RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	SNP1	Q00916	300 aa	Predicted RBP	4.78	□□□□□ -1.64
SME1	YOR159C	ARG5,6	Q01217	863 aa		4.78	□□□□□ -1.64
SME1	YOR159C	HRP1	Q99383	534 aa	Known RBP	4.78	□□□□□ -1.64
SME1	YOR159C	SIR3	P06701	978 aa		4.77	□□□□□ -1.65
SME1	YOR159C	SRD1	P09007	221 aa		4.77	□□□□□ -1.65
SME1	YOR159C	APL2	P36000	726 aa	Predicted RBP	4.77	□□□□□ -1.65
SME1	YOR159C	UBS1	P38290	277 aa		4.77	□□□□□ -1.65
SME1	YOR159C	REV7	P38927	245 aa		4.77	□□□□□ -1.65
SME1	YOR159C	YJL206C	P39529	758 aa		4.77	□□□□□ -1.65
SME1	YOR159C	RNH70	P53331	553 aa		4.77	□□□□□ -1.65
SME1	YOR159C	YKL033W-A	Q86ZR7	236 aa		4.77	□□□□□ -1.65
SME1	YOR159C	RAD18	P10862	487 aa		4.76	□□□□□ -1.65
SME1	YOR159C	HCA4	P20448	770 aa	Known RBP	4.76	□□□□□ -1.65
SME1	YOR159C	RRP14	P36080	434 aa	Known RBP	4.76	□□□□□ -1.65
SME1	YOR159C	MIP6	P38760	659 aa	Known RBP	4.76	□□□□□ -1.65
SME1	YOR159C	NDC80	P40460	691 aa		4.76	□□□□□ -1.65
SME1	YOR159C	ORC4	P54791	529 aa		4.76	□□□□□ -1.65
SME1	YOR159C	CTK1	Q03957	528 aa	Known RBP	4.76	□□□□□ -1.65
SME1	YOR159C	NTG2	Q08214	380 aa		4.76	□□□□□ -1.65
SME1	YOR159C	MLH3	Q12083	715 aa		4.76	□□□□□ -1.65
SME1	YOR159C	PYC1	P11154	1178 aa	Known RBP	4.75	□□□□□ -1.65
SME1	YOR159C	HOG1	P32485	435 aa		4.75	□□□□□ -1.65
SME1	YOR159C	EMP70	P32802	667 aa		4.75	□□□□□ -1.65
SME1	YOR159C	PHO11	P35842	467 aa		4.75	□□□□□ -1.65
SME1	YOR159C	PHO12	P38693	467 aa		4.75	□□□□□ -1.65
SME1	YOR159C	NUP60	P39705	539 aa		4.75	□□□□□ -1.65
SME1	YOR159C	GET2	P40056	285 aa		4.75	□□□□□ -1.65
SME1	YOR159C	DOT6	P40059	670 aa	Known RBP	4.75	□□□□□ -1.65
SME1	YOR159C	UBC9	P50623	157 aa	Predicted RBP	4.75	□□□□□ -1.65
SME1	YOR159C	ALG12	P53730	551 aa		4.75	□□□□□ -1.65
SME1	YOR159C	ORC1	P54784	914 aa	Predicted RBP	4.75	□□□□□ -1.65
SME1	YOR159C	LEE1	Q02799	301 aa	Known RBP	4.75	□□□□□ -1.65
SME1	YOR159C	NHX1	Q04121	633 aa		4.75	□□□□□ -1.65
SME1	YOR159C	TAF3	Q12297	353 aa		4.75	□□□□□ -1.65
SME1	YOR159C	ADY2	P25613	283 aa		4.74	□□□□□ -1.65
SME1	YOR159C	TRZ1	P36159	838 aa	Predicted RBP	4.74	□□□□□ -1.65
SME1	YOR159C	HSL7	P38274	827 aa		4.74	□□□□□ -1.65
SME1	YOR159C	YAP1802	P53309	568 aa		4.74	□□□□□ -1.65
SME1	YOR159C	ARP4	P80428	489 aa		4.74	□□□□□ -1.65
SME1	YOR159C	RPN7	Q06103	429 aa	Known RBP	4.74	□□□□□ -1.65
SME1	YOR159C	TUB1	P09733	447 aa	Known RBP	4.73	□□□□□ -1.65
SME1	YOR159C	YNL195C	P40168	261 aa		4.73	□□□□□ -1.65
SME1	YOR159C	FHN1	P53279	174 aa		4.73	□□□□□ -1.65
SME1	YOR159C	MCM21	Q06675	368 aa		4.73	□□□□□ -1.65
SME1	YOR159C	NDJ1	Q12366	352 aa		4.73	□□□□□ -1.65
SME1	YOR159C	RNR1	P21524	888 aa	Known RBP	4.72	□□□□□ -1.65
SME1	YOR159C	APT2	P36973	181 aa		4.72	□□□□□ -1.65
SME1	YOR159C	YIL166C	P40445	542 aa		4.72	□□□□□ -1.65
SME1	YOR159C	ARO10	Q06408	635 aa		4.72	□□□□□ -1.65
SME1	YOR159C	ECM3	Q99252	613 aa		4.72	□□□□□ -1.65
SME1	YOR159C	DMC1	P25453	334 aa		4.71	□□□□□ -1.66
SME1	YOR159C	SFP1	P32432	683 aa		4.71	□□□□□ -1.66
SME1	YOR159C	YEL1	P34225	687 aa		4.71	□□□□□ -1.66
SME1	YOR159C	NMD2	P38798	1089 aa	Known RBP	4.71	□□□□□ -1.66
SME1	YOR159C	IMO32	P53219	342 aa		4.71	□□□□□ -1.66
SME1	YOR159C	TFB2	Q02939	513 aa		4.71	□□□□□ -1.66
SME1	YOR159C	HMO1	Q03973	246 aa	Known RBP	4.71	□□□□□ -1.66
SME1	YOR159C	USV1	Q12132	391 aa		4.71	□□□□□ -1.66
SME1	YOR159C	RKR1	Q04781	1562 aa		4.7	□□□□□ -1.66
SME1	YOR159C	THR1	P17423	357 aa	Known RBP	4.7	□□□□□ -1.66
SME1	YOR159C	MDM10	P18409	493 aa		4.7	□□□□□ -1.66
SME1	YOR159C	AIM14	P53109	570 aa		4.7	□□□□□ -1.66
SME1	YOR159C	PCL10	P53124	433 aa		4.7	□□□□□ -1.66
SME1	YOR159C	COX18	P53239	316 aa		4.7	□□□□□ -1.66
SME1	YOR159C	COG8	Q04632	607 aa		4.7	□□□□□ -1.66
SME1	YOR159C	SFL1	P20134	766 aa		4.69	□□□□□ -1.66
SME1	YOR159C	PCL2	P25693	308 aa		4.69	□□□□□ -1.66
SME1	YOR159C	YKR018C	P36114	725 aa		4.69	□□□□□ -1.66
SME1	YOR159C	SET3	P36124	751 aa		4.69	□□□□□ -1.66
SME1	YOR159C	GLG1	P36143	616 aa		4.69	□□□□□ -1.66
SME1	YOR159C	MNN1	P39106	762 aa		4.69	□□□□□ -1.66
SME1	YOR159C	BDH2	P39713	417 aa		4.69	□□□□□ -1.66
SME1	YOR159C	ARG2	P40360	574 aa		4.69	□□□□□ -1.66
SME1	YOR159C	NOP9	P47077	666 aa	Known RBP	4.69	□□□□□ -1.66
SME1	YOR159C	CTR1	P49573	406 aa		4.69	□□□□□ -1.66
SME1	YOR159C	ZRT2	Q12436	422 aa		4.69	□□□□□ -1.66
SME1	YOR159C	NOP14	Q99207	810 aa	Known RBP	4.69	□□□□□ -1.66
SME1	YOR159C	HMG1	P12683	1054 aa		4.68	□□□□□ -1.66
SME1	YOR159C	SPO11	P23179	398 aa		4.68	□□□□□ -1.66
SME1	YOR159C	CRP1	P38845	465 aa	Known RBP	4.68	□□□□□ -1.66
SME1	YOR159C	GID8	P40208	455 aa		4.68	□□□□□ -1.66
SME1	YOR159C	BRE5	P53741	515 aa	Known RBP	4.68	□□□□□ -1.66
SME1	YOR159C	ATG4	P53867	494 aa		4.68	□□□□□ -1.66
SME1	YOR159C	YNL193W	P53870	558 aa		4.68	□□□□□ -1.66
SME1	YOR159C	UTP14	Q04500	899 aa	Known RBP	4.68	□□□□□ -1.66
SME1	YOR159C	ATG33	Q06485	197 aa		4.68	□□□□□ -1.66
SME1	YOR159C	GIN4	Q12263	1142 aa		4.68	□□□□□ -1.66
SME1	YOR159C	MNN4	P36044	1178 aa		4.67	□□□□□ -1.66
SME1	YOR159C	REC102	Q02721	264 aa		4.67	□□□□□ -1.66
SME1	YOR159C	NTE1	Q04958	1679 aa		4.67	□□□□□ -1.66
SME1	YOR159C	PCM1	P38628	557 aa	Known RBP	4.66	□□□□□ -1.66
SME1	YOR159C	YEL020C	P39994	560 aa		4.66	□□□□□ -1.66
SME1	YOR159C	SDA1	P53313	767 aa	Known RBP	4.66	□□□□□ -1.66
SME1	YOR159C	APM1	Q00776	475 aa	Predicted RBP	4.66	□□□□□ -1.66
SME1	YOR159C	THI7	Q05998	598 aa		4.66	□□□□□ -1.66
SME1	YOR159C	RPL8A	P17076	256 aa	Known RBP	4.65	□□□□□ -1.67
SME1	YOR159C	PEX1	P24004	1043 aa		4.65	□□□□□ -1.67
SME1	YOR159C	BCS1	P32839	456 aa		4.65	□□□□□ -1.67
SME1	YOR159C	MET13	P53128	600 aa		4.65	□□□□□ -1.67
SME1	YOR159C	THI22	Q06490	572 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms