RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C YNL193WP53870 558 aa1.88□□□□□ -2.11
IFH1YLR223C ERG5P54781 538 aa1.88□□□□□ -2.11
IFH1YLR223C GPD1Q00055 391 aaKnown RBP1.88□□□□□ -2.11
IFH1YLR223C THI21Q08975 551 aa1.88□□□□□ -2.11
IFH1YLR223C GIN4Q12263 1142 aa1.88□□□□□ -2.11
IFH1YLR223C CLF1Q12309 687 aaPredicted RBP1.88□□□□□ -2.11
IFH1YLR223C YLR149CQ99296 730 aa1.88□□□□□ -2.11
IFH1YLR223C ORC2P32833 620 aa1.88□□□□□ -2.11
IFH1YLR223C APN2P38207 520 aa1.88□□□□□ -2.11
IFH1YLR223C RPL8AP17076 256 aaKnown RBP1.88□□□□□ -2.11
IFH1YLR223C CRP1P38845 465 aaKnown RBP1.88□□□□□ -2.11
IFH1YLR223C PIG2P40187 538 aa1.88□□□□□ -2.11
IFH1YLR223C YJR142WP47173 342 aa1.88□□□□□ -2.11
IFH1YLR223C UBC11P52492 156 aa1.88□□□□□ -2.11
IFH1YLR223C PAN2P53010 1115 aaPredicted RBP1.88□□□□□ -2.11
IFH1YLR223C MET13P53128 600 aa1.88□□□□□ -2.11
IFH1YLR223C ATG33Q06485 197 aa1.88□□□□□ -2.11
IFH1YLR223C USV1Q12132 391 aa1.88□□□□□ -2.11
IFH1YLR223C STE12P13574 688 aa1.87□□□□□ -2.11
IFH1YLR223C PRP19P32523 503 aaKnown RBP1.87□□□□□ -2.11
IFH1YLR223C TAH11P47112 604 aa1.87□□□□□ -2.11
IFH1YLR223C REC102Q02721 264 aa1.87□□□□□ -2.11
IFH1YLR223C FMP30Q02883 468 aa1.87□□□□□ -2.11
IFH1YLR223C ECM3Q99252 613 aa1.87□□□□□ -2.11
IFH1YLR223C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
IFH1YLR223C FPR3P38911 411 aaKnown RBP1.87□□□□□ -2.11
IFH1YLR223C HXT16P47185 567 aa1.87□□□□□ -2.11
IFH1YLR223C ISA1Q07821 250 aaPredicted RBP1.87□□□□□ -2.11
IFH1YLR223C BNR1P40450 1375 aa1.87□□□□□ -2.11
IFH1YLR223C PCL2P25693 308 aa1.86□□□□□ -2.11
IFH1YLR223C TDA3P38758 523 aa1.86□□□□□ -2.11
IFH1YLR223C THI7Q05998 598 aa1.86□□□□□ -2.11
IFH1YLR223C PYC1P11154 1178 aaKnown RBP1.86□□□□□ -2.11
IFH1YLR223C ADE2P21264 571 aaKnown RBP1.86□□□□□ -2.11
IFH1YLR223C APL2P36000 726 aaPredicted RBP1.86□□□□□ -2.11
IFH1YLR223C TYS1P36421 394 aaKnown RBP1.86□□□□□ -2.11
IFH1YLR223C NUP60P39705 539 aa1.86□□□□□ -2.11
IFH1YLR223C BNA2P47125 453 aa1.86□□□□□ -2.11
IFH1YLR223C IMO32P53219 342 aa1.86□□□□□ -2.11
IFH1YLR223C SEC5P89102 971 aa1.86□□□□□ -2.11
IFH1YLR223C UTP14Q04500 899 aaKnown RBP1.86□□□□□ -2.11
IFH1YLR223C AFT2Q08957 416 aa1.86□□□□□ -2.11
IFH1YLR223C MDM20Q12387 796 aaKnown RBP1.86□□□□□ -2.11
IFH1YLR223C RPN13O13563 156 aa1.86□□□□□ -2.11
IFH1YLR223C HOM2P13663 365 aaKnown RBP1.86□□□□□ -2.11
IFH1YLR223C PHO11P35842 467 aa1.86□□□□□ -2.11
IFH1YLR223C PHO12P38693 467 aa1.86□□□□□ -2.11
IFH1YLR223C YHR112CP38716 378 aa1.86□□□□□ -2.11
IFH1YLR223C MCM21Q06675 368 aa1.86□□□□□ -2.11
IFH1YLR223C THI73Q07904 523 aa1.86□□□□□ -2.11
IFH1YLR223C FAP7Q12055 197 aaPredicted RBP1.86□□□□□ -2.11
IFH1YLR223C MDM10P18409 493 aa1.85□□□□□ -2.11
IFH1YLR223C PTP1P25044 335 aa1.85□□□□□ -2.11
IFH1YLR223C PCM1P38628 557 aaKnown RBP1.85□□□□□ -2.11
IFH1YLR223C FMO1P38866 432 aa1.85□□□□□ -2.11
IFH1YLR223C YNL195CP40168 261 aa1.85□□□□□ -2.11
IFH1YLR223C HOS4P40480 1083 aa1.85□□□□□ -2.11
IFH1YLR223C PCL10P53124 433 aa1.85□□□□□ -2.11
IFH1YLR223C ERG20P08524 352 aaKnown RBP1.85□□□□□ -2.11
IFH1YLR223C NUP1P20676 1076 aa1.85□□□□□ -2.11
IFH1YLR223C ILV6P25605 309 aaKnown RBP1.85□□□□□ -2.11
IFH1YLR223C HIR1P32479 840 aa1.85□□□□□ -2.11
IFH1YLR223C YJR096WP47137 282 aa1.85□□□□□ -2.11
IFH1YLR223C YGR153WP48238 217 aa1.85□□□□□ -2.11
IFH1YLR223C ATG4P53867 494 aa1.85□□□□□ -2.11
IFH1YLR223C YDL086WQ07505 273 aa1.85□□□□□ -2.11
IFH1YLR223C RNR1P21524 888 aaKnown RBP1.85□□□□□ -2.11
IFH1YLR223C MNN4P36044 1178 aa1.85□□□□□ -2.11
IFH1YLR223C BDH2P39713 417 aa1.85□□□□□ -2.11
IFH1YLR223C ECM1P39715 212 aa1.85□□□□□ -2.11
IFH1YLR223C YGR237CP50089 785 aa1.85□□□□□ -2.11
IFH1YLR223C SMX3P54999 86 aaPredicted RBP1.85□□□□□ -2.11
IFH1YLR223C ARG5,6Q01217 863 aa1.85□□□□□ -2.11
IFH1YLR223C MIH1P23748 554 aa1.84□□□□□ -2.11
IFH1YLR223C TSR4P25040 408 aa1.84□□□□□ -2.11
IFH1YLR223C GMH1P36125 273 aa1.84□□□□□ -2.11
IFH1YLR223C RIM4P38741 713 aa1.84□□□□□ -2.11
IFH1YLR223C YHR202WP38887 602 aa1.84□□□□□ -2.11
IFH1YLR223C GLO1P50107 326 aa1.84□□□□□ -2.11
IFH1YLR223C UME1Q03010 460 aa1.84□□□□□ -2.11
IFH1YLR223C YMR210WQ03649 449 aa1.84□□□□□ -2.11
IFH1YLR223C YHM2Q04013 314 aa1.84□□□□□ -2.11
IFH1YLR223C ORM2Q06144 216 aa1.84□□□□□ -2.11
IFH1YLR223C YLR001CQ07895 862 aa1.84□□□□□ -2.11
IFH1YLR223C VHS3Q08438 674 aa1.84□□□□□ -2.11
IFH1YLR223C ERG11P10614 530 aa1.84□□□□□ -2.12
IFH1YLR223C NTH1P32356 751 aa1.84□□□□□ -2.12
IFH1YLR223C APL3P38065 1025 aa1.84□□□□□ -2.12
IFH1YLR223C YEN1P40028 759 aa1.84□□□□□ -2.12
IFH1YLR223C YIL077CP40508 320 aa1.84□□□□□ -2.12
IFH1YLR223C NMA2P53204 395 aa1.84□□□□□ -2.12
IFH1YLR223C YGR151CP53287 111 aa1.84□□□□□ -2.12
IFH1YLR223C HOF1Q05080 669 aa1.84□□□□□ -2.12
IFH1YLR223C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
IFH1YLR223C ERG6P25087 383 aaKnown RBP1.83□□□□□ -2.12
IFH1YLR223C ADY2P25613 283 aa1.83□□□□□ -2.12
IFH1YLR223C MRPL9P31334 269 aa1.83□□□□□ -2.12
IFH1YLR223C YKR018CP36114 725 aa1.83□□□□□ -2.12
IFH1YLR223C MIP6P38760 659 aaKnown RBP1.83□□□□□ -2.12
IFH1YLR223C SET2P46995 733 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms