RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C TY1A-DR4O74302 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-HP0C2I4 478 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C TY1A-AP0CX57 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-PR1P0CX58 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-ORP0CX59 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-PR2P0CX60 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-DR5P0CX65 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-ER2P0CX66 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-GR3P0CX67 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-LR1P0CX68 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-MR2P0CX69 440 aa4.28□□□□□ -1.72
PTA1YAL043C KEX2P13134 814 aa4.28□□□□□ -1.72
PTA1YAL043C KIN1P13185 1064 aa4.28□□□□□ -1.72
PTA1YAL043C PWP1P21304 576 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C AMS1P22855 1083 aa4.28□□□□□ -1.72
PTA1YAL043C SRO9P25567 434 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C SPT5P27692 1063 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C YME2P32843 850 aa4.28□□□□□ -1.72
PTA1YAL043C SQT1P35184 431 aa4.28□□□□□ -1.72
PTA1YAL043C SPC42P36094 363 aa4.28□□□□□ -1.72
PTA1YAL043C RCK2P38623 610 aa4.28□□□□□ -1.72
PTA1YAL043C TDA3P38758 523 aa4.28□□□□□ -1.72
PTA1YAL043C PSY2P40164 858 aa4.28□□□□□ -1.72
PTA1YAL043C NUP82P40368 713 aa4.28□□□□□ -1.72
PTA1YAL043C AIM20P40451 204 aa4.28□□□□□ -1.72
PTA1YAL043C EMW1P42842 904 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C TDA10P42938 290 aa4.28□□□□□ -1.72
PTA1YAL043C VPS53P47061 822 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-JR2P47099 440 aa4.28□□□□□ -1.72
PTA1YAL043C YJR039WP47107 1121 aa4.28□□□□□ -1.72
PTA1YAL043C TAM41P53230 385 aa4.28□□□□□ -1.72
PTA1YAL043C TEP1P53916 434 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-DR1Q03856 440 aa4.28□□□□□ -1.72
PTA1YAL043C UFO1Q04511 668 aa4.28□□□□□ -1.72
PTA1YAL043C TMA64Q04600 565 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C TY1A-ML1Q04706 440 aaKnown RBP4.28□□□□□ -1.72
PTA1YAL043C TY1A-BRQ12217 440 aa4.28□□□□□ -1.72
PTA1YAL043C YLL054CQ12244 843 aa4.28□□□□□ -1.72
PTA1YAL043C NCA2Q12374 616 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-NL2Q12470 440 aa4.28□□□□□ -1.72
PTA1YAL043C TY1A-GR2Q12485 440 aa4.28□□□□□ -1.72
PTA1YAL043C THS1P04801 734 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C RAD3P06839 778 aa4.27□□□□□ -1.73
PTA1YAL043C ERG12P07277 443 aa4.27□□□□□ -1.73
PTA1YAL043C SEC2P17065 759 aa4.27□□□□□ -1.73
PTA1YAL043C RRT12P25381 491 aa4.27□□□□□ -1.73
PTA1YAL043C TFC4P33339 1025 aa4.27□□□□□ -1.73
PTA1YAL043C YBL055CP34220 418 aaPredicted RBP4.27□□□□□ -1.73
PTA1YAL043C PIM1P36775 1133 aa4.27□□□□□ -1.73
PTA1YAL043C ACA1P39970 489 aa4.27□□□□□ -1.73
PTA1YAL043C KHA1P40309 873 aa4.27□□□□□ -1.73
PTA1YAL043C SAD1P43589 448 aa4.27□□□□□ -1.73
PTA1YAL043C TMA22P47089 198 aaPredicted RBP4.27□□□□□ -1.73
PTA1YAL043C YML6P51998 286 aa4.27□□□□□ -1.73
PTA1YAL043C DRN1P53255 507 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C SQS1P53866 767 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C ELP3Q02908 557 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C GPI13Q07830 1017 aa4.27□□□□□ -1.73
PTA1YAL043C TIF1P10081 395 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C RAD18P10862 487 aa4.27□□□□□ -1.73
PTA1YAL043C SDH2P21801 266 aa4.27□□□□□ -1.73
PTA1YAL043C MEF1P25039 761 aa4.27□□□□□ -1.73
PTA1YAL043C YCR051WP25631 222 aa4.27□□□□□ -1.73
PTA1YAL043C SUV3P32580 737 aa4.27□□□□□ -1.73
PTA1YAL043C SEG2P34250 1132 aa4.27□□□□□ -1.73
PTA1YAL043C SAK1P38990 1142 aa4.27□□□□□ -1.73
PTA1YAL043C YMR134WP40207 237 aa4.27□□□□□ -1.73
PTA1YAL043C ASG1P40467 964 aa4.27□□□□□ -1.73
PTA1YAL043C HXT8P40886 569 aa4.27□□□□□ -1.73
PTA1YAL043C GPD2P41911 440 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C CPR7P47103 393 aa4.27□□□□□ -1.73
PTA1YAL043C TAN1P53072 289 aaPredicted RBP4.27□□□□□ -1.73
PTA1YAL043C LIF1P53150 421 aa4.27□□□□□ -1.73
PTA1YAL043C ATF2P53296 535 aa4.27□□□□□ -1.73
PTA1YAL043C PTA1Q01329 785 aaPredicted RBP4.27□□□□□ -1.73
PTA1YAL043C LGE1Q02796 332 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C RNY1Q02933 434 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C SPO19Q03029 223 aa4.27□□□□□ -1.73
PTA1YAL043C YML037CQ03703 340 aa4.27□□□□□ -1.73
PTA1YAL043C NOB1Q08444 459 aaKnown RBP4.27□□□□□ -1.73
PTA1YAL043C GNT1Q12096 491 aa4.27□□□□□ -1.73
PTA1YAL043C TY4A-HQ6Q5P6 413 aa4.27□□□□□ -1.73
PTA1YAL043C MYO1P08964 1928 aa4.27□□□□□ -1.73
PTA1YAL043C RAD10P06838 210 aa4.26□□□□□ -1.73
PTA1YAL043C ADH4P10127 382 aa4.26□□□□□ -1.73
PTA1YAL043C RPL4AP10664 362 aaKnown RBP4.26□□□□□ -1.73
PTA1YAL043C PHO8P11491 566 aa4.26□□□□□ -1.73
PTA1YAL043C AEP2P22136 580 aa4.26□□□□□ -1.73
PTA1YAL043C RPA135P22138 1203 aaKnown RBP4.26□□□□□ -1.73
PTA1YAL043C SSA4P22202 642 aaKnown RBP4.26□□□□□ -1.73
PTA1YAL043C PAT1P25644 796 aaKnown RBP4.26□□□□□ -1.73
PTA1YAL043C YSC84P32793 468 aa4.26□□□□□ -1.73
PTA1YAL043C RPC37P36121 282 aa4.26□□□□□ -1.73
PTA1YAL043C HSM3P38348 480 aa4.26□□□□□ -1.73
PTA1YAL043C DSE1P40077 573 aa4.26□□□□□ -1.73
PTA1YAL043C ASG7P46993 209 aa4.26□□□□□ -1.73
PTA1YAL043C ACF4P47129 309 aa4.26□□□□□ -1.73
PTA1YAL043C RPL4BP49626 362 aaKnown RBP4.26□□□□□ -1.73
PTA1YAL043C UBP15P50101 1230 aa4.26□□□□□ -1.73
PTA1YAL043C ORC5P50874 479 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms