RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 KIF5AQ12840 1032 aa19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 Q6ZUG5 572 aa19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 B4DLN1 442 aa19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 MRPL12P52815 198 aaKnown RBP19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 NBPF11Q86T75 865 aa19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 FANCAO15360 1455 aa19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 FBXO31Q5XUX0 539 aaPredicted RBP19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 CCDC121Q6ZUS5 278 aa19.75■□□□□ 0.75
HMGXB3-206ENST00000613459 SYT1P21579 422 aa19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 MEIS3Q99687 375 aa19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 DACT1Q9NYF0 836 aa19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 DUOX2Q9NRD8 1548 aa19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 ISM2Q6H9L7 571 aa19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 ZNF830Q96NB3 372 aaPredicted RBP19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 UTP14AQ9BVJ6 771 aaKnown RBP19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 PUF60Q9UHX1 559 aaKnown RBP19.74■□□□□ 0.75
HMGXB3-206ENST00000613459 AOPEPQ8N6M6 819 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 TSGA10Q9BZW7 698 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 SSX2IPQ9Y2D8 614 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 ASIC1P78348 528 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 TUBB2AQ13885 445 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 NECAB1Q8N987 351 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 DRC1Q96MC2 740 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 TUBB2BQ9BVA1 445 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 HDAC9Q9UKV0 1011 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 RAB3GAP1Q15042 981 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 LINS1Q8NG48 757 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 CFAP57Q96MR6 1250 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 IMPG2Q9BZV3 1241 aa19.73■□□□□ 0.75
HMGXB3-206ENST00000613459 NAA16Q6N069 864 aaPredicted RBP19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 MSANTD4Q8NCY6 345 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 STX8Q9UNK0 236 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 ATP2C2O75185 946 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 KRT2P35908 639 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 AFMP43652 599 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 TTC31Q49AM3 519 aaPredicted RBP19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 CHPF2Q9P2E5 772 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 PARD3Q8TEW0 1356 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 RNF113AO15541 343 aaKnown RBP19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 CAPN2P17655 700 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 TYRO3Q06418 890 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 KRT79Q5XKE5 535 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 DCTPP1Q9H773 170 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 PAG1Q9NWQ8 432 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 OGFRQ9NZT2 677 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 MCM6Q14566 821 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 SYNCQ9H7C4 482 aa19.72■□□□□ 0.75
HMGXB3-206ENST00000613459 WDR78Q5VTH9 848 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 DAAM2Q86T65 1068 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 NBPF5PQ86XG9 351 aaPredicted RBP19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 MICALL1Q8N3F8 863 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 ATRIPQ8WXE1 791 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 NYXQ9GZU5 481 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 RFC4P35249 363 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 NAPAP54920 295 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 ZNF804AQ7Z570 1209 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 XAGE3Q8WTP9 111 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 TNRQ92752 1358 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 TTLL12Q14166 644 aaPredicted RBP19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 PIK3C2GO75747 1445 aa19.71■□□□□ 0.75
HMGXB3-206ENST00000613459 EBAG9O00559 213 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 CEP128Q6ZU80 1094 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 CCDC42Q96M95 316 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 GNA11P29992 359 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 HEATR3Q7Z4Q2 680 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 KIAA1524Q8TCG1 905 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 JAKMIP2Q96AA8 810 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 RRP36Q96EU6 259 aaKnown RBP19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 ITSN2Q9NZM3 1697 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 FAM83GA6ND36 823 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 ZFP91Q96JP5 570 aaPredicted RBP19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 DNAJC25Q9H1X3 360 aa19.7■□□□□ 0.74
HMGXB3-206ENST00000613459 MXRA7P84157 204 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 CNGA4Q8IV77 575 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 NEK11Q8NG66 645 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 ZCRB1Q8TBF4 217 aaKnown RBP19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 NMIQ13287 307 aaPredicted RBP19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 PCDHB15Q9Y5E8 787 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 V9GYY5 206 aaPredicted RBP19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 MAGEB6P1A0A0J9YX57 407 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 PHACTR2O75167 634 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 TRIM14Q14142 442 aa19.69■□□□□ 0.74
HMGXB3-206ENST00000613459 TNNC1P63316 161 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 DHX32Q7L7V1 743 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 HS2ST1Q7LGA3 356 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 SMARCC2Q8TAQ2 1214 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 OTUD6BQ8N6M0 293 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 NLRP3Q96P20 1036 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 MTRF1LQ9UGC7 380 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 SLC9C2Q5TAH2 1124 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 FLT4P35916 1363 aa19.68■□□□□ 0.74
HMGXB3-206ENST00000613459 DNM1Q05193 864 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms