RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	ELO3	P40319	345 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	HOS4	P40480	1083 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	NIT2	P47016	307 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	COX18	P53239	316 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	GPD1	Q00055	391 aa	Known RBP	4.18	□□□□□ -1.74
SRP1	YNL189W	KIN4	Q01919	800 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	RCR2	Q03446	210 aa	Known RBP	4.18	□□□□□ -1.74
SRP1	YNL189W	GAD1	Q04792	585 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	VPS36	Q06696	566 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	ECM3	Q99252	613 aa		4.18	□□□□□ -1.74
SRP1	YNL189W	ATP12	P22135	325 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	PLC1	P32383	869 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	DUG1	P43616	481 aa	Known RBP	4.17	□□□□□ -1.74
SRP1	YNL189W	NOP15	P53927	220 aa	Predicted RBP	4.17	□□□□□ -1.74
SRP1	YNL189W	HMO1	Q03973	246 aa	Known RBP	4.17	□□□□□ -1.74
SRP1	YNL189W	DLT1	Q04216	342 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	MCM21	Q06675	368 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	TRE2	Q08693	809 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	CAF20	P12962	161 aa	Known RBP	4.17	□□□□□ -1.74
SRP1	YNL189W	MRC1	P25588	1096 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	YCR015C	P25616	317 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	YKR075C	P36155	307 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	ECM1	P39715	212 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	SUN4	P53616	420 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	AIM39	Q08223	395 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	IRC13	Q08630	104 aa		4.17	□□□□□ -1.74
SRP1	YNL189W	TRZ1	P36159	838 aa	Predicted RBP	4.16	□□□□□ -1.74
SRP1	YNL189W	SUL1	P38359	859 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	YIR042C	P40586	236 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	NOP9	P47077	666 aa	Known RBP	4.16	□□□□□ -1.74
SRP1	YNL189W	BFA1	P47113	574 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	REC102	Q02721	264 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	YMR210W	Q03649	449 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	STP4	Q07351	490 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	VHS3	Q08438	674 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	FRE5	Q08908	694 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	RMP1	Q12530	201 aa		4.16	□□□□□ -1.74
SRP1	YNL189W	RPS17A	P02407	136 aa	Known RBP	4.15	□□□□□ -1.74
SRP1	YNL189W	MET3	P08536	511 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	LAT1	P12695	482 aa	Known RBP	4.15	□□□□□ -1.74
SRP1	YNL189W	RPS17B	P14127	136 aa	Known RBP	4.15	□□□□□ -1.74
SRP1	YNL189W	CDC26	P14724	124 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	IME1	P21190	360 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	AEP2	P22136	580 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	FMO1	P38866	432 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	VID28	P40547	921 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	BAP3	P41815	604 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	PEX14	P53112	341 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	PEX8	P53248	589 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	TGL2	P54857	326 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	PTA1	Q01329	785 aa	Predicted RBP	4.15	□□□□□ -1.74
SRP1	YNL189W	SGO1	Q08490	590 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	APM4	Q99186	491 aa		4.15	□□□□□ -1.74
SRP1	YNL189W	ALG7	P07286	448 aa		4.14	□□□□□ -1.75
SRP1	YNL189W	FRS1	P15624	595 aa	Known RBP	4.14	□□□□□ -1.75
SRP1	YNL189W	YPT7	P32939	208 aa		4.14	□□□□□ -1.75
SRP1	YNL189W	BIT2	P38346	545 aa		4.14	□□□□□ -1.75
SRP1	YNL189W	BCD1	P38772	366 aa		4.14	□□□□□ -1.75
SRP1	YNL189W	RSC8	P43609	557 aa	Known RBP	4.14	□□□□□ -1.75
SRP1	YNL189W	SKY1	Q03656	742 aa		4.14	□□□□□ -1.75
SRP1	YNL189W	ECM38	Q05902	660 aa	Predicted RBP	4.14	□□□□□ -1.75
SRP1	YNL189W	YPR027C	Q12079	277 aa		4.14	□□□□□ -1.75
SRP1	YNL189W	HEM12	P32347	362 aa	Predicted RBP	4.13	□□□□□ -1.75
SRP1	YNL189W	HIS7	P33734	552 aa	Known RBP	4.13	□□□□□ -1.75
SRP1	YNL189W	TRM2	P33753	639 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	YKL222C	P35995	705 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	APT2	P36973	181 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	KTR4	P38131	464 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	PPS1	P38148	807 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SRP1	YNL189W	BUD8	P41698	603 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	YJL163C	P46996	555 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	AMA1	P50082	593 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	YNL034W	P53963	612 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	YNL018C	P53976	612 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	CTK1	Q03957	528 aa	Known RBP	4.13	□□□□□ -1.75
SRP1	YNL189W	SND1	Q04007	877 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	ADY4	Q05955	493 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	YOL073C	Q08232	322 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	PMI40	P29952	429 aa	Known RBP	4.13	□□□□□ -1.75
SRP1	YNL189W	PET127	P32606	800 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	IES1	P43579	692 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	UBC11	P52492	156 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	YMR206W	Q03695	313 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SRP1	YNL189W	MPD2	Q99316	277 aa		4.13	□□□□□ -1.75
SRP1	YNL189W	COX11	P19516	300 aa	Known RBP	4.12	□□□□□ -1.75
SRP1	YNL189W	MVD1	P32377	396 aa	Known RBP	4.12	□□□□□ -1.75
SRP1	YNL189W	HXT4	P32467	576 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	HIR1	P32479	840 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	DUN1	P39009	513 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	NUP60	P39705	539 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	YJR008W	P47085	338 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	RNT1	Q02555	471 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	ATG11	Q12527	1178 aa		4.12	□□□□□ -1.75
SRP1	YNL189W	PPR1	P07272	904 aa	Predicted RBP	4.11	□□□□□ -1.75
SRP1	YNL189W	HCA4	P20448	770 aa	Known RBP	4.11	□□□□□ -1.75
SRP1	YNL189W	PEX1	P24004	1043 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	GRX7	P38068	203 aa		4.11	□□□□□ -1.75
SRP1	YNL189W	SFB3	P38810	929 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms