RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C ALO1P54783 526 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C SKY1Q03656 742 aa1.03□□□□□ -2.24
RKR1YMR247C MET7Q08645 548 aa1.03□□□□□ -2.24
RKR1YMR247C PSF3Q12146 194 aa1.03□□□□□ -2.24
RKR1YMR247C YBR182C-AQ8TGU6 64 aa1.03□□□□□ -2.24
RKR1YMR247C PRC1P00729 532 aa1.03□□□□□ -2.24
RKR1YMR247C CAN1P04817 590 aa1.03□□□□□ -2.24
RKR1YMR247C EMC1P25574 760 aa1.03□□□□□ -2.24
RKR1YMR247C KAR4P25583 335 aa1.03□□□□□ -2.24
RKR1YMR247C HRR25P29295 494 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C YKL091CP33324 310 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C LST4P34239 828 aa1.03□□□□□ -2.24
RKR1YMR247C LRG1P35688 1017 aa1.03□□□□□ -2.24
RKR1YMR247C SHM2P37291 469 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C AIM3P38266 947 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C BIT2P38346 545 aa1.03□□□□□ -2.24
RKR1YMR247C MUP3P38734 546 aa1.03□□□□□ -2.24
RKR1YMR247C NUP60P39705 539 aa1.03□□□□□ -2.24
RKR1YMR247C YEL025CP39991 1188 aa1.03□□□□□ -2.24
RKR1YMR247C MXR1P40029 184 aa1.03□□□□□ -2.24
RKR1YMR247C ALY2P47029 1046 aa1.03□□□□□ -2.24
RKR1YMR247C FAA4P47912 694 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C NMA2P53204 395 aa1.03□□□□□ -2.24
RKR1YMR247C SEC5P89102 971 aa1.03□□□□□ -2.24
RKR1YMR247C HRQ1Q05549 1077 aa1.03□□□□□ -2.24
RKR1YMR247C ECI1Q05871 280 aa1.03□□□□□ -2.24
RKR1YMR247C XYL2Q07993 356 aa1.03□□□□□ -2.24
RKR1YMR247C HFI1Q12060 488 aa1.03□□□□□ -2.24
RKR1YMR247C RRP6Q12149 733 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C GIN4Q12263 1142 aa1.03□□□□□ -2.24
RKR1YMR247C RIB2Q12362 591 aaKnown RBP1.03□□□□□ -2.24
RKR1YMR247C SPO11P23179 398 aa1.03□□□□□ -2.25
RKR1YMR247C SEC6P32844 805 aa1.03□□□□□ -2.25
RKR1YMR247C MCD4P36051 919 aa1.03□□□□□ -2.25
RKR1YMR247C GMH1P36125 273 aa1.03□□□□□ -2.25
RKR1YMR247C CTP1P38152 299 aa1.03□□□□□ -2.25
RKR1YMR247C BEM4P39011 633 aa1.03□□□□□ -2.25
RKR1YMR247C MAM1P40065 302 aa1.03□□□□□ -2.25
RKR1YMR247C PXA1P41909 870 aa1.03□□□□□ -2.25
RKR1YMR247C EAR1Q03212 550 aa1.03□□□□□ -2.25
RKR1YMR247C MRPL1Q04599 285 aa1.03□□□□□ -2.25
RKR1YMR247C OPY2Q06810 360 aa1.03□□□□□ -2.25
RKR1YMR247C YDL177CQ12257 170 aa1.03□□□□□ -2.25
RKR1YMR247C RPA190P10964 1664 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C SRD1P09007 221 aa1.02□□□□□ -2.25
RKR1YMR247C SRP101P32916 621 aa1.02□□□□□ -2.25
RKR1YMR247C SEG2P34250 1132 aa1.02□□□□□ -2.25
RKR1YMR247C YPT53P36019 220 aa1.02□□□□□ -2.25
RKR1YMR247C YHR020WP38708 688 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C RPP1P38786 293 aa1.02□□□□□ -2.25
RKR1YMR247C NAB3P38996 802 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
RKR1YMR247C YEL020CP39994 560 aa1.02□□□□□ -2.25
RKR1YMR247C YIL108WP40483 696 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C CPR8P53728 308 aa1.02□□□□□ -2.25
RKR1YMR247C CNM67P53865 581 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C GTB1Q04924 702 aa1.02□□□□□ -2.25
RKR1YMR247C RPN7Q06103 429 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C GUD1Q07729 489 aa1.02□□□□□ -2.25
RKR1YMR247C GAS5Q08193 484 aa1.02□□□□□ -2.25
RKR1YMR247C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
RKR1YMR247C ALG7P07286 448 aa1.02□□□□□ -2.25
RKR1YMR247C VBA3P25594 458 aa1.02□□□□□ -2.25
RKR1YMR247C YPT7P32939 208 aa1.02□□□□□ -2.25
RKR1YMR247C YKL151CP36059 337 aa1.02□□□□□ -2.25
RKR1YMR247C CCL1P37366 393 aa1.02□□□□□ -2.25
RKR1YMR247C NOP4P37838 685 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C SEA4P38164 1038 aa1.02□□□□□ -2.25
RKR1YMR247C MOH1P38191 138 aa1.02□□□□□ -2.25
RKR1YMR247C DJP1P40564 432 aa1.02□□□□□ -2.25
RKR1YMR247C YFR016CP43597 1233 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C PRP31P49704 494 aaPredicted RBP1.02□□□□□ -2.25
RKR1YMR247C SSK2P53599 1579 aa1.02□□□□□ -2.25
RKR1YMR247C YNR063WP53749 607 aa1.02□□□□□ -2.25
RKR1YMR247C YNL193WP53870 558 aa1.02□□□□□ -2.25
RKR1YMR247C HDA1P53973 706 aa1.02□□□□□ -2.25
RKR1YMR247C ARP4P80428 489 aa1.02□□□□□ -2.25
RKR1YMR247C SEG1Q04279 960 aa1.02□□□□□ -2.25
RKR1YMR247C UFO1Q04511 668 aa1.02□□□□□ -2.25
RKR1YMR247C RCL1Q08096 367 aaPredicted RBP1.02□□□□□ -2.25
RKR1YMR247C YPL066WQ12194 479 aa1.02□□□□□ -2.25
RKR1YMR247C HIF1Q12373 385 aa1.02□□□□□ -2.25
RKR1YMR247C RMP1Q12530 201 aa1.02□□□□□ -2.25
RKR1YMR247C YKL033W-AQ86ZR7 236 aa1.02□□□□□ -2.25
RKR1YMR247C AAC1P04710 309 aa1.02□□□□□ -2.25
RKR1YMR247C TOP3P13099 656 aa1.02□□□□□ -2.25
RKR1YMR247C CLC1P17891 233 aa1.02□□□□□ -2.25
RKR1YMR247C NPP1P25353 742 aa1.02□□□□□ -2.25
RKR1YMR247C MCM2P29469 868 aa1.02□□□□□ -2.25
RKR1YMR247C THI4P32318 326 aa1.02□□□□□ -2.25
RKR1YMR247C GYP6P32806 458 aa1.02□□□□□ -2.25
RKR1YMR247C UGP1P32861 499 aaKnown RBP1.02□□□□□ -2.25
RKR1YMR247C RPC34P32910 317 aa1.02□□□□□ -2.25
RKR1YMR247C NUP120P35729 1037 aa1.02□□□□□ -2.25
RKR1YMR247C SNO3P43544 222 aa1.02□□□□□ -2.25
RKR1YMR247C IMA1P53051 589 aa1.02□□□□□ -2.25
RKR1YMR247C CUL3P53202 744 aa1.02□□□□□ -2.25
RKR1YMR247C ALG12P53730 551 aa1.02□□□□□ -2.25
RKR1YMR247C YAP6Q03935 383 aa1.02□□□□□ -2.25
RKR1YMR247C SPN1Q06505 410 aaPredicted RBP1.02□□□□□ -2.25
RKR1YMR247C MCA1Q08601 432 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms