RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YHR112CP38716 378 aa5.6□□□□□ -1.51
PTM1YKL039W HOS4P40480 1083 aa5.6□□□□□ -1.51
PTM1YKL039W CTF4Q01454 927 aa5.6□□□□□ -1.51
PTM1YKL039W LEE1Q02799 301 aaKnown RBP5.6□□□□□ -1.51
PTM1YKL039W GAD1Q04792 585 aa5.6□□□□□ -1.51
PTM1YKL039W MCM21Q06675 368 aa5.6□□□□□ -1.51
PTM1YKL039W BRN1P38170 754 aa5.59□□□□□ -1.51
PTM1YKL039W GID8P40208 455 aa5.59□□□□□ -1.51
PTM1YKL039W YJL163CP46996 555 aa5.59□□□□□ -1.51
PTM1YKL039W BRE5P53741 515 aaKnown RBP5.59□□□□□ -1.51
PTM1YKL039W DCS2Q12123 353 aa5.59□□□□□ -1.51
PTM1YKL039W MNN4P36044 1178 aa5.59□□□□□ -1.52
PTM1YKL039W BAP3P41815 604 aa5.59□□□□□ -1.52
PTM1YKL039W HMO1Q03973 246 aaKnown RBP5.59□□□□□ -1.52
PTM1YKL039W OMS1Q06668 471 aa5.59□□□□□ -1.52
PTM1YKL039W IRC13Q08630 104 aa5.59□□□□□ -1.52
PTM1YKL039W PPS1P38148 807 aa5.58□□□□□ -1.52
PTM1YKL039W SSZ1P38788 538 aaKnown RBP5.58□□□□□ -1.52
PTM1YKL039W YJR096WP47137 282 aa5.58□□□□□ -1.52
PTM1YKL039W HLJ1P48353 224 aa5.58□□□□□ -1.52
PTM1YKL039W IRC20Q06554 1556 aa5.57□□□□□ -1.52
PTM1YKL039W ERG6P25087 383 aaKnown RBP5.57□□□□□ -1.52
PTM1YKL039W APT2P36973 181 aa5.57□□□□□ -1.52
PTM1YKL039W BCD1P38772 366 aa5.57□□□□□ -1.52
PTM1YKL039W LYS9P38999 446 aa5.57□□□□□ -1.52
PTM1YKL039W YJR039WP47107 1121 aa5.57□□□□□ -1.52
PTM1YKL039W YNR029CP53729 429 aaKnown RBP5.57□□□□□ -1.52
PTM1YKL039W THI73Q07904 523 aa5.57□□□□□ -1.52
PTM1YKL039W HRP1Q99383 534 aaKnown RBP5.57□□□□□ -1.52
PTM1YKL039W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
PTM1YKL039W MTL1P53214 551 aa5.56□□□□□ -1.52
PTM1YKL039W MUK1Q02866 612 aa5.56□□□□□ -1.52
PTM1YKL039W YMR206WQ03695 313 aa5.56□□□□□ -1.52
PTM1YKL039W OAR1P35731 278 aa5.55□□□□□ -1.52
PTM1YKL039W TRZ1P36159 838 aaPredicted RBP5.55□□□□□ -1.52
PTM1YKL039W MOH1P38191 138 aa5.55□□□□□ -1.52
PTM1YKL039W CRP1P38845 465 aaKnown RBP5.55□□□□□ -1.52
PTM1YKL039W SET2P46995 733 aaKnown RBP5.55□□□□□ -1.52
PTM1YKL039W UBC11P52492 156 aa5.55□□□□□ -1.52
PTM1YKL039W APN2P38207 520 aa5.55□□□□□ -1.52
PTM1YKL039W CKB2P38930 258 aa5.55□□□□□ -1.52
PTM1YKL039W REC102Q02721 264 aa5.55□□□□□ -1.52
PTM1YKL039W TY1B-HO13535 1793 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-DR5P0C2I2 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-DR6P0C2I3 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-LR2P0C2I5 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-LR3P0C2I6 1755 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TY1B-PR1P0C2I9 1755 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TY1B-PR2P0C2J0 1756 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-PR3P0C2J1 1755 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TY1B-JR1P47098 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-ML2Q03434 1755 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TY1B-ER1Q03612 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-ML1Q04711 1755 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TY1B-GR2Q12269 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-OLQ12273 1755 aa5.54□□□□□ -1.52
PTM1YKL039W TY1B-PLQ12414 1755 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W MMS1Q06211 1407 aa5.54□□□□□ -1.52
PTM1YKL039W NUP145P49687 1317 aa5.54□□□□□ -1.52
PTM1YKL039W PYC1P11154 1178 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W RNR1P21524 888 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TYS1P36421 394 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W AKL1P38080 1108 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W FMO1P38866 432 aa5.54□□□□□ -1.52
PTM1YKL039W CCT3P39077 534 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W GET2P40056 285 aa5.54□□□□□ -1.52
PTM1YKL039W RET2P43621 546 aa5.54□□□□□ -1.52
PTM1YKL039W GPG1P53130 126 aa5.54□□□□□ -1.52
PTM1YKL039W UME1Q03010 460 aa5.54□□□□□ -1.52
PTM1YKL039W MTQ2Q03920 221 aaPredicted RBP5.54□□□□□ -1.52
PTM1YKL039W CTK1Q03957 528 aaKnown RBP5.54□□□□□ -1.52
PTM1YKL039W TOP2P06786 1428 aaKnown RBP5.53□□□□□ -1.52
PTM1YKL039W PRP19P32523 503 aaKnown RBP5.53□□□□□ -1.52
PTM1YKL039W HIS7P33734 552 aaKnown RBP5.53□□□□□ -1.52
PTM1YKL039W FMP52P40008 231 aa5.53□□□□□ -1.52
PTM1YKL039W NUG1P40010 520 aaKnown RBP5.53□□□□□ -1.52
PTM1YKL039W DAS1P47005 663 aa5.53□□□□□ -1.52
PTM1YKL039W PMT3P47190 753 aa5.53□□□□□ -1.52
PTM1YKL039W RGC1Q06108 1083 aaKnown RBP5.53□□□□□ -1.52
PTM1YKL039W TY2B-BQ12491 1770 aa5.52□□□□□ -1.53
PTM1YKL039W HIR1P32479 840 aa5.52□□□□□ -1.53
PTM1YKL039W BEM4P39011 633 aa5.52□□□□□ -1.53
PTM1YKL039W STB4P50104 949 aa5.52□□□□□ -1.53
PTM1YKL039W ACF2Q12168 779 aa5.52□□□□□ -1.53
PTM1YKL039W SIR3P06701 978 aa5.51□□□□□ -1.53
PTM1YKL039W MAL31P38156 614 aa5.51□□□□□ -1.53
PTM1YKL039W YHL017WP38745 532 aa5.51□□□□□ -1.53
PTM1YKL039W TDA3P38758 523 aa5.51□□□□□ -1.53
PTM1YKL039W NUP60P39705 539 aa5.51□□□□□ -1.53
PTM1YKL039W YNL195CP40168 261 aa5.51□□□□□ -1.53
PTM1YKL039W NOP9P47077 666 aaKnown RBP5.51□□□□□ -1.53
PTM1YKL039W RIA1P53893 1110 aa5.51□□□□□ -1.53
PTM1YKL039W MCH5Q08777 521 aa5.51□□□□□ -1.53
PTM1YKL039W ECM3Q99252 613 aa5.51□□□□□ -1.53
PTM1YKL039W DRS2P39524 1355 aa5.51□□□□□ -1.53
PTM1YKL039W MMS22Q06164 1454 aa5.51□□□□□ -1.53
PTM1YKL039W YHR202WP38887 602 aa5.5□□□□□ -1.53
PTM1YKL039W TEL2P53038 688 aa5.5□□□□□ -1.53
PTM1YKL039W COX18P53239 316 aa5.5□□□□□ -1.53
PTM1YKL039W TRM732Q03496 1420 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms