RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W APT2P36973 181 aa3.62□□□□□ -1.83
SSF1YHR066W APN2P38207 520 aa3.62□□□□□ -1.83
SSF1YHR066W YHR202WP38887 602 aa3.62□□□□□ -1.83
SSF1YHR066W BEM4P39011 633 aa3.62□□□□□ -1.83
SSF1YHR066W CCT3P39077 534 aaKnown RBP3.62□□□□□ -1.83
SSF1YHR066W UME1Q03010 460 aa3.62□□□□□ -1.83
SSF1YHR066W CTK1Q03957 528 aaKnown RBP3.62□□□□□ -1.83
SSF1YHR066W ACF2Q12168 779 aa3.62□□□□□ -1.83
SSF1YHR066W AIM44Q99299 758 aa3.62□□□□□ -1.83
SSF1YHR066W YHL017WP38745 532 aa3.61□□□□□ -1.83
SSF1YHR066W HRB1P38922 454 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SSF1YHR066W NUP60P39705 539 aa3.61□□□□□ -1.83
SSF1YHR066W FMP52P40008 231 aa3.61□□□□□ -1.83
SSF1YHR066W RET2P43621 546 aa3.61□□□□□ -1.83
SSF1YHR066W NOP9P47077 666 aaKnown RBP3.61□□□□□ -1.83
SSF1YHR066W PMT3P47190 753 aa3.61□□□□□ -1.83
SSF1YHR066W TMN2Q04562 672 aa3.61□□□□□ -1.83
SSF1YHR066W MCH5Q08777 521 aa3.61□□□□□ -1.83
SSF1YHR066W ECM3Q99252 613 aa3.61□□□□□ -1.83
SSF1YHR066W SIR3P06701 978 aa3.6□□□□□ -1.83
SSF1YHR066W MVD1P32377 396 aaKnown RBP3.6□□□□□ -1.83
SSF1YHR066W TDA3P38758 523 aa3.6□□□□□ -1.83
SSF1YHR066W SFB3P38810 929 aa3.6□□□□□ -1.83
SSF1YHR066W GPP1P41277 250 aaKnown RBP3.6□□□□□ -1.83
SSF1YHR066W PAN2P53010 1115 aaPredicted RBP3.6□□□□□ -1.83
SSF1YHR066W TEL2P53038 688 aa3.6□□□□□ -1.83
SSF1YHR066W COX18P53239 316 aa3.6□□□□□ -1.83
SSF1YHR066W GPD1Q00055 391 aaKnown RBP3.6□□□□□ -1.83
SSF1YHR066W ISA1Q07821 250 aaPredicted RBP3.6□□□□□ -1.83
SSF1YHR066W SGO1Q08490 590 aa3.6□□□□□ -1.83
SSF1YHR066W NUP145P49687 1317 aa3.6□□□□□ -1.83
SSF1YHR066W PEX1P24004 1043 aa3.59□□□□□ -1.83
SSF1YHR066W IMG2P25642 146 aaPredicted RBP3.59□□□□□ -1.83
SSF1YHR066W YPT7P32939 208 aa3.59□□□□□ -1.83
SSF1YHR066W MAL31P38156 614 aa3.59□□□□□ -1.83
SSF1YHR066W PCL5P38794 229 aa3.59□□□□□ -1.83
SSF1YHR066W UBP12P39538 1254 aa3.59□□□□□ -1.83
SSF1YHR066W CCT5P40413 562 aaKnown RBP3.59□□□□□ -1.83
SSF1YHR066W RSC8P43609 557 aaKnown RBP3.59□□□□□ -1.83
SSF1YHR066W DAS1P47005 663 aa3.59□□□□□ -1.83
SSF1YHR066W YGR237CP50089 785 aa3.59□□□□□ -1.83
SSF1YHR066W RIA1P53893 1110 aa3.59□□□□□ -1.83
SSF1YHR066W ECM9Q02202 377 aa3.59□□□□□ -1.83
SSF1YHR066W VPS36Q06696 566 aa3.59□□□□□ -1.83
SSF1YHR066W RPS21BQ3E754 87 aaKnown RBP3.59□□□□□ -1.83
SSF1YHR066W YKU70P32807 602 aa3.58□□□□□ -1.84
SSF1YHR066W MTH1P35198 433 aa3.58□□□□□ -1.84
SSF1YHR066W REV7P38927 245 aa3.58□□□□□ -1.84
SSF1YHR066W HXT6P39003 570 aaKnown RBP3.58□□□□□ -1.84
SSF1YHR066W HXT7P39004 570 aa3.58□□□□□ -1.84
SSF1YHR066W OAF1P39720 1047 aaPredicted RBP3.58□□□□□ -1.84
SSF1YHR066W SDS3P40505 327 aa3.58□□□□□ -1.84
SSF1YHR066W GZF3P42944 551 aaKnown RBP3.58□□□□□ -1.84
SSF1YHR066W YGR153WP48238 217 aa3.58□□□□□ -1.84
SSF1YHR066W YLR407WQ06070 228 aa3.58□□□□□ -1.84
SSF1YHR066W THI22Q06490 572 aa3.58□□□□□ -1.84
SSF1YHR066W MLH3Q12083 715 aa3.58□□□□□ -1.84
SSF1YHR066W YKL033W-AQ86ZR7 236 aa3.58□□□□□ -1.84
SSF1YHR066W SWI6P09959 803 aa3.57□□□□□ -1.84
SSF1YHR066W SEC6P32844 805 aa3.57□□□□□ -1.84
SSF1YHR066W PHO11P35842 467 aa3.57□□□□□ -1.84
SSF1YHR066W YKR075CP36155 307 aa3.57□□□□□ -1.84
SSF1YHR066W PHO12P38693 467 aa3.57□□□□□ -1.84
SSF1YHR066W UBA2P52488 636 aa3.57□□□□□ -1.84
SSF1YHR066W FHN1P53279 174 aa3.57□□□□□ -1.84
SSF1YHR066W GND2P53319 492 aa3.57□□□□□ -1.84
SSF1YHR066W TIM44Q01852 431 aa3.57□□□□□ -1.84
SSF1YHR066W RCR2Q03446 210 aaKnown RBP3.57□□□□□ -1.84
SSF1YHR066W YPS7Q06325 596 aa3.57□□□□□ -1.84
SSF1YHR066W HBT1Q07653 1046 aaKnown RBP3.57□□□□□ -1.84
SSF1YHR066W VHS3Q08438 674 aa3.57□□□□□ -1.84
SSF1YHR066W YTM1Q12024 460 aaPredicted RBP3.57□□□□□ -1.84
SSF1YHR066W FAP7Q12055 197 aaPredicted RBP3.57□□□□□ -1.84
SSF1YHR066W RPS21AP0C0V8 87 aaKnown RBP3.56□□□□□ -1.84
SSF1YHR066W IME1P21190 360 aa3.56□□□□□ -1.84
SSF1YHR066W PET127P32606 800 aa3.56□□□□□ -1.84
SSF1YHR066W BCS1P32839 456 aa3.56□□□□□ -1.84
SSF1YHR066W UBS1P38290 277 aa3.56□□□□□ -1.84
SSF1YHR066W SNM1P40993 198 aa3.56□□□□□ -1.84
SSF1YHR066W YAP1802P53309 568 aa3.56□□□□□ -1.84
SSF1YHR066W SSL2Q00578 843 aa3.56□□□□□ -1.84
SSF1YHR066W YMR210WQ03649 449 aa3.56□□□□□ -1.84
SSF1YHR066W HFD1Q04458 532 aa3.56□□□□□ -1.84
SSF1YHR066W HFI1Q12060 488 aa3.56□□□□□ -1.84
SSF1YHR066W ZRT2Q12436 422 aa3.56□□□□□ -1.84
SSF1YHR066W FRS1P15624 595 aaKnown RBP3.55□□□□□ -1.84
SSF1YHR066W SEC65P29478 273 aa3.55□□□□□ -1.84
SSF1YHR066W GRX4P32642 244 aa3.55□□□□□ -1.84
SSF1YHR066W OAF3P36023 863 aa3.55□□□□□ -1.84
SSF1YHR066W FAT1P38225 669 aa3.55□□□□□ -1.84
SSF1YHR066W BIT2P38346 545 aa3.55□□□□□ -1.84
SSF1YHR066W CBR1P38626 284 aaKnown RBP3.55□□□□□ -1.84
SSF1YHR066W YEN1P40028 759 aa3.55□□□□□ -1.84
SSF1YHR066W MNN11P46985 422 aaKnown RBP3.55□□□□□ -1.84
SSF1YHR066W BIT61P47041 543 aa3.55□□□□□ -1.84
SSF1YHR066W YGL081WP53156 320 aa3.55□□□□□ -1.84
SSF1YHR066W SMX3P54999 86 aaPredicted RBP3.55□□□□□ -1.84
SSF1YHR066W IRC10Q08118 586 aa3.55□□□□□ -1.84
SSF1YHR066W DIA2Q08496 732 aaPredicted RBP3.55□□□□□ -1.84
SSF1YHR066W MRH1Q12117 320 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms