RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W PFK1P16861 987 aaKnown RBP3.92□□□□□ -1.78
SLD5YDR489W DAL3P32459 195 aa3.92□□□□□ -1.78
SLD5YDR489W APN2P38207 520 aa3.92□□□□□ -1.78
SLD5YDR489W LYS9P38999 446 aa3.92□□□□□ -1.78
SLD5YDR489W SNM1P40993 198 aa3.92□□□□□ -1.78
SLD5YDR489W FKH2P41813 862 aa3.92□□□□□ -1.78
SLD5YDR489W UBA2P52488 636 aa3.92□□□□□ -1.78
SLD5YDR489W FOL1P53848 824 aa3.92□□□□□ -1.78
SLD5YDR489W TRE2Q08693 809 aa3.92□□□□□ -1.78
SLD5YDR489W ATG11Q12527 1178 aa3.92□□□□□ -1.78
SLD5YDR489W HRP1Q99383 534 aaKnown RBP3.92□□□□□ -1.78
SLD5YDR489W PYC1P11154 1178 aaKnown RBP3.91□□□□□ -1.78
SLD5YDR489W IME1P21190 360 aa3.91□□□□□ -1.78
SLD5YDR489W ERG6P25087 383 aaKnown RBP3.91□□□□□ -1.78
SLD5YDR489W IMG2P25642 146 aaPredicted RBP3.91□□□□□ -1.78
SLD5YDR489W SER1P33330 395 aaKnown RBP3.91□□□□□ -1.78
SLD5YDR489W YHR202WP38887 602 aa3.91□□□□□ -1.78
SLD5YDR489W HOS4P40480 1083 aa3.91□□□□□ -1.78
SLD5YDR489W IES1P43579 692 aa3.91□□□□□ -1.78
SLD5YDR489W PEX8P53248 589 aa3.91□□□□□ -1.78
SLD5YDR489W YHM2Q04013 314 aa3.91□□□□□ -1.78
SLD5YDR489W AIM39Q08223 395 aa3.91□□□□□ -1.78
SLD5YDR489W LAT1P12695 482 aaKnown RBP3.9□□□□□ -1.79
SLD5YDR489W AEP2P22136 580 aa3.9□□□□□ -1.79
SLD5YDR489W SEC65P29478 273 aa3.9□□□□□ -1.79
SLD5YDR489W EFT1P32324 842 aaKnown RBP3.9□□□□□ -1.79
SLD5YDR489W HEM12P32347 362 aaPredicted RBP3.9□□□□□ -1.79
SLD5YDR489W PLC1P32383 869 aa3.9□□□□□ -1.79
SLD5YDR489W YKU70P32807 602 aa3.9□□□□□ -1.79
SLD5YDR489W GET2P40056 285 aa3.9□□□□□ -1.79
SLD5YDR489W YIR042CP40586 236 aa3.9□□□□□ -1.79
SLD5YDR489W MUP1P50276 574 aa3.9□□□□□ -1.79
SLD5YDR489W YBP2P53169 641 aa3.9□□□□□ -1.79
SLD5YDR489W TGL2P54857 326 aa3.9□□□□□ -1.79
SLD5YDR489W REC102Q02721 264 aa3.9□□□□□ -1.79
SLD5YDR489W YLR407WQ06070 228 aa3.9□□□□□ -1.79
SLD5YDR489W YPS7Q06325 596 aa3.9□□□□□ -1.79
SLD5YDR489W RPS17AP02407 136 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W RPS17BP14127 136 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W CDC26P14724 124 aa3.89□□□□□ -1.79
SLD5YDR489W RNR1P21524 888 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W HRR25P29295 494 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W SEC6P32844 805 aa3.89□□□□□ -1.79
SLD5YDR489W TRZ1P36159 838 aaPredicted RBP3.89□□□□□ -1.79
SLD5YDR489W ELO3P40319 345 aa3.89□□□□□ -1.79
SLD5YDR489W NOP9P47077 666 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W NOP15P53927 220 aaPredicted RBP3.89□□□□□ -1.79
SLD5YDR489W GPD1Q00055 391 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W PTA1Q01329 785 aaPredicted RBP3.89□□□□□ -1.79
SLD5YDR489W RCR2Q03446 210 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W SKY1Q03656 742 aa3.89□□□□□ -1.79
SLD5YDR489W GAD1Q04792 585 aa3.89□□□□□ -1.79
SLD5YDR489W RGC1Q06108 1083 aaKnown RBP3.89□□□□□ -1.79
SLD5YDR489W STP4Q07351 490 aa3.89□□□□□ -1.79
SLD5YDR489W RMP1Q12530 201 aa3.89□□□□□ -1.79
SLD5YDR489W ERG4P25340 473 aa3.88□□□□□ -1.79
SLD5YDR489W PET127P32606 800 aa3.88□□□□□ -1.79
SLD5YDR489W KTR4P38131 464 aa3.88□□□□□ -1.79
SLD5YDR489W AMA1P50082 593 aa3.88□□□□□ -1.79
SLD5YDR489W PEX14P53112 341 aa3.88□□□□□ -1.79
SLD5YDR489W MTL1P53214 551 aa3.88□□□□□ -1.79
SLD5YDR489W YNL034WP53963 612 aa3.88□□□□□ -1.79
SLD5YDR489W YNL018CP53976 612 aa3.88□□□□□ -1.79
SLD5YDR489W VPS36Q06696 566 aa3.88□□□□□ -1.79
SLD5YDR489W YLR040CQ07988 224 aa3.88□□□□□ -1.79
SLD5YDR489W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SLD5YDR489W SIR3P06701 978 aa3.87□□□□□ -1.79
SLD5YDR489W MET3P08536 511 aa3.87□□□□□ -1.79
SLD5YDR489W CAF20P12962 161 aaKnown RBP3.87□□□□□ -1.79
SLD5YDR489W ACO1P19414 778 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SLD5YDR489W ATP12P22135 325 aa3.87□□□□□ -1.79
SLD5YDR489W TFC4P33339 1025 aa3.87□□□□□ -1.79
SLD5YDR489W YKR075CP36155 307 aa3.87□□□□□ -1.79
SLD5YDR489W APT2P36973 181 aa3.87□□□□□ -1.79
SLD5YDR489W BIT2P38346 545 aa3.87□□□□□ -1.79
SLD5YDR489W YNL195CP40168 261 aa3.87□□□□□ -1.79
SLD5YDR489W ATF1P40353 525 aa3.87□□□□□ -1.79
SLD5YDR489W VID28P40547 921 aa3.87□□□□□ -1.79
SLD5YDR489W DLT1Q04216 342 aa3.87□□□□□ -1.79
SLD5YDR489W ADY4Q05955 493 aa3.87□□□□□ -1.79
SLD5YDR489W THI22Q06490 572 aa3.87□□□□□ -1.79
SLD5YDR489W YPR027CQ12079 277 aa3.87□□□□□ -1.79
SLD5YDR489W GLN4P13188 809 aaKnown RBP3.86□□□□□ -1.79
SLD5YDR489W FRS1P15624 595 aaKnown RBP3.86□□□□□ -1.79
SLD5YDR489W PEX1P24004 1043 aa3.86□□□□□ -1.79
SLD5YDR489W MF(ALPHA)2P32435 120 aa3.86□□□□□ -1.79
SLD5YDR489W BCD1P38772 366 aa3.86□□□□□ -1.79
SLD5YDR489W FMO1P38866 432 aa3.86□□□□□ -1.79
SLD5YDR489W CCT3P39077 534 aaKnown RBP3.86□□□□□ -1.79
SLD5YDR489W BUD8P41698 603 aa3.86□□□□□ -1.79
SLD5YDR489W RSC8P43609 557 aaKnown RBP3.86□□□□□ -1.79
SLD5YDR489W ATG36P46983 293 aa3.86□□□□□ -1.79
SLD5YDR489W BIT61P47041 543 aa3.86□□□□□ -1.79
SLD5YDR489W YMR210WQ03649 449 aa3.86□□□□□ -1.79
SLD5YDR489W ISA1Q07821 250 aaPredicted RBP3.86□□□□□ -1.79
SLD5YDR489W VHS3Q08438 674 aa3.86□□□□□ -1.79
SLD5YDR489W FRE5Q08908 694 aa3.86□□□□□ -1.79
SLD5YDR489W ECM3Q99252 613 aa3.86□□□□□ -1.79
SLD5YDR489W COX11P19516 300 aaKnown RBP3.85□□□□□ -1.79
SLD5YDR489W HXT4P32467 576 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms