RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C USV1Q12132 391 aa2.21□□□□□ -2.06
NIP100YPL174C GIN4Q12263 1142 aa2.21□□□□□ -2.06
NIP100YPL174C MDM12Q92328 271 aa2.21□□□□□ -2.06
NIP100YPL174C TDA3P38758 523 aa2.2□□□□□ -2.06
NIP100YPL174C VPS73P53142 486 aaKnown RBP2.2□□□□□ -2.06
NIP100YPL174C ARG5,6Q01217 863 aa2.2□□□□□ -2.06
NIP100YPL174C NUP145P49687 1317 aa2.2□□□□□ -2.06
NIP100YPL174C TUB1P09733 447 aaKnown RBP2.2□□□□□ -2.06
NIP100YPL174C HMG1P12683 1054 aa2.2□□□□□ -2.06
NIP100YPL174C RNR1P21524 888 aaKnown RBP2.2□□□□□ -2.06
NIP100YPL174C PHO11P35842 467 aa2.2□□□□□ -2.06
NIP100YPL174C PHO12P38693 467 aa2.2□□□□□ -2.06
NIP100YPL174C CRP1P38845 465 aaKnown RBP2.2□□□□□ -2.06
NIP100YPL174C HOS4P40480 1083 aa2.2□□□□□ -2.06
NIP100YPL174C HXT16P47185 567 aa2.2□□□□□ -2.06
NIP100YPL174C YMR210WQ03649 449 aa2.2□□□□□ -2.06
NIP100YPL174C SFL1P20134 766 aa2.19□□□□□ -2.06
NIP100YPL174C MIP6P38760 659 aaKnown RBP2.19□□□□□ -2.06
NIP100YPL174C YNL195CP40168 261 aa2.19□□□□□ -2.06
NIP100YPL174C SET2P46995 733 aaKnown RBP2.19□□□□□ -2.06
NIP100YPL174C RNH70P53331 553 aa2.19□□□□□ -2.06
NIP100YPL174C COG8Q04632 607 aa2.19□□□□□ -2.06
NIP100YPL174C VHS3Q08438 674 aa2.19□□□□□ -2.06
NIP100YPL174C SLK19Q08581 821 aaKnown RBP2.19□□□□□ -2.06
NIP100YPL174C STE12P13574 688 aa2.19□□□□□ -2.06
NIP100YPL174C NTH1P32356 751 aa2.19□□□□□ -2.06
NIP100YPL174C HIR1P32479 840 aa2.19□□□□□ -2.06
NIP100YPL174C BDH2P39713 417 aa2.19□□□□□ -2.06
NIP100YPL174C RPN13O13563 156 aa2.18□□□□□ -2.06
NIP100YPL174C ORC2P32833 620 aa2.18□□□□□ -2.06
NIP100YPL174C YKR018CP36114 725 aa2.18□□□□□ -2.06
NIP100YPL174C RIX1P38883 763 aaPredicted RBP2.18□□□□□ -2.06
NIP100YPL174C TY4A-JP47023 414 aa2.18□□□□□ -2.06
NIP100YPL174C TAH11P47112 604 aa2.18□□□□□ -2.06
NIP100YPL174C ATG4P53867 494 aa2.18□□□□□ -2.06
NIP100YPL174C SMX3P54999 86 aaPredicted RBP2.18□□□□□ -2.06
NIP100YPL174C ATG33Q06485 197 aa2.18□□□□□ -2.06
NIP100YPL174C MDM20Q12387 796 aaKnown RBP2.18□□□□□ -2.06
NIP100YPL174C ADR1P07248 1323 aa2.18□□□□□ -2.06
NIP100YPL174C MAL31P38156 614 aa2.18□□□□□ -2.06
NIP100YPL174C DUN1P39009 513 aa2.18□□□□□ -2.06
NIP100YPL174C YIL077CP40508 320 aa2.18□□□□□ -2.06
NIP100YPL174C FMP30Q02883 468 aa2.18□□□□□ -2.06
NIP100YPL174C VBA4Q04602 768 aaKnown RBP2.18□□□□□ -2.06
NIP100YPL174C YDL086WQ07505 273 aa2.18□□□□□ -2.06
NIP100YPL174C YPT53P36019 220 aa2.17□□□□□ -2.06
NIP100YPL174C YHR202WP38887 602 aa2.17□□□□□ -2.06
NIP100YPL174C MNN1P39106 762 aa2.17□□□□□ -2.06
NIP100YPL174C HRP1Q99383 534 aaKnown RBP2.17□□□□□ -2.06
NIP100YPL174C BNR1P40450 1375 aa2.17□□□□□ -2.06
NIP100YPL174C ERG6P25087 383 aaKnown RBP2.17□□□□□ -2.06
NIP100YPL174C KIN82P25341 720 aa2.17□□□□□ -2.06
NIP100YPL174C PRP19P32523 503 aaKnown RBP2.17□□□□□ -2.06
NIP100YPL174C YEL1P34225 687 aa2.17□□□□□ -2.06
NIP100YPL174C GMH1P36125 273 aa2.17□□□□□ -2.06
NIP100YPL174C APL3P38065 1025 aa2.17□□□□□ -2.06
NIP100YPL174C LYS9P38999 446 aa2.17□□□□□ -2.06
NIP100YPL174C BUD6P41697 788 aa2.17□□□□□ -2.06
NIP100YPL174C RSC8P43609 557 aaKnown RBP2.17□□□□□ -2.06
NIP100YPL174C YGR153WP48238 217 aa2.17□□□□□ -2.06
NIP100YPL174C MAL11P53048 616 aa2.17□□□□□ -2.06
NIP100YPL174C YGR151CP53287 111 aa2.17□□□□□ -2.06
NIP100YPL174C ALG12P53730 551 aa2.17□□□□□ -2.06
NIP100YPL174C YSH1Q06224 779 aaPredicted RBP2.17□□□□□ -2.06
NIP100YPL174C CHS5Q12114 671 aaKnown RBP2.17□□□□□ -2.06
NIP100YPL174C PEX1P24004 1043 aa2.16□□□□□ -2.06
NIP100YPL174C ILV6P25605 309 aaKnown RBP2.16□□□□□ -2.06
NIP100YPL174C FUB1P25659 250 aa2.16□□□□□ -2.06
NIP100YPL174C RRP14P36080 434 aaKnown RBP2.16□□□□□ -2.06
NIP100YPL174C RIM4P38741 713 aa2.16□□□□□ -2.06
NIP100YPL174C BAP3P41815 604 aa2.16□□□□□ -2.06
NIP100YPL174C NMA2P53204 395 aa2.16□□□□□ -2.06
NIP100YPL174C IMO32P53219 342 aa2.16□□□□□ -2.06
NIP100YPL174C PRP22P24384 1145 aaKnown RBP2.16□□□□□ -2.06
NIP100YPL174C HRB1P38922 454 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
NIP100YPL174C GET2P40056 285 aa2.16□□□□□ -2.06
NIP100YPL174C NOP9P47077 666 aaKnown RBP2.16□□□□□ -2.06
NIP100YPL174C MLH3Q12083 715 aa2.16□□□□□ -2.06
NIP100YPL174C YGR161W-CQ3E744 92 aa2.16□□□□□ -2.06
NIP100YPL174C HOM2P13663 365 aaKnown RBP2.15□□□□□ -2.06
NIP100YPL174C PRP28P23394 588 aa2.15□□□□□ -2.06
NIP100YPL174C BCS1P32839 456 aa2.15□□□□□ -2.06
NIP100YPL174C MNN4P36044 1178 aa2.15□□□□□ -2.06
NIP100YPL174C KSP1P38691 1029 aaKnown RBP2.15□□□□□ -2.06
NIP100YPL174C PEA2P40091 420 aa2.15□□□□□ -2.06
NIP100YPL174C YNL193WP53870 558 aa2.15□□□□□ -2.06
NIP100YPL174C YHM2Q04013 314 aa2.15□□□□□ -2.06
NIP100YPL174C GPR1Q12361 961 aa2.15□□□□□ -2.06
NIP100YPL174C NOP14Q99207 810 aaKnown RBP2.15□□□□□ -2.06
NIP100YPL174C THR1P17423 357 aaKnown RBP2.15□□□□□ -2.07
NIP100YPL174C ADY2P25613 283 aa2.15□□□□□ -2.07
NIP100YPL174C FEN2P25621 512 aaKnown RBP2.15□□□□□ -2.07
NIP100YPL174C PCL2P25693 308 aa2.15□□□□□ -2.07
NIP100YPL174C COS111P38308 924 aa2.15□□□□□ -2.07
NIP100YPL174C PCM1P38628 557 aaKnown RBP2.15□□□□□ -2.07
NIP100YPL174C MUP3P38734 546 aa2.15□□□□□ -2.07
NIP100YPL174C YEL020CP39994 560 aa2.15□□□□□ -2.07
NIP100YPL174C MET13P53128 600 aa2.15□□□□□ -2.07
NIP100YPL174C PPN1Q04119 674 aa2.15□□□□□ -2.07
NIP100YPL174C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms