RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W XRN1P22147 1528 aaKnown RBP3.85□□□□□ -1.79
VPS51YKR020W PYC1P11154 1178 aaKnown RBP3.85□□□□□ -1.79
VPS51YKR020W CDC43P18898 376 aa3.85□□□□□ -1.79
VPS51YKR020W MNN4P36044 1178 aa3.85□□□□□ -1.79
VPS51YKR020W TDP1P38319 544 aa3.85□□□□□ -1.79
VPS51YKR020W HRB1P38922 454 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
VPS51YKR020W GET2P40056 285 aa3.85□□□□□ -1.79
VPS51YKR020W YNL195CP40168 261 aa3.85□□□□□ -1.79
VPS51YKR020W SDA1P53313 767 aaKnown RBP3.85□□□□□ -1.79
VPS51YKR020W YNL193WP53870 558 aa3.85□□□□□ -1.79
VPS51YKR020W RGC1Q06108 1083 aaKnown RBP3.85□□□□□ -1.79
VPS51YKR020W GIN4Q12263 1142 aa3.85□□□□□ -1.79
VPS51YKR020W THO2P53552 1597 aaKnown RBP3.85□□□□□ -1.79
VPS51YKR020W YEL1P34225 687 aa3.84□□□□□ -1.79
VPS51YKR020W PHO11P35842 467 aa3.84□□□□□ -1.79
VPS51YKR020W APN2P38207 520 aa3.84□□□□□ -1.79
VPS51YKR020W PHO12P38693 467 aa3.84□□□□□ -1.79
VPS51YKR020W MNN1P39106 762 aa3.84□□□□□ -1.79
VPS51YKR020W YAP1802P53309 568 aa3.84□□□□□ -1.79
VPS51YKR020W COG8Q04632 607 aa3.84□□□□□ -1.79
VPS51YKR020W GUD1Q07729 489 aa3.84□□□□□ -1.79
VPS51YKR020W YLR001CQ07895 862 aa3.84□□□□□ -1.79
VPS51YKR020W GFA1P14742 717 aaKnown RBP3.83□□□□□ -1.8
VPS51YKR020W CCR4P31384 837 aaKnown RBP3.83□□□□□ -1.8
VPS51YKR020W YJL206CP39529 758 aa3.83□□□□□ -1.8
VPS51YKR020W SET2P46995 733 aaKnown RBP3.83□□□□□ -1.8
VPS51YKR020W MET13P53128 600 aa3.83□□□□□ -1.8
VPS51YKR020W BRE5P53741 515 aaKnown RBP3.83□□□□□ -1.8
VPS51YKR020W SMX3P54999 86 aaPredicted RBP3.83□□□□□ -1.8
VPS51YKR020W HMO1Q03973 246 aaKnown RBP3.83□□□□□ -1.8
VPS51YKR020W USV1Q12132 391 aa3.83□□□□□ -1.8
VPS51YKR020W NOP14Q99207 810 aaKnown RBP3.83□□□□□ -1.8
VPS51YKR020W ECM5Q03214 1411 aa3.83□□□□□ -1.8
VPS51YKR020W ADR1P07248 1323 aa3.82□□□□□ -1.8
VPS51YKR020W SIR3P06701 978 aa3.82□□□□□ -1.8
VPS51YKR020W HCA4P20448 770 aaKnown RBP3.82□□□□□ -1.8
VPS51YKR020W YKR075CP36155 307 aa3.82□□□□□ -1.8
VPS51YKR020W YHR202WP38887 602 aa3.82□□□□□ -1.8
VPS51YKR020W NDC80P40460 691 aa3.82□□□□□ -1.8
VPS51YKR020W ORC1P54784 914 aaPredicted RBP3.82□□□□□ -1.8
VPS51YKR020W GPD1Q00055 391 aaKnown RBP3.82□□□□□ -1.8
VPS51YKR020W LGE1Q02796 332 aaKnown RBP3.82□□□□□ -1.8
VPS51YKR020W ISA1Q07821 250 aaPredicted RBP3.82□□□□□ -1.8
VPS51YKR020W DCS2Q12123 353 aa3.82□□□□□ -1.8
VPS51YKR020W ZRT2Q12436 422 aa3.82□□□□□ -1.8
VPS51YKR020W BUD4P47136 1447 aa3.81□□□□□ -1.8
VPS51YKR020W RPL8AP17076 256 aaKnown RBP3.81□□□□□ -1.8
VPS51YKR020W PEX2P32800 271 aa3.81□□□□□ -1.8
VPS51YKR020W PPZ2P33329 710 aa3.81□□□□□ -1.8
VPS51YKR020W SSZ1P38788 538 aaKnown RBP3.81□□□□□ -1.8
VPS51YKR020W ATF1P40353 525 aa3.81□□□□□ -1.8
VPS51YKR020W RSC8P43609 557 aaKnown RBP3.81□□□□□ -1.8
VPS51YKR020W NOP9P47077 666 aaKnown RBP3.81□□□□□ -1.8
VPS51YKR020W YJR039WP47107 1121 aa3.81□□□□□ -1.8
VPS51YKR020W BFA1P47113 574 aa3.81□□□□□ -1.8
VPS51YKR020W VPS73P53142 486 aaKnown RBP3.81□□□□□ -1.8
VPS51YKR020W FHN1P53279 174 aa3.81□□□□□ -1.8
VPS51YKR020W DIA2Q08496 732 aaPredicted RBP3.81□□□□□ -1.8
VPS51YKR020W REV3P14284 1504 aa3.8□□□□□ -1.8
VPS51YKR020W ERG20P08524 352 aaKnown RBP3.8□□□□□ -1.8
VPS51YKR020W THR1P17423 357 aaKnown RBP3.8□□□□□ -1.8
VPS51YKR020W DMC1P25453 334 aa3.8□□□□□ -1.8
VPS51YKR020W CRP1P38845 465 aaKnown RBP3.8□□□□□ -1.8
VPS51YKR020W ARG2P40360 574 aa3.8□□□□□ -1.8
VPS51YKR020W HLJ1P48353 224 aa3.8□□□□□ -1.8
VPS51YKR020W RPS9BP05755 195 aaKnown RBP3.79□□□□□ -1.8
VPS51YKR020W IMG2P25642 146 aaPredicted RBP3.79□□□□□ -1.8
VPS51YKR020W TDA3P38758 523 aa3.79□□□□□ -1.8
VPS51YKR020W NMD2P38798 1089 aaKnown RBP3.79□□□□□ -1.8
VPS51YKR020W BDH2P39713 417 aa3.79□□□□□ -1.8
VPS51YKR020W NUG1P40010 520 aaKnown RBP3.79□□□□□ -1.8
VPS51YKR020W PIG2P40187 538 aa3.79□□□□□ -1.8
VPS51YKR020W GID8P40208 455 aa3.79□□□□□ -1.8
VPS51YKR020W CCT7P42943 550 aaKnown RBP3.79□□□□□ -1.8
VPS51YKR020W CTR1P49573 406 aa3.79□□□□□ -1.8
VPS51YKR020W THI22Q06490 572 aa3.79□□□□□ -1.8
VPS51YKR020W MLH3Q12083 715 aa3.79□□□□□ -1.8
VPS51YKR020W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
VPS51YKR020W SUT2Q12286 268 aa3.79□□□□□ -1.8
VPS51YKR020W CLF1Q12309 687 aaPredicted RBP3.79□□□□□ -1.8
VPS51YKR020W ATG2P53855 1592 aa3.78□□□□□ -1.8
VPS51YKR020W SEC15P22224 910 aa3.78□□□□□ -1.8
VPS51YKR020W PEX1P24004 1043 aa3.78□□□□□ -1.8
VPS51YKR020W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VPS51YKR020W PRP19P32523 503 aaKnown RBP3.78□□□□□ -1.8
VPS51YKR020W AKL1P38080 1108 aaKnown RBP3.78□□□□□ -1.8
VPS51YKR020W MGS1P40151 587 aa3.78□□□□□ -1.8
VPS51YKR020W TAH11P47112 604 aa3.78□□□□□ -1.8
VPS51YKR020W DNM1P54861 757 aa3.78□□□□□ -1.8
VPS51YKR020W UTP14Q04500 899 aaKnown RBP3.78□□□□□ -1.8
VPS51YKR020W VPS36Q06696 566 aa3.78□□□□□ -1.8
VPS51YKR020W MDS3P53094 1487 aa3.78□□□□□ -1.8
VPS51YKR020W BNR1P40450 1375 aa3.77□□□□□ -1.81
VPS51YKR020W SPO11P23179 398 aa3.77□□□□□ -1.81
VPS51YKR020W BCS1P32839 456 aa3.77□□□□□ -1.81
VPS51YKR020W SET3P36124 751 aa3.77□□□□□ -1.81
VPS51YKR020W GLG1P36143 616 aa3.77□□□□□ -1.81
VPS51YKR020W MAL31P38156 614 aa3.77□□□□□ -1.81
VPS51YKR020W BIT2P38346 545 aa3.77□□□□□ -1.81
VPS51YKR020W YIL077CP40508 320 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms