RNA–Protein interactions for RNA: YDR371W

CTS2, Transcript of Putative chitinase, yeast

Gene CTS2, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTS2	YDR371W	RTA1	P53047	317 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	YNL050C	P53952	270 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	EAR1	Q03212	550 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	PHO92	Q06390	306 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	TAH18	Q12181	623 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	SSK22	P25390	1331 aa	Predicted RBP	5.8	□□□□□ -1.48
CTS2	YDR371W	HXK1	P04806	485 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	PRP5	P21372	849 aa	Predicted RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	SSE1	P32589	693 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	TEF4	P36008	412 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	CIC1	P38779	376 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	VPS45	P38932	577 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	FAA3	P39002	694 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	YER156C	P40093	338 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	SBE2	P42223	864 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	IRC6	P43615	237 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	CIT3	P43635	486 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	AIP1	P46680	615 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	TAF8	Q03750	510 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	ARA2	Q04212	335 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	EIS1	Q05050	843 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	GIC2	Q06648	383 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	FMP25	Q08023	583 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	YOR296W	Q08748	1289 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	SEC3	P33332	1336 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	SEC23	P15303	768 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	PRP28	P23394	588 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	CMK1	P27466	446 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	FUN30	P31380	1131 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	KNS1	P32350	737 aa	Predicted RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	PAH1	P32567	862 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	PPQ1	P32945	549 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	DUT1	P33317	147 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	SPC29	P33419	253 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	RDH54	P38086	958 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	GIP1	P38229	639 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	RIM11	P38615	370 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	ALD5	P40047	520 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	YJL070C	P40361	888 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	ERR3	P42222	437 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	CCT7	P42943	550 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	SUT1	P53032	299 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	GIM3	P53900	129 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	ERV25	P54837	211 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	ADA2	Q02336	434 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	RPN7	Q06103	429 aa	Known RBP	5.79	□□□□□ -1.48
CTS2	YDR371W	BRE4	Q07660	1125 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	YOR352W	Q08816	343 aa		5.79	□□□□□ -1.48
CTS2	YDR371W	SSM4	P40318	1319 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	NUP192	P47054	1683 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	TRP2	P00899	507 aa	Known RBP	5.78	□□□□□ -1.48
CTS2	YDR371W	CTT1	P06115	562 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	ILS1	P09436	1072 aa	Known RBP	5.78	□□□□□ -1.48
CTS2	YDR371W	KSS1	P14681	368 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	PUT4	P15380	627 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	PDX1	P16451	410 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	AAC3	P18238	307 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	AEP2	P22136	580 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	MSN1	P22148	382 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
CTS2	YDR371W	SEC21	P32074	935 aa	Known RBP	5.78	□□□□□ -1.48
CTS2	YDR371W	SFA1	P32771	386 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	BYE1	P36106	594 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	PSY4	P38193	441 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	YLF2	P38746	405 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	SMC2	P38989	1170 aa	Known RBP	5.78	□□□□□ -1.48
CTS2	YDR371W	NOP16	P40007	231 aa	Known RBP	5.78	□□□□□ -1.48
CTS2	YDR371W	KHA1	P40309	873 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	PRK1	P40494	810 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	SKP2	P42843	763 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	MRPS18	P42847	217 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	EPL1	P43572	832 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	POL31	P46957	487 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	TOS4	Q06266	489 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	EAF1	Q06337	982 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	YLR001C	Q07895	862 aa		5.78	□□□□□ -1.48
CTS2	YDR371W	OM45	P16547	393 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	RPB10	P22139	70 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	RPC82	P32349	654 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	NPL6	P32832	435 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	VPS17	P32913	551 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	MDL1	P33310	695 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	KTR2	P33550	425 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	SEG2	P34250	1132 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	DED81	P38707	554 aa	Known RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	TPA1	P40032	644 aa	Known RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	LSB3	P43603	459 aa	Known RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	VPS53	P47061	822 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	YGR153W	P48238	217 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	UPF3	P48412	387 aa	Known RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	TRF5	P48561	642 aa	Known RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	YAP1802	P53309	568 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	VPS9	P54787	451 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	TIM10	P87108	93 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	CDC55	Q00362	526 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	MTQ2	Q03920	221 aa	Predicted RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	DPB4	Q04603	196 aa	Known RBP	5.77	□□□□□ -1.49
CTS2	YDR371W	NFI1	Q12216	726 aa		5.77	□□□□□ -1.49
CTS2	YDR371W	PRE9	P23638	258 aa	Known RBP	5.76	□□□□□ -1.49
CTS2	YDR371W	NIP1	P32497	812 aa	Known RBP	5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms