RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeast

Gene IRC4, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC4	YDR540C	YTM1	Q12024	460 aa	Predicted RBP	3.22	□□□□□ -1.89
IRC4	YDR540C	APM4	Q99186	491 aa		3.22	□□□□□ -1.89
IRC4	YDR540C	HRP1	Q99383	534 aa	Known RBP	3.22	□□□□□ -1.89
IRC4	YDR540C	ALG7	P07286	448 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	SWI6	P09959	803 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	ERG6	P25087	383 aa	Known RBP	3.21	□□□□□ -1.9
IRC4	YDR540C	TRZ1	P36159	838 aa	Predicted RBP	3.21	□□□□□ -1.9
IRC4	YDR540C	APT2	P36973	181 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	SUL1	P38359	859 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	HXT6	P39003	570 aa	Known RBP	3.21	□□□□□ -1.9
IRC4	YDR540C	HXT7	P39004	570 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	MNN11	P46985	422 aa	Known RBP	3.21	□□□□□ -1.9
IRC4	YDR540C	YJL163C	P46996	555 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	ECM9	Q02202	377 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	REC102	Q02721	264 aa		3.21	□□□□□ -1.9
IRC4	YDR540C	RNR1	P21524	888 aa	Known RBP	3.2	□□□□□ -1.9
IRC4	YDR540C	IMG2	P25642	146 aa	Predicted RBP	3.2	□□□□□ -1.9
IRC4	YDR540C	OAF3	P36023	863 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	PAF1	P38351	445 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	BCD1	P38772	366 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	FMO1	P38866	432 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	YHR202W	P38887	602 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	CCT3	P39077	534 aa	Known RBP	3.2	□□□□□ -1.9
IRC4	YDR540C	GET2	P40056	285 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	STU2	P46675	888 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	MTL1	P53214	551 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	GPD1	Q00055	391 aa	Known RBP	3.2	□□□□□ -1.9
IRC4	YDR540C	IRC13	Q08630	104 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	HFI1	Q12060	488 aa		3.2	□□□□□ -1.9
IRC4	YDR540C	RPS21B	Q3E754	87 aa	Known RBP	3.2	□□□□□ -1.9
IRC4	YDR540C	SIR3	P06701	978 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	YKU70	P32807	602 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	DID4	P36108	232 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	YKR075C	P36155	307 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	NOP9	P47077	666 aa	Known RBP	3.19	□□□□□ -1.9
IRC4	YDR540C	UBC11	P52492	156 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	CTK1	Q03957	528 aa	Known RBP	3.19	□□□□□ -1.9
IRC4	YDR540C	YLR407W	Q06070	228 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	RGC1	Q06108	1083 aa	Known RBP	3.19	□□□□□ -1.9
IRC4	YDR540C	OMS1	Q06668	471 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	ECM3	Q99252	613 aa		3.19	□□□□□ -1.9
IRC4	YDR540C	SSB1	P11484	613 aa	Known RBP	3.18	□□□□□ -1.9
IRC4	YDR540C	SEC65	P29478	273 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	EUG1	P32474	517 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	HIR1	P32479	840 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	PET127	P32606	800 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	YPT7	P32939	208 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	NUP60	P39705	539 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	FMP52	P40008	231 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	SSB2	P40150	613 aa	Known RBP	3.18	□□□□□ -1.9
IRC4	YDR540C	YNL195C	P40168	261 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	RSC8	P43609	557 aa	Known RBP	3.18	□□□□□ -1.9
IRC4	YDR540C	COX18	P53239	316 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	YHM2	Q04013	314 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	YPS7	Q06325	596 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	THI22	Q06490	572 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	ISA1	Q07821	250 aa	Predicted RBP	3.18	□□□□□ -1.9
IRC4	YDR540C	TMA17	Q12513	150 aa		3.18	□□□□□ -1.9
IRC4	YDR540C	RPS17A	P02407	136 aa	Known RBP	3.17	□□□□□ -1.9
IRC4	YDR540C	RPS21A	P0C0V8	87 aa	Known RBP	3.17	□□□□□ -1.9
IRC4	YDR540C	RPS17B	P14127	136 aa	Known RBP	3.17	□□□□□ -1.9
IRC4	YDR540C	IME1	P21190	360 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	PEX1	P24004	1043 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	SEC6	P32844	805 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	PPS1	P38148	807 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	FAT1	P38225	669 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	YBR071W	P38243	211 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
IRC4	YDR540C	IES1	P43579	692 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	DUG1	P43616	481 aa	Known RBP	3.17	□□□□□ -1.9
IRC4	YDR540C	DAS1	P47005	663 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	NIT2	P47016	307 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	BFA1	P47113	574 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	YJR120W	P47157	116 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	TEL2	P53038	688 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	NOP15	P53927	220 aa	Predicted RBP	3.17	□□□□□ -1.9
IRC4	YDR540C	TIM44	Q01852	431 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	RCR2	Q03446	210 aa	Known RBP	3.17	□□□□□ -1.9
IRC4	YDR540C	YMR210W	Q03649	449 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	VPS36	Q06696	566 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	SGO1	Q08490	590 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	MCH5	Q08777	521 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	ACF2	Q12168	779 aa		3.17	□□□□□ -1.9
IRC4	YDR540C	ERG20	P08524	352 aa	Known RBP	3.16	□□□□□ -1.9
IRC4	YDR540C	FRS1	P15624	595 aa	Known RBP	3.16	□□□□□ -1.9
IRC4	YDR540C	MRC1	P25588	1096 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	MVD1	P32377	396 aa	Known RBP	3.16	□□□□□ -1.9
IRC4	YDR540C	DAL3	P32459	195 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	HIS7	P33734	552 aa	Known RBP	3.16	□□□□□ -1.9
IRC4	YDR540C	GPP2	P40106	250 aa	Known RBP	3.16	□□□□□ -1.9
IRC4	YDR540C	STB4	P50104	949 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	FHN1	P53279	174 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	RIA1	P53893	1110 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	PTA1	Q01329	785 aa	Predicted RBP	3.16	□□□□□ -1.9
IRC4	YDR540C	MUK1	Q02866	612 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	STP4	Q07351	490 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	VHS3	Q08438	674 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	TRE2	Q08693	809 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	YKL033W-A	Q86ZR7	236 aa		3.16	□□□□□ -1.9
IRC4	YDR540C	GLN4	P13188	809 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms