RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	PUS2	P53167	370 aa		12.52	□□□□□ -0.41
CUE1	YMR264W	NOG2	P53742	486 aa	Known RBP	12.52	□□□□□ -0.41
CUE1	YMR264W	MSC2	Q03455	724 aa		12.52	□□□□□ -0.41
CUE1	YMR264W	YLR225C	Q05948	407 aa	Known RBP	12.52	□□□□□ -0.41
CUE1	YMR264W	YLR455W	Q06188	304 aa		12.52	□□□□□ -0.41
CUE1	YMR264W	YOR059C	Q08448	450 aa	Known RBP	12.52	□□□□□ -0.41
CUE1	YMR264W	ATG11	Q12527	1178 aa		12.52	□□□□□ -0.41
CUE1	YMR264W	SFL1	P20134	766 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	CLB1	P24868	471 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	SPT5	P27692	1063 aa	Known RBP	12.51	□□□□□ -0.41
CUE1	YMR264W	PRR1	P28708	518 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	RPC37	P36121	282 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	APM2	P38700	605 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	TMN3	P40071	706 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	YMR134W	P40207	237 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	ZAP1	P47043	880 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	HOP2	P53187	214 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	CPR6	P53691	371 aa	Known RBP	12.51	□□□□□ -0.41
CUE1	YMR264W	GPD1	Q00055	391 aa	Known RBP	12.51	□□□□□ -0.41
CUE1	YMR264W	ACM1	Q08981	209 aa		12.51	□□□□□ -0.41
CUE1	YMR264W	COX4	P04037	155 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	SNA3	P14359	133 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	EST1	P17214	699 aa	Predicted RBP	12.5	□□□□□ -0.41
CUE1	YMR264W	AFT1	P22149	690 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	GPI10	P30777	616 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	EFB1	P32471	206 aa	Known RBP	12.5	□□□□□ -0.41
CUE1	YMR264W	YME1	P32795	747 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	ULI1	P43604	169 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	YML6	P51998	286 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	CWC21	Q03375	135 aa	Known RBP	12.5	□□□□□ -0.41
CUE1	YMR264W	FRA1	Q07825	749 aa		12.5	□□□□□ -0.41
CUE1	YMR264W	PEP5	P12868	1029 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	MSS51	P32335	436 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	OAF3	P36023	863 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	CCL1	P37366	393 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	SMX2	P40204	77 aa	Known RBP	12.49	□□□□□ -0.41
CUE1	YMR264W	URB2	P47108	1174 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	ALT1	P52893	592 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	YGL036W	P53185	909 aa	Predicted RBP	12.49	□□□□□ -0.41
CUE1	YMR264W	USA1	Q03714	838 aa		12.49	□□□□□ -0.41
CUE1	YMR264W	TUB3	P09734	445 aa	Known RBP	12.48	□□□□□ -0.41
CUE1	YMR264W	PDR1	P12383	1068 aa		12.48	□□□□□ -0.41
CUE1	YMR264W	POL3	P15436	1097 aa		12.48	□□□□□ -0.41
CUE1	YMR264W	ILV6	P25605	309 aa	Known RBP	12.48	□□□□□ -0.41
CUE1	YMR264W	PCA1	P38360	1216 aa		12.48	□□□□□ -0.41
CUE1	YMR264W	YHR054C	P38780	354 aa		12.48	□□□□□ -0.41
CUE1	YMR264W	QNS1	P38795	714 aa	Known RBP	12.48	□□□□□ -0.41
CUE1	YMR264W	SSP1	P38871	571 aa		12.48	□□□□□ -0.41
CUE1	YMR264W	TRS85	P46944	698 aa		12.48	□□□□□ -0.41
CUE1	YMR264W	CUS1	Q02554	436 aa	Predicted RBP	12.48	□□□□□ -0.41
CUE1	YMR264W	YML002W	P0CF17	737 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	GLN3	P18494	730 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	DBP1	P24784	617 aa	Known RBP	12.47	□□□□□ -0.41
CUE1	YMR264W	POP4	P38336	279 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	PCM1	P38628	557 aa	Known RBP	12.47	□□□□□ -0.41
CUE1	YMR264W	SKP2	P42843	763 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	SNZ3	P43545	298 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	SNZ2	P53824	298 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	DAK1	P54838	584 aa	Known RBP	12.47	□□□□□ -0.41
CUE1	YMR264W	SXM1	Q04175	944 aa	Known RBP	12.47	□□□□□ -0.41
CUE1	YMR264W	ICL2	Q12031	575 aa		12.47	□□□□□ -0.41
CUE1	YMR264W	RAD10	P06838	210 aa		12.46	□□□□□ -0.41
CUE1	YMR264W	GCR1	P07261	785 aa		12.46	□□□□□ -0.41
CUE1	YMR264W	AEP2	P22136	580 aa		12.46	□□□□□ -0.41
CUE1	YMR264W	NOP4	P37838	685 aa	Known RBP	12.46	□□□□□ -0.41
CUE1	YMR264W	KHA1	P40309	873 aa		12.46	□□□□□ -0.41
CUE1	YMR264W	MND1	P53102	219 aa		12.46	□□□□□ -0.41
CUE1	YMR264W	ALG11	P53954	548 aa	Known RBP	12.46	□□□□□ -0.41
CUE1	YMR264W	DOT1	Q04089	582 aa	Known RBP	12.46	□□□□□ -0.41
CUE1	YMR264W	PIG1	Q06216	648 aa		12.46	□□□□□ -0.41
CUE1	YMR264W	JIP3	O13555	125 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	ADE4	P04046	510 aa	Known RBP	12.45	□□□□□ -0.42
CUE1	YMR264W	ADE2	P21264	571 aa	Known RBP	12.45	□□□□□ -0.42
CUE1	YMR264W	TRX1	P22217	103 aa	Known RBP	12.45	□□□□□ -0.42
CUE1	YMR264W	BCS1	P32839	456 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	MRP4	P32902	394 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	YMC2	P38087	329 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	LAM5	P43560	674 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	SHR3	Q02774	210 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	YMR102C	Q03177	834 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	YPR027C	Q12079	277 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	YDR018C	Q12185	396 aa		12.45	□□□□□ -0.42
CUE1	YMR264W	RPB2	P08518	1224 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	CBF1	P17106	351 aa		12.44	□□□□□ -0.42
CUE1	YMR264W	SEC1	P30619	724 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	RPT1	P33299	467 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	ARG2	P40360	574 aa		12.44	□□□□□ -0.42
CUE1	YMR264W	RGD2	P43556	714 aa		12.44	□□□□□ -0.42
CUE1	YMR264W	YJR054W	P47114	497 aa		12.44	□□□□□ -0.42
CUE1	YMR264W	BRE5	P53741	515 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	SNU56	Q03782	492 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	PUS1	Q12211	544 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	TIF6	Q12522	245 aa	Known RBP	12.44	□□□□□ -0.42
CUE1	YMR264W	RTP1	Q12751	981 aa		12.44	□□□□□ -0.42
CUE1	YMR264W	VBA3	P25594	458 aa		12.43	□□□□□ -0.42
CUE1	YMR264W	YCR051W	P25631	222 aa		12.43	□□□□□ -0.42
CUE1	YMR264W	VBA5	P36172	582 aa		12.43	□□□□□ -0.42
CUE1	YMR264W	ETP1	P38748	585 aa	Known RBP	12.43	□□□□□ -0.42
CUE1	YMR264W	GEM1	P39722	662 aa		12.43	□□□□□ -0.42
CUE1	YMR264W	YER186C	P40101	306 aa		12.43	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms