RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeast

Gene SRP21, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP21	YKL122C	RGT1	P32862	1170 aa		4.16	□□□□□ -1.74
SRP21	YKL122C	NMD2	P38798	1089 aa	Known RBP	4.16	□□□□□ -1.74
SRP21	YKL122C	NPY1	P53164	384 aa		4.16	□□□□□ -1.74
SRP21	YKL122C	TFB2	Q02939	513 aa		4.16	□□□□□ -1.74
SRP21	YKL122C	NHX1	Q04121	633 aa		4.16	□□□□□ -1.74
SRP21	YKL122C	YLR001C	Q07895	862 aa		4.16	□□□□□ -1.74
SRP21	YKL122C	PCL2	P25693	308 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	GLG1	P36143	616 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	REV7	P38927	245 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	MNN1	P39106	762 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	ARG2	P40360	574 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	BAP3	P41815	604 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	NET1	P47035	1189 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	MRK1	P50873	501 aa		4.15	□□□□□ -1.75
SRP21	YKL122C	SIR3	P06701	978 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	HMG1	P12683	1054 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	YEL1	P34225	687 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	HSL7	P38274	827 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	YBR259W	P38338	688 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	BPL1	P48445	690 aa	Predicted RBP	4.14	□□□□□ -1.75
SRP21	YKL122C	UBC9	P50623	157 aa	Predicted RBP	4.14	□□□□□ -1.75
SRP21	YKL122C	YBP2	P53169	641 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	MPS1	P54199	764 aa		4.14	□□□□□ -1.75
SRP21	YKL122C	RPN7	Q06103	429 aa	Known RBP	4.14	□□□□□ -1.75
SRP21	YKL122C	NOP14	Q99207	810 aa	Known RBP	4.14	□□□□□ -1.75
SRP21	YKL122C	PYC1	P11154	1178 aa	Known RBP	4.13	□□□□□ -1.75
SRP21	YKL122C	SFL1	P20134	766 aa		4.13	□□□□□ -1.75
SRP21	YKL122C	PCM1	P38628	557 aa	Known RBP	4.13	□□□□□ -1.75
SRP21	YKL122C	DOT6	P40059	670 aa	Known RBP	4.13	□□□□□ -1.75
SRP21	YKL122C	CTR1	P49573	406 aa		4.13	□□□□□ -1.75
SRP21	YKL122C	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
SRP21	YKL122C	AIM14	P53109	570 aa		4.13	□□□□□ -1.75
SRP21	YKL122C	ORC4	P54791	529 aa		4.13	□□□□□ -1.75
SRP21	YKL122C	COG8	Q04632	607 aa		4.13	□□□□□ -1.75
SRP21	YKL122C	ATG33	Q06485	197 aa		4.13	□□□□□ -1.75
SRP21	YKL122C	RPL8A	P17076	256 aa	Known RBP	4.12	□□□□□ -1.75
SRP21	YKL122C	YKR018C	P36114	725 aa		4.12	□□□□□ -1.75
SRP21	YKL122C	UBS1	P38290	277 aa		4.12	□□□□□ -1.75
SRP21	YKL122C	MIP6	P38760	659 aa	Known RBP	4.12	□□□□□ -1.75
SRP21	YKL122C	ECM1	P39715	212 aa		4.12	□□□□□ -1.75
SRP21	YKL122C	PCL10	P53124	433 aa		4.12	□□□□□ -1.75
SRP21	YKL122C	TEX1	P53851	422 aa	Known RBP	4.12	□□□□□ -1.75
SRP21	YKL122C	YNL193W	P53870	558 aa		4.12	□□□□□ -1.75
SRP21	YKL122C	GAD1	Q04792	585 aa		4.12	□□□□□ -1.75
SRP21	YKL122C	ADE2	P21264	571 aa	Known RBP	4.11	□□□□□ -1.75
SRP21	YKL122C	ARP4	P80428	489 aa		4.11	□□□□□ -1.75
SRP21	YKL122C	YKL033W-A	Q86ZR7	236 aa		4.11	□□□□□ -1.75
SRP21	YKL122C	CCR4	P31384	837 aa	Known RBP	4.1	□□□□□ -1.75
SRP21	YKL122C	SFP1	P32432	683 aa		4.1	□□□□□ -1.75
SRP21	YKL122C	APL2	P36000	726 aa	Predicted RBP	4.1	□□□□□ -1.75
SRP21	YKL122C	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
SRP21	YKL122C	ARG5,6	Q01217	863 aa		4.1	□□□□□ -1.75
SRP21	YKL122C	SLK19	Q08581	821 aa	Known RBP	4.1	□□□□□ -1.75
SRP21	YKL122C	GIN4	Q12263	1142 aa		4.1	□□□□□ -1.75
SRP21	YKL122C	PGK1	P00560	416 aa	Known RBP	4.09	□□□□□ -1.75
SRP21	YKL122C	APT2	P36973	181 aa		4.09	□□□□□ -1.75
SRP21	YKL122C	CCT3	P39077	534 aa	Known RBP	4.09	□□□□□ -1.75
SRP21	YKL122C	MET13	P53128	600 aa		4.09	□□□□□ -1.75
SRP21	YKL122C	SDA1	P53313	767 aa	Known RBP	4.09	□□□□□ -1.75
SRP21	YKL122C	UTP14	Q04500	899 aa	Known RBP	4.09	□□□□□ -1.75
SRP21	YKL122C	TDA9	Q04545	1251 aa		4.09	□□□□□ -1.75
SRP21	YKL122C	MCM21	Q06675	368 aa		4.09	□□□□□ -1.75
SRP21	YKL122C	ADR1	P07248	1323 aa		4.09	□□□□□ -1.75
SRP21	YKL122C	ERG11	P10614	530 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	MUP3	P38734	546 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	MGS1	P40151	587 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	YJR142W	P47173	342 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	MTL1	P53214	551 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	DNM1	P54861	757 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	LEE1	Q02799	301 aa	Known RBP	4.08	□□□□□ -1.76
SRP21	YKL122C	GUD1	Q07729	489 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	CIR2	Q08822	631 aa		4.08	□□□□□ -1.76
SRP21	YKL122C	MNN4	P36044	1178 aa		4.07	□□□□□ -1.76
SRP21	YKL122C	TRZ1	P36159	838 aa	Predicted RBP	4.07	□□□□□ -1.76
SRP21	YKL122C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SRP21	YKL122C	XBP1	P40489	647 aa		4.07	□□□□□ -1.76
SRP21	YKL122C	BRE5	P53741	515 aa	Known RBP	4.07	□□□□□ -1.76
SRP21	YKL122C	ATG4	P53867	494 aa		4.07	□□□□□ -1.76
SRP21	YKL122C	HMO1	Q03973	246 aa	Known RBP	4.07	□□□□□ -1.76
SRP21	YKL122C	DCS2	Q12123	353 aa		4.07	□□□□□ -1.76
SRP21	YKL122C	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
SRP21	YKL122C	ERG6	P25087	383 aa	Known RBP	4.06	□□□□□ -1.76
SRP21	YKL122C	SSZ1	P38788	538 aa	Known RBP	4.06	□□□□□ -1.76
SRP21	YKL122C	FMO1	P38866	432 aa		4.06	□□□□□ -1.76
SRP21	YKL122C	FPR3	P38911	411 aa	Known RBP	4.06	□□□□□ -1.76
SRP21	YKL122C	LYS9	P38999	446 aa		4.06	□□□□□ -1.76
SRP21	YKL122C	GID8	P40208	455 aa		4.06	□□□□□ -1.76
SRP21	YKL122C	PAN2	P53010	1115 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP21	YKL122C	CTK1	Q03957	528 aa	Known RBP	4.06	□□□□□ -1.76
SRP21	YKL122C	RNR1	P21524	888 aa	Known RBP	4.05	□□□□□ -1.76
SRP21	YKL122C	MVD1	P32377	396 aa	Known RBP	4.05	□□□□□ -1.76
SRP21	YKL122C	APN2	P38207	520 aa		4.05	□□□□□ -1.76
SRP21	YKL122C	GET2	P40056	285 aa		4.05	□□□□□ -1.76
SRP21	YKL122C	SET2	P46995	733 aa	Known RBP	4.05	□□□□□ -1.76
SRP21	YKL122C	YJR039W	P47107	1121 aa		4.05	□□□□□ -1.76
SRP21	YKL122C	HLJ1	P48353	224 aa		4.05	□□□□□ -1.76
SRP21	YKL122C	REC102	Q02721	264 aa		4.05	□□□□□ -1.76
SRP21	YKL122C	RGC1	Q06108	1083 aa	Known RBP	4.05	□□□□□ -1.76
SRP21	YKL122C	YGR161W-C	Q3E744	92 aa		4.05	□□□□□ -1.76
SRP21	YKL122C	SFB3	P38810	929 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms