RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MRPL18Q9H0U6 180 aaKnown RBP6.21□□□□□ -1.42
SRP54-214ENST00000630962 DNAJC25Q9H1X3 360 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 RASSF4Q9H2L5 321 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 ZFYVE28Q9HCC9 887 aa6.21□□□□□ -1.42
SRP54-214ENST00000630962 PDE2AO00408 941 aaPredicted RBP6.2□□□□□ -1.42
SRP54-214ENST00000630962 CYP2E1P05181 493 aaPredicted RBP6.2□□□□□ -1.42
SRP54-214ENST00000630962 BAG6P46379 1132 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 ADGRE1Q14246 886 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 GRIK4Q16099 956 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 COL13A1Q5TAT6 717 aaPredicted RBP6.2□□□□□ -1.42
SRP54-214ENST00000630962 TXNRD3Q86VQ6 643 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 ALKBH8Q96BT7 664 aaKnown RBP6.2□□□□□ -1.42
SRP54-214ENST00000630962 CHRDQ9H2X0 955 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 KANSL3Q9P2N6 904 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 BIN2Q9UBW5 565 aaPredicted RBP6.2□□□□□ -1.42
SRP54-214ENST00000630962 DCTN4Q9UJW0 460 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 TRIM33Q9UPN9 1127 aa6.2□□□□□ -1.42
SRP54-214ENST00000630962 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 DLL1O00548 723 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 CPNE3O75131 537 aaKnown RBP6.19□□□□□ -1.42
SRP54-214ENST00000630962 PIP4K2BP78356 416 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 ATP11AP98196 1134 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 ECM1Q16610 540 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 TMEM130Q8N3G9 435 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 OSMRQ99650 979 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 OSGEPQ9NPF4 335 aa6.19□□□□□ -1.42
SRP54-214ENST00000630962 A6NHS1 94 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 H3BRJ5 948 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 EREGO14944 169 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 ITGB2P05107 769 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 PDIA4P13667 645 aaKnown RBP6.18□□□□□ -1.42
SRP54-214ENST00000630962 SELPP16109 830 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 MBTPS1Q14703 1052 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 ZSCAN29Q8IWY8 852 aaPredicted RBP6.18□□□□□ -1.42
SRP54-214ENST00000630962 BSNDQ8WZ55 320 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 POP1Q99575 1024 aaKnown RBP6.18□□□□□ -1.42
SRP54-214ENST00000630962 ZFYVE1Q9HBF4 777 aa6.18□□□□□ -1.42
SRP54-214ENST00000630962 SETDB1Q15047 1291 aa6.17□□□□□ -1.42
SRP54-214ENST00000630962 GALNT12Q8IXK2 581 aa6.17□□□□□ -1.42
SRP54-214ENST00000630962 DDX54Q8TDD1 881 aaKnown RBP6.17□□□□□ -1.42
SRP54-214ENST00000630962 NXPE3Q969Y0 559 aa6.17□□□□□ -1.42
SRP54-214ENST00000630962 BHLHE41Q9C0J9 482 aaPredicted RBP6.17□□□□□ -1.42
SRP54-214ENST00000630962 LACRTQ9GZZ8 138 aa6.17□□□□□ -1.42
SRP54-214ENST00000630962 SEC31BQ9NQW1 1179 aa6.17□□□□□ -1.42
SRP54-214ENST00000630962 PPP4R2Q9NY27 417 aa6.17□□□□□ -1.42
SRP54-214ENST00000630962 FOXD3Q9UJU5 478 aaPredicted RBP6.17□□□□□ -1.42
SRP54-214ENST00000630962 LINC01387J3KSC0 135 aa6.16□□□□□ -1.42
SRP54-214ENST00000630962 NFKBIEO00221 500 aa6.16□□□□□ -1.42
SRP54-214ENST00000630962 FSCN2O14926 492 aa6.16□□□□□ -1.42
SRP54-214ENST00000630962 CD68P34810 354 aaPredicted RBP6.16□□□□□ -1.42
SRP54-214ENST00000630962 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
SRP54-214ENST00000630962 ZKSCAN3Q9BRR0 538 aa6.16□□□□□ -1.42
SRP54-214ENST00000630962 SOX17Q9H6I2 414 aaPredicted RBP6.16□□□□□ -1.42
SRP54-214ENST00000630962 K7ELQ4 463 aaPredicted RBP6.15□□□□□ -1.42
SRP54-214ENST00000630962 DEAF1O75398 565 aaPredicted RBP6.15□□□□□ -1.42
SRP54-214ENST00000630962 FGD1P98174 961 aa6.15□□□□□ -1.42
SRP54-214ENST00000630962 HNRNPUQ00839 825 aaKnown RBP eCLIP6.15□□□□□ -1.42
SRP54-214ENST00000630962 HP1BP3Q5SSJ5 553 aaPredicted RBP6.15□□□□□ -1.42
SRP54-214ENST00000630962 KIAA0319Q5VV43 1072 aa6.15□□□□□ -1.42
SRP54-214ENST00000630962 CEP41Q9BYV8 373 aa6.15□□□□□ -1.42
SRP54-214ENST00000630962 AKTIPQ9H8T0 292 aa6.15□□□□□ -1.42
SRP54-214ENST00000630962 TRAK1Q9UPV9 953 aa6.15□□□□□ -1.42
SRP54-214ENST00000630962 H2AFB1P0C5Y9 115 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 H2AFB2P0C5Z0 115 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 MAPK1P28482 360 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 IKBKEQ14164 716 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 SHISA2Q6UWI4 295 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 SLC51AQ86UW1 340 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 WFDC12Q8WWY7 111 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 SOX13Q9UN79 622 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 IVNS1ABPQ9Y6Y0 642 aa6.14□□□□□ -1.43
SRP54-214ENST00000630962 EPHA1P21709 976 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 PLCB3Q01970 1234 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 PTPN12Q05209 780 aaKnown RBP6.13□□□□□ -1.43
SRP54-214ENST00000630962 C19orf57Q0VDD7 668 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 CCNJLQ8IV13 435 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 CSRNP1Q96S65 589 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 NIF3L1Q9GZT8 377 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 LIN7BQ9HAP6 207 aa6.13□□□□□ -1.43
SRP54-214ENST00000630962 F8W735 103 aaPredicted RBP6.12□□□□□ -1.43
SRP54-214ENST00000630962 EIF1AYO14602 144 aaKnown RBP6.12□□□□□ -1.43
SRP54-214ENST00000630962 ADAM23O75077 832 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 DOC2BQ14184 412 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 DUOXA2Q1HG44 320 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 UVSSAQ2YD98 709 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 PEAR1Q5VY43 1037 aaPredicted RBP6.12□□□□□ -1.43
SRP54-214ENST00000630962 ASAP3Q8TDY4 903 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 EHD4Q9H223 541 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 SH2B1Q9NRF2 756 aaPredicted RBP6.12□□□□□ -1.43
SRP54-214ENST00000630962 NLRP2Q9NX02 1062 aa6.12□□□□□ -1.43
SRP54-214ENST00000630962 A0A096LPE4 126 aa6.11□□□□□ -1.43
SRP54-214ENST00000630962 A0A1W2PP55 124 aa6.11□□□□□ -1.43
SRP54-214ENST00000630962 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
SRP54-214ENST00000630962 GPR182O15218 404 aa6.11□□□□□ -1.43
SRP54-214ENST00000630962 XRCC5P13010 732 aaKnown RBP6.11□□□□□ -1.43
SRP54-214ENST00000630962 IREB2P48200 963 aaKnown RBP6.11□□□□□ -1.43
SRP54-214ENST00000630962 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.11□□□□□ -1.43
SRP54-214ENST00000630962 TMC7Q7Z402 723 aa6.11□□□□□ -1.43
SRP54-214ENST00000630962 FBF1Q8TES7 1133 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms