RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W THI80P35202 319 aa6.35□□□□□ -1.39
SPC42YKL042W MSS4P38994 779 aa6.35□□□□□ -1.39
SPC42YKL042W MEF2P39677 819 aa6.35□□□□□ -1.39
SPC42YKL042W IES5P40060 125 aa6.35□□□□□ -1.39
SPC42YKL042W CHA4P43634 648 aa6.35□□□□□ -1.39
SPC42YKL042W VPS62P53285 467 aa6.35□□□□□ -1.39
SPC42YKL042W HOL1P53389 586 aa6.35□□□□□ -1.39
SPC42YKL042W CNM67P53865 581 aaKnown RBP6.35□□□□□ -1.39
SPC42YKL042W MRPL22P53881 309 aa6.35□□□□□ -1.39
SPC42YKL042W VPS72Q03388 795 aa6.35□□□□□ -1.39
SPC42YKL042W RPS17AP02407 136 aaKnown RBP6.34□□□□□ -1.39
SPC42YKL042W TUB3P09734 445 aaKnown RBP6.34□□□□□ -1.39
SPC42YKL042W RPS17BP14127 136 aaKnown RBP6.34□□□□□ -1.39
SPC42YKL042W IMG2P25642 146 aaPredicted RBP6.34□□□□□ -1.39
SPC42YKL042W HIS6P40545 261 aa6.34□□□□□ -1.39
SPC42YKL042W PAP2P53632 584 aaKnown RBP6.34□□□□□ -1.39
SPC42YKL042W GCN5Q03330 439 aa6.34□□□□□ -1.39
SPC42YKL042W YAP6Q03935 383 aa6.34□□□□□ -1.39
SPC42YKL042W DUS4Q06063 367 aa6.34□□□□□ -1.39
SPC42YKL042W NOP12Q08208 459 aaKnown RBP6.34□□□□□ -1.39
SPC42YKL042W NPC2Q12408 173 aa6.34□□□□□ -1.39
SPC42YKL042W YLR415CO13578 112 aa6.33□□□□□ -1.4
SPC42YKL042W PRP4P20053 465 aaKnown RBP6.33□□□□□ -1.4
SPC42YKL042W MRS6P32864 603 aaKnown RBP6.33□□□□□ -1.4
SPC42YKL042W DUN1P39009 513 aa6.33□□□□□ -1.4
SPC42YKL042W PRP31P49704 494 aaPredicted RBP6.33□□□□□ -1.4
SPC42YKL042W ISA1Q07821 250 aaPredicted RBP6.33□□□□□ -1.4
SPC42YKL042W PYC1P11154 1178 aaKnown RBP6.32□□□□□ -1.4
SPC42YKL042W CDC26P14724 124 aa6.32□□□□□ -1.4
SPC42YKL042W PTH2P34222 208 aa6.32□□□□□ -1.4
SPC42YKL042W YBR259WP38338 688 aa6.32□□□□□ -1.4
SPC42YKL042W SIC1P38634 284 aa6.32□□□□□ -1.4
SPC42YKL042W YHL041WP38730 149 aa6.32□□□□□ -1.4
SPC42YKL042W GIP4P39732 760 aa6.32□□□□□ -1.4
SPC42YKL042W GID8P40208 455 aa6.32□□□□□ -1.4
SPC42YKL042W IES1P43579 692 aa6.32□□□□□ -1.4
SPC42YKL042W EXG2P52911 562 aa6.32□□□□□ -1.4
SPC42YKL042W OMS1Q06668 471 aa6.32□□□□□ -1.4
SPC42YKL042W PEX19Q07418 342 aa6.32□□□□□ -1.4
SPC42YKL042W ACK1Q07622 623 aaPredicted RBP6.32□□□□□ -1.4
SPC42YKL042W NGL1Q08213 363 aaKnown RBP6.32□□□□□ -1.4
SPC42YKL042W CWC2Q12046 339 aaPredicted RBP6.32□□□□□ -1.4
SPC42YKL042W ADE2P21264 571 aaKnown RBP6.31□□□□□ -1.4
SPC42YKL042W HXT4P32467 576 aa6.31□□□□□ -1.4
SPC42YKL042W APT2P36973 181 aa6.31□□□□□ -1.4
SPC42YKL042W ARG5,6Q01217 863 aa6.31□□□□□ -1.4
SPC42YKL042W YPS7Q06325 596 aa6.31□□□□□ -1.4
SPC42YKL042W CDC20P26309 610 aa6.3□□□□□ -1.4
SPC42YKL042W DGR2P32330 852 aa6.3□□□□□ -1.4
SPC42YKL042W APL2P36000 726 aaPredicted RBP6.3□□□□□ -1.4
SPC42YKL042W KTR4P38131 464 aa6.3□□□□□ -1.4
SPC42YKL042W SRP68P38687 599 aaKnown RBP6.3□□□□□ -1.4
SPC42YKL042W EAF5P39995 279 aa6.3□□□□□ -1.4
SPC42YKL042W ENP2P48234 707 aaKnown RBP6.3□□□□□ -1.4
SPC42YKL042W SPT20P50875 604 aa6.3□□□□□ -1.4
SPC42YKL042W YDR132CQ03900 495 aa6.3□□□□□ -1.4
SPC42YKL042W MCM21Q06675 368 aa6.3□□□□□ -1.4
SPC42YKL042W VHS3Q08438 674 aa6.3□□□□□ -1.4
SPC42YKL042W SGO1Q08490 590 aa6.3□□□□□ -1.4
SPC42YKL042W NUR1Q12066 484 aa6.3□□□□□ -1.4
SPC42YKL042W KCS1Q12494 1050 aa6.3□□□□□ -1.4
SPC42YKL042W PET127P32606 800 aa6.29□□□□□ -1.4
SPC42YKL042W RPP1P38786 293 aa6.29□□□□□ -1.4
SPC42YKL042W NAB3P38996 802 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SPC42YKL042W SAW1P39735 261 aa6.29□□□□□ -1.4
SPC42YKL042W YIL092WP40497 633 aa6.29□□□□□ -1.4
SPC42YKL042W QRI7P43122 407 aa6.29□□□□□ -1.4
SPC42YKL042W REC102Q02721 264 aa6.29□□□□□ -1.4
SPC42YKL042W YDL121CQ07541 149 aa6.29□□□□□ -1.4
SPC42YKL042W YOL114CQ12322 202 aa6.29□□□□□ -1.4
SPC42YKL042W TRM11Q12463 433 aa6.29□□□□□ -1.4
SPC42YKL042W MSS18P08593 268 aa6.28□□□□□ -1.4
SPC42YKL042W PHO81P17442 1178 aa6.28□□□□□ -1.4
SPC42YKL042W PRP6P19735 899 aaPredicted RBP6.28□□□□□ -1.4
SPC42YKL042W HOP1P20050 605 aa6.28□□□□□ -1.4
SPC42YKL042W PHO3P24031 467 aa6.28□□□□□ -1.4
SPC42YKL042W MF(ALPHA)2P32435 120 aa6.28□□□□□ -1.4
SPC42YKL042W PLB1P39105 664 aa6.28□□□□□ -1.4
SPC42YKL042W ECM1P39715 212 aa6.28□□□□□ -1.4
SPC42YKL042W STL1P39932 569 aa6.28□□□□□ -1.4
SPC42YKL042W IRC5P43610 853 aa6.28□□□□□ -1.4
SPC42YKL042W ASK10P48361 1146 aa6.28□□□□□ -1.4
SPC42YKL042W COX18P53239 316 aa6.28□□□□□ -1.4
SPC42YKL042W CEG1Q01159 459 aaPredicted RBP6.28□□□□□ -1.4
SPC42YKL042W MTD1Q02046 320 aaKnown RBP6.28□□□□□ -1.4
SPC42YKL042W SLU7Q02775 382 aaKnown RBP6.28□□□□□ -1.4
SPC42YKL042W NRG1Q03125 231 aa6.28□□□□□ -1.4
SPC42YKL042W YLR224WQ05947 369 aa6.28□□□□□ -1.4
SPC42YKL042W FRS1P15624 595 aaKnown RBP6.27□□□□□ -1.41
SPC42YKL042W APA1P16550 321 aaKnown RBP6.27□□□□□ -1.41
SPC42YKL042W ACO1P19414 778 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
SPC42YKL042W YHR112CP38716 378 aa6.27□□□□□ -1.41
SPC42YKL042W RCR2Q03446 210 aaKnown RBP6.27□□□□□ -1.41
SPC42YKL042W STP4Q07351 490 aa6.27□□□□□ -1.41
SPC42YKL042W PSF3Q12146 194 aa6.27□□□□□ -1.41
SPC42YKL042W RPS13P05756 151 aaKnown RBP6.26□□□□□ -1.41
SPC42YKL042W YEL076C-AP0CX16 216 aa6.26□□□□□ -1.41
SPC42YKL042W YLR464WP0CX17 216 aa6.26□□□□□ -1.41
SPC42YKL042W CAD1P24813 409 aaKnown RBP6.26□□□□□ -1.41
SPC42YKL042W SDS22P36047 338 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms