RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W TIF35Q04067 274 aaKnown RBP6□□□□□ -1.45
CBF1YJR060W VIP1Q06685 1146 aaKnown RBP6□□□□□ -1.45
CBF1YJR060W RKM4Q12504 494 aa6□□□□□ -1.45
CBF1YJR060W YOR111WQ99210 232 aa6□□□□□ -1.45
CBF1YJR060W RAD18P10862 487 aa5.99□□□□□ -1.45
CBF1YJR060W DBP5P20449 482 aaKnown RBP5.99□□□□□ -1.45
CBF1YJR060W ACE2P21192 770 aa5.99□□□□□ -1.45
CBF1YJR060W MSH2P25847 964 aa5.99□□□□□ -1.45
CBF1YJR060W SFP1P32432 683 aa5.99□□□□□ -1.45
CBF1YJR060W SAS3P34218 831 aa5.99□□□□□ -1.45
CBF1YJR060W BMH2P34730 273 aaKnown RBP5.99□□□□□ -1.45
CBF1YJR060W YHL017WP38745 532 aa5.99□□□□□ -1.45
CBF1YJR060W VID28P40547 921 aa5.99□□□□□ -1.45
CBF1YJR060W YIR014WP40570 242 aa5.99□□□□□ -1.45
CBF1YJR060W YGL176CP46945 554 aa5.99□□□□□ -1.45
CBF1YJR060W HDA1P53973 706 aa5.99□□□□□ -1.45
CBF1YJR060W BRE4Q07660 1125 aa5.99□□□□□ -1.45
CBF1YJR060W PSK2Q08217 1101 aa5.99□□□□□ -1.45
CBF1YJR060W ICL2Q12031 575 aa5.99□□□□□ -1.45
CBF1YJR060W SPO21Q12411 609 aa5.99□□□□□ -1.45
CBF1YJR060W RPL8AP17076 256 aaKnown RBP5.98□□□□□ -1.45
CBF1YJR060W SRP54P20424 541 aaKnown RBP5.98□□□□□ -1.45
CBF1YJR060W MLS1P30952 554 aa5.98□□□□□ -1.45
CBF1YJR060W PRO1P32264 428 aa5.98□□□□□ -1.45
CBF1YJR060W YSC84P32793 468 aa5.98□□□□□ -1.45
CBF1YJR060W MCM7P38132 845 aa5.98□□□□□ -1.45
CBF1YJR060W RGD1P38339 666 aa5.98□□□□□ -1.45
CBF1YJR060W PEX7P39108 375 aa5.98□□□□□ -1.45
CBF1YJR060W MXR1P40029 184 aa5.98□□□□□ -1.45
CBF1YJR060W MDM1Q01846 1127 aa5.98□□□□□ -1.45
CBF1YJR060W SSY1Q03770 852 aa5.98□□□□□ -1.45
CBF1YJR060W YDR341CQ05506 607 aaKnown RBP5.98□□□□□ -1.45
CBF1YJR060W GUD1Q07729 489 aa5.98□□□□□ -1.45
CBF1YJR060W NTG2Q08214 380 aa5.98□□□□□ -1.45
CBF1YJR060W DSE3Q08729 430 aa5.98□□□□□ -1.45
CBF1YJR060W RIF1P29539 1916 aa5.97□□□□□ -1.45
CBF1YJR060W CBP3P21560 335 aa5.97□□□□□ -1.45
CBF1YJR060W PUF4P25339 888 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
CBF1YJR060W PWP2P25635 923 aaKnown RBP5.97□□□□□ -1.45
CBF1YJR060W RGT1P32862 1170 aa5.97□□□□□ -1.45
CBF1YJR060W PTC7P38797 343 aa5.97□□□□□ -1.45
CBF1YJR060W MBP1P39678 833 aa5.97□□□□□ -1.45
CBF1YJR060W GTS1P40956 396 aa5.97□□□□□ -1.45
CBF1YJR060W RTA1P53047 317 aa5.97□□□□□ -1.45
CBF1YJR060W HOS3Q02959 697 aaKnown RBP5.97□□□□□ -1.45
CBF1YJR060W SPH1Q06160 661 aa5.97□□□□□ -1.45
CBF1YJR060W MET7Q08645 548 aa5.97□□□□□ -1.45
CBF1YJR060W TY1B-AO13527 1196 aaKnown RBP5.96□□□□□ -1.46
CBF1YJR060W SAM1P10659 382 aaKnown RBP5.96□□□□□ -1.46
CBF1YJR060W SAM35P14693 329 aa5.96□□□□□ -1.46
CBF1YJR060W UTR4P32626 227 aa5.96□□□□□ -1.46
CBF1YJR060W TGL1P34163 548 aa5.96□□□□□ -1.46
CBF1YJR060W RXT2P38255 430 aa5.96□□□□□ -1.46
CBF1YJR060W CCT3P39077 534 aaKnown RBP5.96□□□□□ -1.46
CBF1YJR060W GEM1P39722 662 aa5.96□□□□□ -1.46
CBF1YJR060W HNT2P49775 206 aa5.96□□□□□ -1.46
CBF1YJR060W HSV2P50079 448 aaPredicted RBP5.96□□□□□ -1.46
CBF1YJR060W CEX1Q12453 761 aa5.96□□□□□ -1.46
CBF1YJR060W RPL19AP0CX82 189 aaKnown RBP5.95□□□□□ -1.46
CBF1YJR060W RPL19BP0CX83 189 aaPredicted RBP5.95□□□□□ -1.46
CBF1YJR060W BET3P36149 193 aa5.95□□□□□ -1.46
CBF1YJR060W CCC2P38995 1004 aa5.95□□□□□ -1.46
CBF1YJR060W PSF2P40359 213 aa5.95□□□□□ -1.46
CBF1YJR060W MPH1P40562 993 aa5.95□□□□□ -1.46
CBF1YJR060W EPL1P43572 832 aa5.95□□□□□ -1.46
CBF1YJR060W LIF1P53150 421 aa5.95□□□□□ -1.46
CBF1YJR060W TNA1P53322 534 aa5.95□□□□□ -1.46
CBF1YJR060W UGO1Q03327 502 aa5.95□□□□□ -1.46
CBF1YJR060W YLR407WQ06070 228 aa5.95□□□□□ -1.46
CBF1YJR060W YPL066WQ12194 479 aa5.95□□□□□ -1.46
CBF1YJR060W SES1P07284 462 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W PRE10P21242 288 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
CBF1YJR060W SWI4P25302 1093 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W SRO9P25567 434 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W PAH1P32567 862 aa5.94□□□□□ -1.46
CBF1YJR060W MCR1P36060 302 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W RPN10P38886 268 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W CTF18P49956 741 aa5.94□□□□□ -1.46
CBF1YJR060W FMS1P50264 508 aa5.94□□□□□ -1.46
CBF1YJR060W PEX14P53112 341 aa5.94□□□□□ -1.46
CBF1YJR060W YGL138CP53122 345 aa5.94□□□□□ -1.46
CBF1YJR060W TPO2P53283 614 aa5.94□□□□□ -1.46
CBF1YJR060W BNI5P53890 448 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W TMA64Q04600 565 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W DUS3Q06053 668 aaKnown RBP5.94□□□□□ -1.46
CBF1YJR060W DUS4Q06063 367 aa5.94□□□□□ -1.46
CBF1YJR060W SUE1Q06524 206 aa5.94□□□□□ -1.46
CBF1YJR060W YER152CP10356 443 aa5.93□□□□□ -1.46
CBF1YJR060W HCA4P20448 770 aaKnown RBP5.93□□□□□ -1.46
CBF1YJR060W CDC11P32458 415 aa5.93□□□□□ -1.46
CBF1YJR060W CCZ1P38273 704 aa5.93□□□□□ -1.46
CBF1YJR060W RPN3P40016 523 aaKnown RBP5.93□□□□□ -1.46
CBF1YJR060W PCI8P40512 444 aa5.93□□□□□ -1.46
CBF1YJR060W HLJ1P48353 224 aa5.93□□□□□ -1.46
CBF1YJR060W NRD1P53617 575 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
CBF1YJR060W TFB2Q02939 513 aa5.93□□□□□ -1.46
CBF1YJR060W NBA1Q08229 501 aaKnown RBP5.93□□□□□ -1.46
CBF1YJR060W TOM70P07213 617 aaKnown RBP5.92□□□□□ -1.46
CBF1YJR060W PCT1P13259 424 aa5.92□□□□□ -1.46
CBF1YJR060W TKL1P23254 680 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms