RNA–Protein interactions for RNA: YER072W

VTC1, Transcript of Subunit of the vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC1, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC1	YER072W	STM1	P39015	273 aa	Known RBP	2.67	□□□□□ -1.98
VTC1	YER072W	POL32	P47110	350 aa		2.67	□□□□□ -1.98
VTC1	YER072W	AZR1	P50080	613 aa		2.67	□□□□□ -1.98
VTC1	YER072W	LSB1	P53281	241 aa		2.67	□□□□□ -1.98
VTC1	YER072W	FOL1	P53848	824 aa		2.67	□□□□□ -1.98
VTC1	YER072W	RPS15	Q01855	142 aa	Known RBP	2.67	□□□□□ -1.98
VTC1	YER072W	VPS30	Q02948	557 aa		2.67	□□□□□ -1.98
VTC1	YER072W	ESF1	Q06344	628 aa	Known RBP	2.67	□□□□□ -1.98
VTC1	YER072W	IRC10	Q08118	586 aa		2.67	□□□□□ -1.98
VTC1	YER072W	MCH5	Q08777	521 aa		2.67	□□□□□ -1.98
VTC1	YER072W	NDJ1	Q12366	352 aa		2.67	□□□□□ -1.98
VTC1	YER072W	CHO2	P05374	869 aa	Known RBP	2.66	□□□□□ -1.98
VTC1	YER072W	NUC1	P08466	329 aa		2.66	□□□□□ -1.98
VTC1	YER072W	SWI6	P09959	803 aa		2.66	□□□□□ -1.98
VTC1	YER072W	MAS2	P11914	482 aa		2.66	□□□□□ -1.98
VTC1	YER072W	ACE2	P21192	770 aa		2.66	□□□□□ -1.98
VTC1	YER072W	RIT1	P23796	513 aa		2.66	□□□□□ -1.98
VTC1	YER072W	CAD1	P24813	409 aa	Known RBP	2.66	□□□□□ -1.98
VTC1	YER072W	FUB1	P25659	250 aa		2.66	□□□□□ -1.98
VTC1	YER072W	SYN8	P31377	255 aa		2.66	□□□□□ -1.98
VTC1	YER072W	ALG3	P38179	458 aa		2.66	□□□□□ -1.98
VTC1	YER072W	ERP5	P38819	212 aa		2.66	□□□□□ -1.98
VTC1	YER072W	ALD5	P40047	520 aa	Known RBP	2.66	□□□□□ -1.98
VTC1	YER072W	STB4	P50104	949 aa		2.66	□□□□□ -1.98
VTC1	YER072W	SAM37	P50110	327 aa		2.66	□□□□□ -1.98
VTC1	YER072W	LIF1	P53150	421 aa		2.66	□□□□□ -1.98
VTC1	YER072W	PIB2	P53191	635 aa		2.66	□□□□□ -1.98
VTC1	YER072W	MRPS35	P53292	345 aa		2.66	□□□□□ -1.98
VTC1	YER072W	MSC2	Q03455	724 aa		2.66	□□□□□ -1.98
VTC1	YER072W	SKY1	Q03656	742 aa		2.66	□□□□□ -1.98
VTC1	YER072W	EST2	Q06163	884 aa		2.66	□□□□□ -1.98
VTC1	YER072W	BRE1	Q07457	700 aa	Known RBP	2.66	□□□□□ -1.98
VTC1	YER072W	GPI13	Q07830	1017 aa		2.66	□□□□□ -1.98
VTC1	YER072W	AFT2	Q08957	416 aa		2.66	□□□□□ -1.98
VTC1	YER072W	RKM4	Q12504	494 aa		2.66	□□□□□ -1.98
VTC1	YER072W	YBL113C	Q7M4S9	792 aa		2.66	□□□□□ -1.98
VTC1	YER072W	CDC16	P09798	840 aa		2.65	□□□□□ -1.99
VTC1	YER072W	RPL8B	P29453	256 aa	Known RBP	2.65	□□□□□ -1.99
VTC1	YER072W	PEP7	P32609	515 aa		2.65	□□□□□ -1.99
VTC1	YER072W	ANP1	P32629	500 aa		2.65	□□□□□ -1.99
VTC1	YER072W	PEX2	P32800	271 aa		2.65	□□□□□ -1.99
VTC1	YER072W	TVP23	P38962	199 aa		2.65	□□□□□ -1.99
VTC1	YER072W	DAK2	P43550	591 aa		2.65	□□□□□ -1.99
VTC1	YER072W	RPS7B	P48164	190 aa	Known RBP	2.65	□□□□□ -1.99
VTC1	YER072W	FMS1	P50264	508 aa		2.65	□□□□□ -1.99
VTC1	YER072W	VID30	P53076	958 aa		2.65	□□□□□ -1.99
VTC1	YER072W	YGL140C	P53120	1219 aa		2.65	□□□□□ -1.99
VTC1	YER072W	MET13	P53128	600 aa		2.65	□□□□□ -1.99
VTC1	YER072W	YNL034W	P53963	612 aa		2.65	□□□□□ -1.99
VTC1	YER072W	YNL018C	P53976	612 aa		2.65	□□□□□ -1.99
VTC1	YER072W	PTA1	Q01329	785 aa	Predicted RBP	2.65	□□□□□ -1.99
VTC1	YER072W	RPT6	Q01939	405 aa	Known RBP	2.65	□□□□□ -1.99
VTC1	YER072W	ECM16	Q04217	1267 aa	Known RBP	2.65	□□□□□ -1.99
VTC1	YER072W	EMI2	Q04409	500 aa	Known RBP	2.65	□□□□□ -1.99
VTC1	YER072W	TPO1	Q07824	586 aa		2.65	□□□□□ -1.99
VTC1	YER072W	YLR040C	Q07988	224 aa		2.65	□□□□□ -1.99
VTC1	YER072W	YAP7	Q08182	245 aa		2.65	□□□□□ -1.99
VTC1	YER072W	YOL073C	Q08232	322 aa		2.65	□□□□□ -1.99
VTC1	YER072W	SSF2	Q12153	453 aa	Predicted RBP	2.65	□□□□□ -1.99
VTC1	YER072W	YLL058W	Q12198	575 aa		2.65	□□□□□ -1.99
VTC1	YER072W	ATG11	Q12527	1178 aa		2.65	□□□□□ -1.99
VTC1	YER072W	TRL1	P09880	827 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	MSD1	P15179	658 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	KIN82	P25341	720 aa		2.64	□□□□□ -1.99
VTC1	YER072W	URK1	P27515	501 aa		2.64	□□□□□ -1.99
VTC1	YER072W	HEM3	P28789	327 aa		2.64	□□□□□ -1.99
VTC1	YER072W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
VTC1	YER072W	STB5	P38699	743 aa		2.64	□□□□□ -1.99
VTC1	YER072W	CIC1	P38779	376 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	CRG1	P38892	291 aa	RIP-Chip data	2.64	□□□□□ -1.99	not detected
VTC1	YER072W	HMF1	P40037	129 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	FMP10	P40098	244 aa		2.64	□□□□□ -1.99
VTC1	YER072W	MND2	P40577	368 aa		2.64	□□□□□ -1.99
VTC1	YER072W	MET12	P46151	657 aa		2.64	□□□□□ -1.99
VTC1	YER072W	ART5	P53244	586 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	MYO5	Q04439	1219 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	SUE1	Q06524	206 aa		2.64	□□□□□ -1.99
VTC1	YER072W	TOR2	P32600	2474 aa	Known RBP	2.64	□□□□□ -1.99
VTC1	YER072W	FAB1	P34756	2278 aa		2.63	□□□□□ -1.99
VTC1	YER072W	HIS5	P07172	385 aa		2.63	□□□□□ -1.99
VTC1	YER072W	SES1	P07284	462 aa	Known RBP	2.63	□□□□□ -1.99
VTC1	YER072W	RPL8A	P17076	256 aa	Known RBP	2.63	□□□□□ -1.99
VTC1	YER072W	SRP54	P20424	541 aa	Known RBP	2.63	□□□□□ -1.99
VTC1	YER072W	MAK31	P23059	88 aa		2.63	□□□□□ -1.99
VTC1	YER072W	EFT1	P32324	842 aa	Known RBP	2.63	□□□□□ -1.99
VTC1	YER072W	MSS51	P32335	436 aa		2.63	□□□□□ -1.99
VTC1	YER072W	RME1	P32338	300 aa	Known RBP	2.63	□□□□□ -1.99
VTC1	YER072W	BUD2	P33314	1104 aa		2.63	□□□□□ -1.99
VTC1	YER072W	SUL1	P38359	859 aa		2.63	□□□□□ -1.99
VTC1	YER072W	NDT80	P38830	627 aa		2.63	□□□□□ -1.99
VTC1	YER072W	TPM2	P40414	161 aa		2.63	□□□□□ -1.99
VTC1	YER072W	MDJ2	P42834	146 aa		2.63	□□□□□ -1.99
VTC1	YER072W	ALG2	P43636	503 aa		2.63	□□□□□ -1.99
VTC1	YER072W	CTR1	P49573	406 aa		2.63	□□□□□ -1.99
VTC1	YER072W	MDR1	P53258	950 aa		2.63	□□□□□ -1.99
VTC1	YER072W	HDA1	P53973	706 aa		2.63	□□□□□ -1.99
VTC1	YER072W	MMR1	Q06324	491 aa		2.63	□□□□□ -1.99
VTC1	YER072W	SPN1	Q06505	410 aa	Predicted RBP	2.63	□□□□□ -1.99
VTC1	YER072W	VIP1	Q06685	1146 aa	Known RBP	2.63	□□□□□ -1.99
VTC1	YER072W	ADY3	Q07732	790 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms