	Q06070	228 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	TAF3	Q12297	353 aa		4.06	□□□□□ -1.76
CSM4	YPL200W	FRS1	P15624	595 aa	Known RBP	4.05	□□□□□ -1.76
CSM4	YPL200W	PRP28	P23394	588 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	YKU70	P32807	602 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	GLG1	P36143	616 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	YJL206C	P39529	758 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	ARG2	P40360	574 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	BIT61	P47041	543 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	TAH11	P47112	604 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	CTR1	P49573	406 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	USV1	Q12132	391 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	YGR161W-C	Q3E744	92 aa		4.05	□□□□□ -1.76
CSM4	YPL200W	FEN2	P25621	512 aa	Known RBP	4.04	□□□□□ -1.76
CSM4	YPL200W	PET127	P32606	800 aa		4.04	□□□□□ -1.76
CSM4	YPL200W	SET3	P36124	751 aa		4.04	□□□□□ -1.76
CSM4	YPL200W	CCT5	P40413	562 aa	Known RBP	4.04	□□□□□ -1.76
CSM4	YPL200W	PMT3	P47190	753 aa		4.04	□□□□□ -1.76
CSM4	YPL200W	GPG1	P53130	126 aa		4.04	□□□□□ -1.76
CSM4	YPL200W	UME1	Q03010	460 aa		4.04	□□□□□ -1.76
CSM4	YPL200W	RCR2	Q03446	210 aa	Known RBP	4.04	□□□□□ -1.76
CSM4	YPL200W	YMR210W	Q03649	449 aa		4.04	□□□□□ -1.76
CSM4	YPL200W	YPS7	Q06325	596 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 165.7 ms