RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C PEX14P53112 341 aa2.66□□□□□ -1.98
SGD1YLR336C MTL1P53214 551 aa2.66□□□□□ -1.98
SGD1YLR336C NOP15P53927 220 aaPredicted RBP2.66□□□□□ -1.98
SGD1YLR336C NTO1Q12311 748 aa2.66□□□□□ -1.98
SGD1YLR336C RMP1Q12530 201 aa2.66□□□□□ -1.98
SGD1YLR336C PYC1P11154 1178 aaKnown RBP2.66□□□□□ -1.98
SGD1YLR336C CDC26P14724 124 aa2.66□□□□□ -1.98
SGD1YLR336C RNR1P21524 888 aaKnown RBP2.66□□□□□ -1.98
SGD1YLR336C HCM1P25364 564 aa2.66□□□□□ -1.98
SGD1YLR336C ECM1P39715 212 aa2.66□□□□□ -1.98
SGD1YLR336C GET2P40056 285 aa2.66□□□□□ -1.98
SGD1YLR336C HOS4P40480 1083 aa2.66□□□□□ -1.98
SGD1YLR336C YJR008WP47085 338 aa2.66□□□□□ -1.98
SGD1YLR336C MUP1P50276 574 aa2.66□□□□□ -1.98
SGD1YLR336C SND1Q04007 877 aa2.66□□□□□ -1.98
SGD1YLR336C MCM21Q06675 368 aa2.66□□□□□ -1.98
SGD1YLR336C VPS36Q06696 566 aa2.66□□□□□ -1.98
SGD1YLR336C IME1P21190 360 aa2.65□□□□□ -1.98
SGD1YLR336C YKR075CP36155 307 aa2.65□□□□□ -1.98
SGD1YLR336C YNL034WP53963 612 aa2.65□□□□□ -1.98
SGD1YLR336C YNL018CP53976 612 aa2.65□□□□□ -1.98
SGD1YLR336C PTA1Q01329 785 aaPredicted RBP2.65□□□□□ -1.98
SGD1YLR336C REC102Q02721 264 aa2.65□□□□□ -1.98
SGD1YLR336C GAD1Q04792 585 aa2.65□□□□□ -1.98
SGD1YLR336C ECM3Q99252 613 aa2.65□□□□□ -1.98
SGD1YLR336C YPT7P32939 208 aa2.65□□□□□ -1.99
SGD1YLR336C DEF1P35732 738 aaKnown RBP2.65□□□□□ -1.99
SGD1YLR336C BIT2P38346 545 aa2.65□□□□□ -1.99
SGD1YLR336C ELO3P40319 345 aa2.65□□□□□ -1.99
SGD1YLR336C BAP3P41815 604 aa2.65□□□□□ -1.99
SGD1YLR336C NOP9P47077 666 aaKnown RBP2.65□□□□□ -1.99
SGD1YLR336C YMR210WQ03649 449 aa2.65□□□□□ -1.99
SGD1YLR336C SKY1Q03656 742 aa2.65□□□□□ -1.99
SGD1YLR336C DLT1Q04216 342 aa2.65□□□□□ -1.99
SGD1YLR336C ECM38Q05902 660 aaPredicted RBP2.65□□□□□ -1.99
SGD1YLR336C STP4Q07351 490 aa2.65□□□□□ -1.99
SGD1YLR336C YLR040CQ07988 224 aa2.65□□□□□ -1.99
SGD1YLR336C VHS3Q08438 674 aa2.65□□□□□ -1.99
SGD1YLR336C LAT1P12695 482 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C CAF20P12962 161 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C ERG4P25340 473 aa2.64□□□□□ -1.99
SGD1YLR336C HRR25P29295 494 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C EFT1P32324 842 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C HEM12P32347 362 aaPredicted RBP2.64□□□□□ -1.99
SGD1YLR336C TRZ1P36159 838 aaPredicted RBP2.64□□□□□ -1.99
SGD1YLR336C VID28P40547 921 aa2.64□□□□□ -1.99
SGD1YLR336C ATG36P46983 293 aa2.64□□□□□ -1.99
SGD1YLR336C BFA1P47113 574 aa2.64□□□□□ -1.99
SGD1YLR336C COX18P53239 316 aa2.64□□□□□ -1.99
SGD1YLR336C YPR027CQ12079 277 aa2.64□□□□□ -1.99
SGD1YLR336C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
SGD1YLR336C RPS17AP02407 136 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C RPS17BP14127 136 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C FRS1P15624 595 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C COX11P19516 300 aaKnown RBP2.64□□□□□ -1.99
SGD1YLR336C GRX7P38068 203 aa2.64□□□□□ -1.99
SGD1YLR336C FMO1P38866 432 aa2.64□□□□□ -1.99
SGD1YLR336C YIR042CP40586 236 aa2.64□□□□□ -1.99
SGD1YLR336C IES1P43579 692 aa2.64□□□□□ -1.99
SGD1YLR336C AMA1P50082 593 aa2.64□□□□□ -1.99
SGD1YLR336C KIN4Q01919 800 aa2.64□□□□□ -1.99
SGD1YLR336C YOL057WQ08225 711 aa2.64□□□□□ -1.99
SGD1YLR336C IRC13Q08630 104 aa2.64□□□□□ -1.99
SGD1YLR336C MPD2Q99316 277 aa2.64□□□□□ -1.99
SGD1YLR336C MET3P08536 511 aa2.63□□□□□ -1.99
SGD1YLR336C GIP4P39732 760 aa2.63□□□□□ -1.99
SGD1YLR336C RSC8P43609 557 aaKnown RBP2.63□□□□□ -1.99
SGD1YLR336C SPC105P53148 917 aa2.63□□□□□ -1.99
SGD1YLR336C CTK1Q03957 528 aaKnown RBP2.63□□□□□ -1.99
SGD1YLR336C AIM39Q08223 395 aa2.63□□□□□ -1.99
SGD1YLR336C FRE5Q08908 694 aa2.63□□□□□ -1.99
SGD1YLR336C PET127P32606 800 aa2.63□□□□□ -1.99
SGD1YLR336C APT2P36973 181 aa2.63□□□□□ -1.99
SGD1YLR336C BUD8P41698 603 aa2.63□□□□□ -1.99
SGD1YLR336C YJL163CP46996 555 aa2.63□□□□□ -1.99
SGD1YLR336C SGO1Q08490 590 aa2.63□□□□□ -1.99
SGD1YLR336C HXT4P32467 576 aa2.62□□□□□ -1.99
SGD1YLR336C SUL1P38359 859 aa2.62□□□□□ -1.99
SGD1YLR336C BCD1P38772 366 aa2.62□□□□□ -1.99
SGD1YLR336C HRB1P38922 454 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
SGD1YLR336C NUP60P39705 539 aa2.62□□□□□ -1.99
SGD1YLR336C THI22Q06490 572 aa2.62□□□□□ -1.99
SGD1YLR336C ATG11Q12527 1178 aa2.62□□□□□ -1.99
SGD1YLR336C ALG7P07286 448 aa2.62□□□□□ -1.99
SGD1YLR336C PEX1P24004 1043 aa2.62□□□□□ -1.99
SGD1YLR336C YCR015CP25616 317 aa2.62□□□□□ -1.99
SGD1YLR336C MF(ALPHA)2P32435 120 aa2.62□□□□□ -1.99
SGD1YLR336C KTR4P38131 464 aa2.62□□□□□ -1.99
SGD1YLR336C DUN1P39009 513 aa2.62□□□□□ -1.99
SGD1YLR336C BIT61P47041 543 aa2.62□□□□□ -1.99
SGD1YLR336C UBC11P52492 156 aa2.62□□□□□ -1.99
SGD1YLR336C ADY4Q05955 493 aa2.62□□□□□ -1.99
SGD1YLR336C NGL1Q08213 363 aaKnown RBP2.62□□□□□ -1.99
SGD1YLR336C HCA4P20448 770 aaKnown RBP2.62□□□□□ -1.99
SGD1YLR336C PMI40P29952 429 aaKnown RBP2.62□□□□□ -1.99
SGD1YLR336C HIR1P32479 840 aa2.62□□□□□ -1.99
SGD1YLR336C SEC6P32844 805 aa2.62□□□□□ -1.99
SGD1YLR336C EAF5P39995 279 aa2.62□□□□□ -1.99
SGD1YLR336C RNR4P49723 345 aaKnown RBP2.62□□□□□ -1.99
SGD1YLR336C SLD3P53135 668 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms