RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeast

Gene HTB1, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB1	YDR224C	TGL5	Q12043	749 aa		4.76	□□□□□ -1.65
HTB1	YDR224C	SPO11	P23179	398 aa		4.75	□□□□□ -1.65
HTB1	YDR224C	PCL10	P53124	433 aa		4.75	□□□□□ -1.65
HTB1	YDR224C	APM1	Q00776	475 aa	Predicted RBP	4.75	□□□□□ -1.65
HTB1	YDR224C	GAD1	Q04792	585 aa		4.75	□□□□□ -1.65
HTB1	YDR224C	THI7	Q05998	598 aa		4.75	□□□□□ -1.65
HTB1	YDR224C	YAP7	Q08182	245 aa		4.75	□□□□□ -1.65
HTB1	YDR224C	ICT1	Q12385	394 aa		4.75	□□□□□ -1.65
HTB1	YDR224C	CCR4	P31384	837 aa	Known RBP	4.74	□□□□□ -1.65
HTB1	YDR224C	BCD1	P38772	366 aa		4.74	□□□□□ -1.65
HTB1	YDR224C	YJL206C	P39529	758 aa		4.74	□□□□□ -1.65
HTB1	YDR224C	ATG11	Q12527	1178 aa		4.74	□□□□□ -1.65
HTB1	YDR224C	ADE2	P21264	571 aa	Known RBP	4.73	□□□□□ -1.65
HTB1	YDR224C	MNN4	P36044	1178 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	APT2	P36973	181 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	ECM1	P39715	212 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	MGS1	P40151	587 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	YJR142W	P47173	342 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	YAP1802	P53309	568 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	TEX1	P53851	422 aa	Known RBP	4.73	□□□□□ -1.65
HTB1	YDR224C	DOS2	P54858	310 aa		4.73	□□□□□ -1.65
HTB1	YDR224C	SMX3	P54999	86 aa	Predicted RBP	4.73	□□□□□ -1.65
HTB1	YDR224C	APL2	P36000	726 aa	Predicted RBP	4.72	□□□□□ -1.65
HTB1	YDR224C	TRZ1	P36159	838 aa	Predicted RBP	4.72	□□□□□ -1.65
HTB1	YDR224C	CRP1	P38845	465 aa	Known RBP	4.72	□□□□□ -1.65
HTB1	YDR224C	REV7	P38927	245 aa		4.72	□□□□□ -1.65
HTB1	YDR224C	UBC11	P52492	156 aa		4.72	□□□□□ -1.65
HTB1	YDR224C	ARG5,6	Q01217	863 aa		4.72	□□□□□ -1.65
HTB1	YDR224C	CTK1	Q03957	528 aa	Known RBP	4.72	□□□□□ -1.65
HTB1	YDR224C	THI73	Q07904	523 aa		4.72	□□□□□ -1.65
HTB1	YDR224C	YHR112C	P38716	378 aa		4.71	□□□□□ -1.66
HTB1	YDR224C	HOS4	P40480	1083 aa		4.71	□□□□□ -1.66
HTB1	YDR224C	YNR029C	P53729	429 aa	Known RBP	4.71	□□□□□ -1.66
HTB1	YDR224C	GPD1	Q00055	391 aa	Known RBP	4.71	□□□□□ -1.66
HTB1	YDR224C	REC102	Q02721	264 aa		4.71	□□□□□ -1.66
HTB1	YDR224C	MCM21	Q06675	368 aa		4.71	□□□□□ -1.66
HTB1	YDR224C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
HTB1	YDR224C	TYS1	P36421	394 aa	Known RBP	4.7	□□□□□ -1.66
HTB1	YDR224C	BFA1	P47113	574 aa		4.7	□□□□□ -1.66
HTB1	YDR224C	PMT3	P47190	753 aa		4.7	□□□□□ -1.66
HTB1	YDR224C	GLO1	P50107	326 aa		4.7	□□□□□ -1.66
HTB1	YDR224C	ARP4	P80428	489 aa		4.7	□□□□□ -1.66
HTB1	YDR224C	SEC5	P89102	971 aa		4.7	□□□□□ -1.66
HTB1	YDR224C	RPN13	O13563	156 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	TMT1	P32643	299 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	YKR075C	P36155	307 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	APN2	P38207	520 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	CKB2	P38930	258 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	SET2	P46995	733 aa	Known RBP	4.69	□□□□□ -1.66
HTB1	YDR224C	COX18	P53239	316 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	TAF3	Q12297	353 aa		4.69	□□□□□ -1.66
HTB1	YDR224C	HIR1	P32479	840 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	PRP19	P32523	503 aa	Known RBP	4.68	□□□□□ -1.66
HTB1	YDR224C	MAL31	P38156	614 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	TDA3	P38758	523 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	SSZ1	P38788	538 aa	Known RBP	4.68	□□□□□ -1.66
HTB1	YDR224C	NDC80	P40460	691 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	BAP3	P41815	604 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	YJR096W	P47137	282 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	MTL1	P53214	551 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	BRE5	P53741	515 aa	Known RBP	4.68	□□□□□ -1.66
HTB1	YDR224C	LEE1	Q02799	301 aa	Known RBP	4.68	□□□□□ -1.66
HTB1	YDR224C	UME1	Q03010	460 aa		4.68	□□□□□ -1.66
HTB1	YDR224C	RNR1	P21524	888 aa	Known RBP	4.67	□□□□□ -1.66
HTB1	YDR224C	ORC2	P32833	620 aa		4.67	□□□□□ -1.66
HTB1	YDR224C	YHR202W	P38887	602 aa		4.67	□□□□□ -1.66
HTB1	YDR224C	CCT3	P39077	534 aa	Known RBP	4.67	□□□□□ -1.66
HTB1	YDR224C	YEL020C	P39994	560 aa		4.67	□□□□□ -1.66
HTB1	YDR224C	CCT7	P42943	550 aa	Known RBP	4.67	□□□□□ -1.66
HTB1	YDR224C	YJR039W	P47107	1121 aa		4.67	□□□□□ -1.66
HTB1	YDR224C	DCS2	Q12123	353 aa		4.67	□□□□□ -1.66
HTB1	YDR224C	NUP145	P49687	1317 aa		4.67	□□□□□ -1.66
HTB1	YDR224C	PYC1	P11154	1178 aa	Known RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	ERG6	P25087	383 aa	Known RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	GLG1	P36143	616 aa		4.66	□□□□□ -1.66
HTB1	YDR224C	AKL1	P38080	1108 aa	Known RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	GID8	P40208	455 aa		4.66	□□□□□ -1.66
HTB1	YDR224C	RET2	P43621	546 aa		4.66	□□□□□ -1.66
HTB1	YDR224C	YGR237C	P50089	785 aa		4.66	□□□□□ -1.66
HTB1	YDR224C	YGL081W	P53156	320 aa		4.66	□□□□□ -1.66
HTB1	YDR224C	MTQ2	Q03920	221 aa	Predicted RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	MRI1	Q06489	411 aa	Known RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	ISA1	Q07821	250 aa	Predicted RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	DIA2	Q08496	732 aa	Predicted RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	HRP1	Q99383	534 aa	Known RBP	4.66	□□□□□ -1.66
HTB1	YDR224C	MVD1	P32377	396 aa	Known RBP	4.65	□□□□□ -1.67
HTB1	YDR224C	EMP70	P32802	667 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	FMO1	P38866	432 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	LYS9	P38999	446 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	NUP60	P39705	539 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	ARG2	P40360	574 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	CTR1	P49573	406 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	HFD1	Q04458	532 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	FAP7	Q12055	197 aa	Predicted RBP	4.65	□□□□□ -1.67
HTB1	YDR224C	YKL033W-A	Q86ZR7	236 aa		4.65	□□□□□ -1.67
HTB1	YDR224C	BDH2	P39713	417 aa		4.64	□□□□□ -1.67
HTB1	YDR224C	NUG1	P40010	520 aa	Known RBP	4.64	□□□□□ -1.67
HTB1	YDR224C	YGR153W	P48238	217 aa		4.64	□□□□□ -1.67
HTB1	YDR224C	YTM1	Q12024	460 aa	Predicted RBP	4.64	□□□□□ -1.67
HTB1	YDR224C	SIR3	P06701	978 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms