RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W POP4P38336 279 aa6.2□□□□□ -1.42
VPS5YOR069W YGR273CP53329 174 aa6.2□□□□□ -1.42
VPS5YOR069W RAT1Q02792 1006 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W YDR476CQ03362 224 aa6.2□□□□□ -1.42
VPS5YOR069W MSH6Q03834 1242 aa6.2□□□□□ -1.42
VPS5YOR069W YLR053CQ12026 108 aa6.2□□□□□ -1.42
VPS5YOR069W RRD2Q12461 358 aa6.2□□□□□ -1.42
VPS5YOR069W MEF1P25039 761 aa6.2□□□□□ -1.42
VPS5YOR069W RRT12P25381 491 aa6.2□□□□□ -1.42
VPS5YOR069W MCM5P29496 775 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W RRN6P32786 894 aa6.2□□□□□ -1.42
VPS5YOR069W NUP82P40368 713 aa6.2□□□□□ -1.42
VPS5YOR069W PRK1P40494 810 aa6.2□□□□□ -1.42
VPS5YOR069W SYG1P40528 902 aa6.2□□□□□ -1.42
VPS5YOR069W IRR1P40541 1150 aa6.2□□□□□ -1.42
VPS5YOR069W IRC4Q03036 179 aa6.2□□□□□ -1.42
VPS5YOR069W BUL2Q03758 920 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W ATG16Q03818 150 aa6.2□□□□□ -1.42
VPS5YOR069W SPO71Q03868 1245 aa6.2□□□□□ -1.42
VPS5YOR069W PLP1Q04004 230 aa6.2□□□□□ -1.42
VPS5YOR069W BCP1Q06338 283 aa6.2□□□□□ -1.42
VPS5YOR069W RLP24Q07915 199 aaKnown RBP6.2□□□□□ -1.42
VPS5YOR069W DIA2Q08496 732 aaPredicted RBP6.2□□□□□ -1.42
VPS5YOR069W CNA1P23287 553 aa6.19□□□□□ -1.42
VPS5YOR069W MGT1P26188 188 aa6.19□□□□□ -1.42
VPS5YOR069W SEC21P32074 935 aaKnown RBP6.19□□□□□ -1.42
VPS5YOR069W CUE2P36075 443 aaKnown RBP6.19□□□□□ -1.42
VPS5YOR069W SPC42P36094 363 aa6.19□□□□□ -1.42
VPS5YOR069W TSC10P38342 320 aa6.19□□□□□ -1.42
VPS5YOR069W DIA4P38705 446 aaPredicted RBP6.19□□□□□ -1.42
VPS5YOR069W BRL1P38770 471 aa6.19□□□□□ -1.42
VPS5YOR069W GAA1P39012 614 aa6.19□□□□□ -1.42
VPS5YOR069W MAM33P40513 266 aa6.19□□□□□ -1.42
VPS5YOR069W YFH7P43591 353 aa6.19□□□□□ -1.42
VPS5YOR069W ROG3P43602 733 aa6.19□□□□□ -1.42
VPS5YOR069W RFX1P48743 811 aa6.19□□□□□ -1.42
VPS5YOR069W FOL1P53848 824 aa6.19□□□□□ -1.42
VPS5YOR069W PGA2P53903 129 aa6.19□□□□□ -1.42
VPS5YOR069W SEN54Q02825 467 aaPredicted RBP6.19□□□□□ -1.42
VPS5YOR069W MGR3Q04472 501 aa6.19□□□□□ -1.42
VPS5YOR069W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
VPS5YOR069W YPR202WQ08993 238 aa6.19□□□□□ -1.42
VPS5YOR069W MYO1P08964 1928 aa6.19□□□□□ -1.42
VPS5YOR069W ATR1P13090 542 aa6.18□□□□□ -1.42
VPS5YOR069W DBP5P20449 482 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W LCB1P25045 558 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W SNT1P25357 1226 aa6.18□□□□□ -1.42
VPS5YOR069W KAR4P25583 335 aa6.18□□□□□ -1.42
VPS5YOR069W ICL1P28240 557 aaPredicted RBP6.18□□□□□ -1.42
VPS5YOR069W PEX2P32800 271 aa6.18□□□□□ -1.42
VPS5YOR069W RAD54P32863 898 aa6.18□□□□□ -1.42
VPS5YOR069W BCK2P33306 851 aa6.18□□□□□ -1.42
VPS5YOR069W UTP11P34247 250 aaPredicted RBP6.18□□□□□ -1.42
VPS5YOR069W TGL4P36165 910 aa6.18□□□□□ -1.42
VPS5YOR069W PCF11P39081 626 aaPredicted RBP6.18□□□□□ -1.42
VPS5YOR069W FIG4P42837 879 aa6.18□□□□□ -1.42
VPS5YOR069W STB2P46679 850 aa6.18□□□□□ -1.42
VPS5YOR069W YGR054WP53235 642 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W RPT4P53549 437 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W RPN8Q08723 338 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W YPL277CQ08989 487 aa6.18□□□□□ -1.42
VPS5YOR069W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
VPS5YOR069W ENT1Q12518 454 aa6.18□□□□□ -1.42
VPS5YOR069W SSC1P0CS90 654 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W PET122P10355 254 aa6.18□□□□□ -1.42
VPS5YOR069W STE6P12866 1290 aa6.18□□□□□ -1.42
VPS5YOR069W PDC5P16467 563 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W RAD14P28519 371 aa6.18□□□□□ -1.42
VPS5YOR069W SMF2P38778 549 aa6.18□□□□□ -1.42
VPS5YOR069W PEX18P38855 283 aa6.18□□□□□ -1.42
VPS5YOR069W STL1P39932 569 aa6.18□□□□□ -1.42
VPS5YOR069W RSM26P47141 266 aa6.18□□□□□ -1.42
VPS5YOR069W IMD4P50094 524 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W PAN2P53010 1115 aaPredicted RBP6.18□□□□□ -1.42
VPS5YOR069W KTR5P53966 522 aaPredicted RBP6.18□□□□□ -1.42
VPS5YOR069W ADE12P80210 433 aaKnown RBP6.18□□□□□ -1.42
VPS5YOR069W ULP1Q02724 621 aa6.18□□□□□ -1.42
VPS5YOR069W TY1B-AO13527 1196 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W ILV1P00927 576 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W CDC33P07260 213 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W RGR1P19263 1082 aa6.17□□□□□ -1.42
VPS5YOR069W BUD23P25627 275 aaPredicted RBP6.17□□□□□ -1.42
VPS5YOR069W CSE1P33307 960 aa6.17□□□□□ -1.42
VPS5YOR069W YEL1P34225 687 aa6.17□□□□□ -1.42
VPS5YOR069W PDX3P38075 228 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W DUG2P38149 878 aa6.17□□□□□ -1.42
VPS5YOR069W NPT1P39683 429 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W FRT2P39734 528 aa6.17□□□□□ -1.42
VPS5YOR069W UBP9P39967 754 aa6.17□□□□□ -1.42
VPS5YOR069W ASG1P40467 964 aa6.17□□□□□ -1.42
VPS5YOR069W LAM5P43560 674 aa6.17□□□□□ -1.42
VPS5YOR069W YGL108CP53139 140 aa6.17□□□□□ -1.42
VPS5YOR069W YGR111WP53265 400 aa6.17□□□□□ -1.42
VPS5YOR069W CIK1Q01649 594 aa6.17□□□□□ -1.42
VPS5YOR069W CWC15Q03772 175 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W NOP12Q08208 459 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W SNX3Q08826 162 aaKnown RBP6.17□□□□□ -1.42
VPS5YOR069W GPR1Q12361 961 aa6.17□□□□□ -1.42
VPS5YOR069W TUB1P09733 447 aaKnown RBP6.16□□□□□ -1.42
VPS5YOR069W SNF3P10870 884 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms