RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	RRF1	P38771	230 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	ALD5	P40047	520 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	YJL070C	P40361	888 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	RPL17B	P46990	184 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	ATP22	P50273	684 aa	Predicted RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	PSP1	P50896	841 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	CPR6	P53691	371 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	YNL108C	P53929	270 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	PUS7	Q08647	676 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	TRM8	Q12009	286 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	SNF2	P22082	1703 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	PMS1	P14242	873 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	MER1	P16523	270 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	SPO12	P17123	173 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	DBP3	P20447	523 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	HXT1	P32465	570 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	PTR2	P32901	601 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	UGA2	P38067	497 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	RFC3	P38629	340 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	STM1	P39015	273 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	AVT6	P40074	448 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	RPC17	P47076	161 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	ARC35	P53731	342 aa	Known RBP	4.37	□□□□□ -1.71
SEN1	YLR430W	ZRT2	Q12436	422 aa		4.37	□□□□□ -1.71
SEN1	YLR430W	POL3	P15436	1097 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	LCB1	P25045	558 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	CRM1	P30822	1084 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	NTR2	P36118	322 aa	Predicted RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	AST2	P39945	430 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	RPN8	Q08723	338 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	KIN2	P13186	1147 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
SEN1	YLR430W	DIT2	P21595	489 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	YTA12	P40341	825 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	GLG2	P47011	380 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	STB4	P50104	949 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	RMR1	P53060	241 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	YMR018W	Q04364	514 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	EMI2	Q04409	500 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	ECI1	Q05871	280 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	FBP26	P32604	452 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	UBP11	P36026	717 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	CCL1	P37366	393 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	TRM5	P38793	499 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	GEM1	P39722	662 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	SNZ3	P43545	298 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	CUE3	P53137	624 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	MRPL50	P53724	139 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	SNZ2	P53824	298 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	RRP17	Q04031	235 aa	Predicted RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	YLR407W	Q06070	228 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	SNU23	Q12368	194 aa	Predicted RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	OPI1	P21957	404 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	RPA135	P22138	1203 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	SHM1	P37292	490 aa	Predicted RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	ETR1	P38071	380 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	MLC1	P53141	149 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	AAD16	Q02895	342 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	PAT1	P25644	796 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	KEL1	P38853	1164 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	TIF11	P38912	153 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	MSS4	P38994	779 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	MNN11	P46985	422 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	YGR111W	P53265	400 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	YNL058C	P53947	316 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	EGD1	Q02642	157 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	BUD22	Q04347	519 aa	Known RBP	4.36	□□□□□ -1.71
SEN1	YLR430W	YPT6	Q99260	215 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	ATR1	P13090	542 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	MRPL17	P36528	281 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
SEN1	YLR430W	FMP32	P43557	207 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	IRC5	P43610	853 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	YJL049W	P47048	450 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	YGR016W	P53209	190 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	ORC4	P54791	529 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	UBP2	Q01476	1272 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	GLO2	Q05584	274 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	DXO1	Q06349	442 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	HIM1	Q06674	414 aa		4.36	□□□□□ -1.71
SEN1	YLR430W	CHO2	P05374	869 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	EUG1	P32474	517 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	TFC4	P33339	1025 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	NAT2	P37293	288 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	GIP1	P38229	639 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	SSP120	P39931	234 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	VFA1	P40080	203 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	SMX2	P40204	77 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	LYS14	P40971	790 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	SMD2	Q06217	110 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	SWI4	P25302	1093 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	DDI1	P40087	428 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	BNA3	P47039	444 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	NSE5	Q03718	556 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	TAF12	Q03761	539 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	COX20	Q04935	205 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	FUS1	P11710	512 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	MRP13	P12686	339 aa		4.35	□□□□□ -1.71
SEN1	YLR430W	DBP5	P20449	482 aa	Known RBP	4.35	□□□□□ -1.71
SEN1	YLR430W	ICL1	P28240	557 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms