RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SMC6Q12749 1114 aa2.34□□□□□ -2.04
RTT107YHR154W GPM1P00950 247 aaKnown RBP2.33□□□□□ -2.04
RTT107YHR154W BI4P03879 638 aa2.33□□□□□ -2.04
RTT107YHR154W NUC1P08466 329 aa2.33□□□□□ -2.04
RTT107YHR154W HSC82P15108 705 aaKnown RBP2.33□□□□□ -2.04
RTT107YHR154W SPE2P21182 396 aa2.33□□□□□ -2.04
RTT107YHR154W NAM7P30771 971 aaKnown RBP2.33□□□□□ -2.04
RTT107YHR154W SAS3P34218 831 aa2.33□□□□□ -2.04
RTT107YHR154W MUD2P36084 527 aaKnown RBP2.33□□□□□ -2.04
RTT107YHR154W DID4P36108 232 aa2.33□□□□□ -2.04
RTT107YHR154W CCT3P39077 534 aaKnown RBP2.33□□□□□ -2.04
RTT107YHR154W TOK1P40310 691 aa2.33□□□□□ -2.04
RTT107YHR154W SLS1P42900 643 aa2.33□□□□□ -2.04
RTT107YHR154W VPS53P47061 822 aa2.33□□□□□ -2.04
RTT107YHR154W PCL10P53124 433 aa2.33□□□□□ -2.04
RTT107YHR154W TEP1P53916 434 aa2.33□□□□□ -2.04
RTT107YHR154W SKY1Q03656 742 aa2.33□□□□□ -2.04
RTT107YHR154W RCF1Q03713 159 aa2.33□□□□□ -2.04
RTT107YHR154W LCD1Q04377 747 aa2.33□□□□□ -2.04
RTT107YHR154W YLR287CQ05881 355 aa2.33□□□□□ -2.04
RTT107YHR154W ATG33Q06485 197 aa2.33□□□□□ -2.04
RTT107YHR154W OPY2Q06810 360 aa2.33□□□□□ -2.04
RTT107YHR154W AVO1Q08236 1176 aa2.33□□□□□ -2.04
RTT107YHR154W LAP2Q10740 671 aa2.33□□□□□ -2.04
RTT107YHR154W NHA1Q99271 985 aa2.33□□□□□ -2.04
RTT107YHR154W MRP7P12687 371 aa2.33□□□□□ -2.04
RTT107YHR154W DAL5P15365 543 aa2.33□□□□□ -2.04
RTT107YHR154W URA1P28272 314 aaPredicted RBP2.33□□□□□ -2.04
RTT107YHR154W YKL050CP35736 922 aa2.33□□□□□ -2.04
RTT107YHR154W CAB3P36076 571 aa2.33□□□□□ -2.04
RTT107YHR154W HSL7P38274 827 aa2.33□□□□□ -2.04
RTT107YHR154W VPS8P39702 1274 aa2.33□□□□□ -2.04
RTT107YHR154W ASK10P48361 1146 aa2.33□□□□□ -2.04
RTT107YHR154W NPY1P53164 384 aa2.33□□□□□ -2.04
RTT107YHR154W DAM1P53267 343 aa2.33□□□□□ -2.04
RTT107YHR154W HOL1P53389 586 aa2.33□□□□□ -2.04
RTT107YHR154W YNR061CP53747 219 aa2.33□□□□□ -2.04
RTT107YHR154W PEX15Q08215 383 aa2.33□□□□□ -2.04
RTT107YHR154W CLF1Q12309 687 aaPredicted RBP2.33□□□□□ -2.04
RTT107YHR154W HEM13P11353 328 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W RFA1P22336 621 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W FPS1P23900 669 aa2.32□□□□□ -2.04
RTT107YHR154W PDC6P26263 563 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W RAD16P31244 790 aa2.32□□□□□ -2.04
RTT107YHR154W HEM12P32347 362 aaPredicted RBP2.32□□□□□ -2.04
RTT107YHR154W HOG1P32485 435 aa2.32□□□□□ -2.04
RTT107YHR154W REC104P33323 182 aa2.32□□□□□ -2.04
RTT107YHR154W MCD4P36051 919 aa2.32□□□□□ -2.04
RTT107YHR154W SHM1P37292 490 aaPredicted RBP2.32□□□□□ -2.04
RTT107YHR154W GYP8P43570 497 aa2.32□□□□□ -2.04
RTT107YHR154W CTF4Q01454 927 aa2.32□□□□□ -2.04
RTT107YHR154W ECM30Q06673 1274 aa2.32□□□□□ -2.04
RTT107YHR154W DCS2Q12123 353 aa2.32□□□□□ -2.04
RTT107YHR154W RPS9AO13516 197 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W AAC3P18238 307 aa2.32□□□□□ -2.04
RTT107YHR154W SEC65P29478 273 aa2.32□□□□□ -2.04
RTT107YHR154W CCZ1P38273 704 aa2.32□□□□□ -2.04
RTT107YHR154W PCM1P38628 557 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W MXR1P40029 184 aa2.32□□□□□ -2.04
RTT107YHR154W SIP5P40210 489 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W SPO74P45819 413 aa2.32□□□□□ -2.04
RTT107YHR154W PRY1P47032 299 aa2.32□□□□□ -2.04
RTT107YHR154W YNR040WP53736 256 aa2.32□□□□□ -2.04
RTT107YHR154W RPT6Q01939 405 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W HOS3Q02959 697 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W SYF1Q04048 859 aaPredicted RBP2.32□□□□□ -2.04
RTT107YHR154W NHX1Q04121 633 aa2.32□□□□□ -2.04
RTT107YHR154W UTP5Q04177 643 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W RSC2Q06488 889 aa2.32□□□□□ -2.04
RTT107YHR154W SPN1Q06505 410 aaPredicted RBP2.32□□□□□ -2.04
RTT107YHR154W SEC3P33332 1336 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W GLT1Q12680 2145 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W FUS1P11710 512 aa2.32□□□□□ -2.04
RTT107YHR154W BRF1P29056 596 aa2.32□□□□□ -2.04
RTT107YHR154W DPH2P32461 534 aa2.32□□□□□ -2.04
RTT107YHR154W SER1P33330 395 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W RXT2P38255 430 aa2.32□□□□□ -2.04
RTT107YHR154W EXO5P38289 585 aa2.32□□□□□ -2.04
RTT107YHR154W KAP123P40069 1113 aaKnown RBP2.32□□□□□ -2.04
RTT107YHR154W PSF2P40359 213 aa2.32□□□□□ -2.04
RTT107YHR154W UBP7P40453 1071 aa2.32□□□□□ -2.04
RTT107YHR154W YIL092WP40497 633 aa2.32□□□□□ -2.04
RTT107YHR154W GUS1P46655 708 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RTT107YHR154W ENT3P47160 408 aa2.32□□□□□ -2.04
RTT107YHR154W FMP30Q02883 468 aa2.32□□□□□ -2.04
RTT107YHR154W PSH1Q12161 406 aa2.32□□□□□ -2.04
RTT107YHR154W SSK22P25390 1331 aaPredicted RBP2.31□□□□□ -2.04
RTT107YHR154W SUI2P20459 304 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W ANP1P32629 500 aa2.31□□□□□ -2.04
RTT107YHR154W NEM1P38757 446 aa2.31□□□□□ -2.04
RTT107YHR154W APE4P38821 490 aa2.31□□□□□ -2.04
RTT107YHR154W GPB2P39717 880 aa2.31□□□□□ -2.04
RTT107YHR154W KHA1P40309 873 aa2.31□□□□□ -2.04
RTT107YHR154W RAD26P40352 1085 aa2.31□□□□□ -2.04
RTT107YHR154W SAP4P53036 818 aa2.31□□□□□ -2.04
RTT107YHR154W CBK1P53894 756 aa2.31□□□□□ -2.04
RTT107YHR154W TRM44Q02648 567 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W NOG1Q02892 647 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W RMT2Q03305 412 aa2.31□□□□□ -2.04
RTT107YHR154W GNT1Q12096 491 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms