RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C GPR1Q12361 961 aa4.07□□□□□ -1.76
VAB2YEL005C ATG11Q12527 1178 aa4.07□□□□□ -1.76
VAB2YEL005C ERG20P08524 352 aaKnown RBP4.06□□□□□ -1.76
VAB2YEL005C KAR1P11927 433 aa4.06□□□□□ -1.76
VAB2YEL005C SEC65P29478 273 aa4.06□□□□□ -1.76
VAB2YEL005C EUG1P32474 517 aa4.06□□□□□ -1.76
VAB2YEL005C GRX7P38068 203 aa4.06□□□□□ -1.76
VAB2YEL005C KTR4P38131 464 aa4.06□□□□□ -1.76
VAB2YEL005C PAF1P38351 445 aa4.06□□□□□ -1.76
VAB2YEL005C SUL1P38359 859 aa4.06□□□□□ -1.76
VAB2YEL005C YIR042CP40586 236 aa4.06□□□□□ -1.76
VAB2YEL005C RNR4P49723 345 aaKnown RBP4.06□□□□□ -1.76
VAB2YEL005C BRE5P53741 515 aaKnown RBP4.06□□□□□ -1.76
VAB2YEL005C FOL1P53848 824 aa4.06□□□□□ -1.76
VAB2YEL005C ECM9Q02202 377 aa4.06□□□□□ -1.76
VAB2YEL005C RNT1Q02555 471 aa4.06□□□□□ -1.76
VAB2YEL005C TMN2Q04562 672 aa4.06□□□□□ -1.76
VAB2YEL005C VHS3Q08438 674 aa4.06□□□□□ -1.76
VAB2YEL005C TGL5Q12043 749 aa4.06□□□□□ -1.76
VAB2YEL005C LAT1P12695 482 aaKnown RBP4.05□□□□□ -1.76
VAB2YEL005C ERG4P25340 473 aa4.05□□□□□ -1.76
VAB2YEL005C YHR112CP38716 378 aa4.05□□□□□ -1.76
VAB2YEL005C DUN1P39009 513 aa4.05□□□□□ -1.76
VAB2YEL005C DUG1P43616 481 aaKnown RBP4.05□□□□□ -1.76
VAB2YEL005C MUP1P50276 574 aa4.05□□□□□ -1.76
VAB2YEL005C PEX14P53112 341 aa4.05□□□□□ -1.76
VAB2YEL005C YPR027CQ12079 277 aa4.05□□□□□ -1.76
VAB2YEL005C HCA4P20448 770 aaKnown RBP4.04□□□□□ -1.76
VAB2YEL005C RNR1P21524 888 aaKnown RBP4.04□□□□□ -1.76
VAB2YEL005C HIS7P33734 552 aaKnown RBP4.04□□□□□ -1.76
VAB2YEL005C AKL1P38080 1108 aaKnown RBP4.04□□□□□ -1.76
VAB2YEL005C YBR071WP38243 211 aa4.04□□□□□ -1.76
VAB2YEL005C REV7P38927 245 aa4.04□□□□□ -1.76
VAB2YEL005C STU2P46675 888 aa4.04□□□□□ -1.76
VAB2YEL005C YJR120WP47157 116 aa4.04□□□□□ -1.76
VAB2YEL005C SPC105P53148 917 aa4.04□□□□□ -1.76
VAB2YEL005C MRPS35P53292 345 aa4.04□□□□□ -1.76
VAB2YEL005C TEX1P53851 422 aaKnown RBP4.04□□□□□ -1.76
VAB2YEL005C VBA4Q04602 768 aaKnown RBP4.04□□□□□ -1.76
VAB2YEL005C YLR407WQ06070 228 aa4.04□□□□□ -1.76
VAB2YEL005C FRE5Q08908 694 aa4.04□□□□□ -1.76
VAB2YEL005C LAS17Q12446 633 aa4.04□□□□□ -1.76
VAB2YEL005C RPS9BP05755 195 aaKnown RBP4.03□□□□□ -1.76
VAB2YEL005C PRP22P24384 1145 aaKnown RBP4.03□□□□□ -1.76
VAB2YEL005C IMG2P25642 146 aaPredicted RBP4.03□□□□□ -1.76
VAB2YEL005C OAF3P36023 863 aa4.03□□□□□ -1.76
VAB2YEL005C NUG1P40010 520 aaKnown RBP4.03□□□□□ -1.76
VAB2YEL005C RPS21BQ3E754 87 aaKnown RBP4.03□□□□□ -1.76
VAB2YEL005C ALG7P07286 448 aa4.02□□□□□ -1.77
VAB2YEL005C MVD1P32377 396 aaKnown RBP4.02□□□□□ -1.77
VAB2YEL005C PET127P32606 800 aa4.02□□□□□ -1.77
VAB2YEL005C CCT3P39077 534 aaKnown RBP4.02□□□□□ -1.77
VAB2YEL005C EMP65P40085 556 aa4.02□□□□□ -1.77
VAB2YEL005C PEA2P40091 420 aa4.02□□□□□ -1.77
VAB2YEL005C DAS1P47005 663 aa4.02□□□□□ -1.77
VAB2YEL005C ENP2P48234 707 aaKnown RBP4.02□□□□□ -1.77
VAB2YEL005C SLD3P53135 668 aa4.02□□□□□ -1.77
VAB2YEL005C NOP15P53927 220 aaPredicted RBP4.02□□□□□ -1.77
VAB2YEL005C LEE1Q02799 301 aaKnown RBP4.02□□□□□ -1.77
VAB2YEL005C SKY1Q03656 742 aa4.02□□□□□ -1.77
VAB2YEL005C PPN1Q04119 674 aa4.02□□□□□ -1.77
VAB2YEL005C IOC4Q04213 475 aa4.02□□□□□ -1.77
VAB2YEL005C ECM3Q99252 613 aa4.02□□□□□ -1.77
VAB2YEL005C RPS17AP02407 136 aaKnown RBP4.01□□□□□ -1.77
VAB2YEL005C SWI6P09959 803 aa4.01□□□□□ -1.77
VAB2YEL005C RPS17BP14127 136 aaKnown RBP4.01□□□□□ -1.77
VAB2YEL005C FRS1P15624 595 aaKnown RBP4.01□□□□□ -1.77
VAB2YEL005C KIN82P25341 720 aa4.01□□□□□ -1.77
VAB2YEL005C YKU70P32807 602 aa4.01□□□□□ -1.77
VAB2YEL005C TFC4P33339 1025 aa4.01□□□□□ -1.77
VAB2YEL005C BIT2P38346 545 aa4.01□□□□□ -1.77
VAB2YEL005C HXT6P39003 570 aaKnown RBP4.01□□□□□ -1.77
VAB2YEL005C HXT7P39004 570 aa4.01□□□□□ -1.77
VAB2YEL005C BEM4P39011 633 aa4.01□□□□□ -1.77
VAB2YEL005C NUP60P39705 539 aa4.01□□□□□ -1.77
VAB2YEL005C GID8P40208 455 aa4.01□□□□□ -1.77
VAB2YEL005C YJL163CP46996 555 aa4.01□□□□□ -1.77
VAB2YEL005C COG6P53959 839 aa4.01□□□□□ -1.77
VAB2YEL005C ERG5P54781 538 aa4.01□□□□□ -1.77
VAB2YEL005C TIM44Q01852 431 aa4.01□□□□□ -1.77
VAB2YEL005C HFI1Q12060 488 aa4.01□□□□□ -1.77
VAB2YEL005C CLF1Q12309 687 aaPredicted RBP4.01□□□□□ -1.77
VAB2YEL005C APM4Q99186 491 aa4.01□□□□□ -1.77
VAB2YEL005C PPR1P07272 904 aaPredicted RBP4□□□□□ -1.77
VAB2YEL005C RPS21AP0C0V8 87 aaKnown RBP4□□□□□ -1.77
VAB2YEL005C GLN4P13188 809 aaKnown RBP4□□□□□ -1.77
VAB2YEL005C YBR053CP38235 358 aa4□□□□□ -1.77
VAB2YEL005C GPP2P40106 250 aaKnown RBP4□□□□□ -1.77
VAB2YEL005C YNL195CP40168 261 aa4□□□□□ -1.77
VAB2YEL005C PXA1P41909 870 aa4□□□□□ -1.77
VAB2YEL005C NIT2P47016 307 aa4□□□□□ -1.77
VAB2YEL005C MTL1P53214 551 aa4□□□□□ -1.77
VAB2YEL005C PHM6Q05637 104 aa4□□□□□ -1.77
VAB2YEL005C ADY4Q05955 493 aa4□□□□□ -1.77
VAB2YEL005C YLR040CQ07988 224 aa4□□□□□ -1.77
VAB2YEL005C TMA7Q3E764 64 aaKnown RBP4□□□□□ -1.77
VAB2YEL005C COX11P19516 300 aaKnown RBP3.99□□□□□ -1.77
VAB2YEL005C DGR2P32330 852 aa3.99□□□□□ -1.77
VAB2YEL005C DAL3P32459 195 aa3.99□□□□□ -1.77
VAB2YEL005C BCD1P38772 366 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms