RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeast

Gene SMD2, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD2	YLR275W	SFB3	P38810	929 aa		4.96	□□□□□ -1.62
SMD2	YLR275W	GET2	P40056	285 aa		4.96	□□□□□ -1.62
SMD2	YLR275W	SET2	P46995	733 aa	Known RBP	4.96	□□□□□ -1.62
SMD2	YLR275W	BRE5	P53741	515 aa	Known RBP	4.96	□□□□□ -1.62
SMD2	YLR275W	GUD1	Q07729	489 aa		4.96	□□□□□ -1.62
SMD2	YLR275W	CDC43	P18898	376 aa		4.95	□□□□□ -1.62
SMD2	YLR275W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
SMD2	YLR275W	MGS1	P40151	587 aa		4.95	□□□□□ -1.62
SMD2	YLR275W	YJR039W	P47107	1121 aa		4.95	□□□□□ -1.62
SMD2	YLR275W	COX18	P53239	316 aa		4.95	□□□□□ -1.62
SMD2	YLR275W	SDA1	P53313	767 aa	Known RBP	4.95	□□□□□ -1.62
SMD2	YLR275W	SMX3	P54999	86 aa	Predicted RBP	4.95	□□□□□ -1.62
SMD2	YLR275W	KIN3	P22209	435 aa		4.94	□□□□□ -1.62
SMD2	YLR275W	NOP9	P47077	666 aa	Known RBP	4.94	□□□□□ -1.62
SMD2	YLR275W	GPD1	Q00055	391 aa	Known RBP	4.94	□□□□□ -1.62
SMD2	YLR275W	UTP14	Q04500	899 aa	Known RBP	4.94	□□□□□ -1.62
SMD2	YLR275W	RGC1	Q06108	1083 aa	Known RBP	4.94	□□□□□ -1.62
SMD2	YLR275W	DCS2	Q12123	353 aa		4.94	□□□□□ -1.62
SMD2	YLR275W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SMD2	YLR275W	GFA1	P14742	717 aa	Known RBP	4.93	□□□□□ -1.62
SMD2	YLR275W	PEX1	P24004	1043 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	PHO11	P35842	467 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	AKL1	P38080	1108 aa	Known RBP	4.93	□□□□□ -1.62
SMD2	YLR275W	PHO12	P38693	467 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	CRP1	P38845	465 aa	Known RBP	4.93	□□□□□ -1.62
SMD2	YLR275W	YNL195C	P40168	261 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	NDC80	P40460	691 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	FHN1	P53279	174 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	DIA2	Q08496	732 aa	Predicted RBP	4.93	□□□□□ -1.62
SMD2	YLR275W	CLF1	Q12309	687 aa	Predicted RBP	4.93	□□□□□ -1.62
SMD2	YLR275W	ECM3	Q99252	613 aa		4.93	□□□□□ -1.62
SMD2	YLR275W	YHR202W	P38887	602 aa		4.92	□□□□□ -1.62
SMD2	YLR275W	ZRT2	Q12436	422 aa		4.92	□□□□□ -1.62
SMD2	YLR275W	ADR1	P07248	1323 aa		4.92	□□□□□ -1.62
SMD2	YLR275W	MAL31	P38156	614 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	YJL206C	P39529	758 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	NUG1	P40010	520 aa	Known RBP	4.91	□□□□□ -1.62
SMD2	YLR275W	ARG2	P40360	574 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	RSC8	P43609	557 aa	Known RBP	4.91	□□□□□ -1.62
SMD2	YLR275W	VPS73	P53142	486 aa	Known RBP	4.91	□□□□□ -1.62
SMD2	YLR275W	DNM1	P54861	757 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	THI22	Q06490	572 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	ISA1	Q07821	250 aa	Predicted RBP	4.91	□□□□□ -1.62
SMD2	YLR275W	MLH3	Q12083	715 aa		4.91	□□□□□ -1.62
SMD2	YLR275W	HCA4	P20448	770 aa	Known RBP	4.9	□□□□□ -1.63
SMD2	YLR275W	DMC1	P25453	334 aa		4.9	□□□□□ -1.63
SMD2	YLR275W	YKR075C	P36155	307 aa		4.9	□□□□□ -1.63
SMD2	YLR275W	HLJ1	P48353	224 aa		4.9	□□□□□ -1.63
SMD2	YLR275W	ATG4	P53867	494 aa		4.9	□□□□□ -1.63
SMD2	YLR275W	SUT2	Q12286	268 aa		4.9	□□□□□ -1.63
SMD2	YLR275W	TAF3	Q12297	353 aa		4.9	□□□□□ -1.63
SMD2	YLR275W	THR1	P17423	357 aa	Known RBP	4.89	□□□□□ -1.63
SMD2	YLR275W	BIT2	P38346	545 aa		4.89	□□□□□ -1.63
SMD2	YLR275W	TDA3	P38758	523 aa		4.89	□□□□□ -1.63
SMD2	YLR275W	BEM4	P39011	633 aa		4.89	□□□□□ -1.63
SMD2	YLR275W	CCT7	P42943	550 aa	Known RBP	4.89	□□□□□ -1.63
SMD2	YLR275W	RET2	P43621	546 aa		4.89	□□□□□ -1.63
SMD2	YLR275W	CTR1	P49573	406 aa		4.89	□□□□□ -1.63
SMD2	YLR275W	ERG20	P08524	352 aa	Known RBP	4.88	□□□□□ -1.63
SMD2	YLR275W	BCS1	P32839	456 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	GLG1	P36143	616 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	CKB2	P38930	258 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	BDH2	P39713	417 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	PIG2	P40187	538 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	TAH11	P47112	604 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	BFA1	P47113	574 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	VHS3	Q08438	674 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	USV1	Q12132	391 aa		4.88	□□□□□ -1.63
SMD2	YLR275W	PRP28	P23394	588 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	IMG2	P25642	146 aa	Predicted RBP	4.87	□□□□□ -1.63
SMD2	YLR275W	PET127	P32606	800 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	SEC6	P32844	805 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	UBS1	P38290	277 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	YIL166C	P40445	542 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	YJR096W	P47137	282 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	VPS36	Q06696	566 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	THI73	Q07904	523 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	POM34	Q12445	299 aa		4.87	□□□□□ -1.63
SMD2	YLR275W	FRS1	P15624	595 aa	Known RBP	4.86	□□□□□ -1.63
SMD2	YLR275W	PRP19	P32523	503 aa	Known RBP	4.86	□□□□□ -1.63
SMD2	YLR275W	FPR3	P38911	411 aa	Known RBP	4.86	□□□□□ -1.63
SMD2	YLR275W	YJR142W	P47173	342 aa		4.86	□□□□□ -1.63
SMD2	YLR275W	YMR210W	Q03649	449 aa		4.86	□□□□□ -1.63
SMD2	YLR275W	CHS5	Q12114	671 aa	Known RBP	4.86	□□□□□ -1.63
SMD2	YLR275W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
SMD2	YLR275W	FEN2	P25621	512 aa	Known RBP	4.85	□□□□□ -1.63
SMD2	YLR275W	YKU70	P32807	602 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	YPT53	P36019	220 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	SET3	P36124	751 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	TYS1	P36421	394 aa	Known RBP	4.85	□□□□□ -1.63
SMD2	YLR275W	ATF1	P40353	525 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	BIT61	P47041	543 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	YLR407W	Q06070	228 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	YGR161W-C	Q3E744	92 aa		4.85	□□□□□ -1.63
SMD2	YLR275W	ABF1	P14164	731 aa		4.84	□□□□□ -1.63
SMD2	YLR275W	SEC15	P22224	910 aa		4.84	□□□□□ -1.63
SMD2	YLR275W	KIN82	P25341	720 aa		4.84	□□□□□ -1.63
SMD2	YLR275W	YPT7	P32939	208 aa		4.84	□□□□□ -1.63
SMD2	YLR275W	PPZ2	P33329	710 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 150.9 ms