RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KBTBD3Q8NAB2 608 aa26.09■■□□□ 1.77
SHANK2-220ENST00000608988 FER1L4A9Z1Z3 1794 aa26.09■■□□□ 1.77
SHANK2-220ENST00000608988 NAA30Q147X3 362 aaPredicted RBP26.08■■□□□ 1.77
SHANK2-220ENST00000608988 ARID5BQ14865 1188 aa26.08■■□□□ 1.77
SHANK2-220ENST00000608988 TERF2Q15554 542 aa26.08■■□□□ 1.77
SHANK2-220ENST00000608988 FILIP1Q7Z7B0 1213 aa26.08■■□□□ 1.77
SHANK2-220ENST00000608988 AOPEPQ8N6M6 819 aa26.08■■□□□ 1.77
SHANK2-220ENST00000608988 KCNA6P17658 529 aa26.08■■□□□ 1.77
SHANK2-220ENST00000608988 ME1P48163 572 aa26.08■■□□□ 1.77
SHANK2-220ENST00000608988 ADAMTSL3P82987 1691 aa26.07■■□□□ 1.76
SHANK2-220ENST00000608988 CCDC66A2RUB6 948 aa26.06■■□□□ 1.76
SHANK2-220ENST00000608988 CEBPZQ03701 1054 aaKnown RBP26.06■■□□□ 1.76
SHANK2-220ENST00000608988 PTPN12Q05209 780 aaKnown RBP26.06■■□□□ 1.76
SHANK2-220ENST00000608988 TFCP2Q12800 502 aa26.06■■□□□ 1.76
SHANK2-220ENST00000608988 ZRSR1Q15695 479 aaKnown RBP26.06■■□□□ 1.76
SHANK2-220ENST00000608988 STOX1Q6ZVD7 989 aa26.06■■□□□ 1.76
SHANK2-220ENST00000608988 EDC3Q96F86 508 aaKnown RBP26.06■■□□□ 1.76
SHANK2-220ENST00000608988 AIMP1Q12904 312 aaKnown RBP26.06■■□□□ 1.76
SHANK2-220ENST00000608988 KCNG4Q8TDN1 519 aa26.06■■□□□ 1.76
SHANK2-220ENST00000608988 YEATS4O95619 227 aa26.05■■□□□ 1.76
SHANK2-220ENST00000608988 EPHA10Q5JZY3 1008 aa26.05■■□□□ 1.76
SHANK2-220ENST00000608988 FBXO38Q6PIJ6 1188 aa26.05■■□□□ 1.76
SHANK2-220ENST00000608988 NBPF11Q86T75 865 aa26.05■■□□□ 1.76
SHANK2-220ENST00000608988 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
SHANK2-220ENST00000608988 EVCP57679 992 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 BMS1Q14692 1282 aaKnown RBP26.04■■□□□ 1.76
SHANK2-220ENST00000608988 GPR108Q9NPR9 543 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 KIAA1468Q9P260 1216 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 SPEF2Q9C093 1822 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 C5P01031 1676 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 PRAMEF22A3QJZ6 481 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 CCDC129Q6ZRS4 1044 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 KLHDC4Q8TBB5 520 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 SDF4Q9BRK5 362 aa26.04■■□□□ 1.76
SHANK2-220ENST00000608988 H2AFXP16104 143 aaPredicted RBP26.03■■□□□ 1.76
SHANK2-220ENST00000608988 APOBRQ0VD83 1088 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 ELF2Q15723 593 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 CCDC93Q567U6 631 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 ARHGEF25Q86VW2 580 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 PCDHA7Q9UN72 937 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 ERBB3P21860 1342 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 CARMIL3Q8ND23 1372 aa26.03■■□□□ 1.76
SHANK2-220ENST00000608988 DNAJC2Q99543 621 aaKnown RBP26.02■■□□□ 1.76
SHANK2-220ENST00000608988 MYD88Q99836 296 aa26.02■■□□□ 1.76
SHANK2-220ENST00000608988 TRMT1Q9NXH9 659 aaKnown RBP26.02■■□□□ 1.76
SHANK2-220ENST00000608988 TMEM94Q12767 1356 aa26.02■■□□□ 1.76
SHANK2-220ENST00000608988 SFPQP23246 707 aaKnown RBP eCLIP26.02■■□□□ 1.762e-6■■■□□ 16.7
SHANK2-220ENST00000608988 PDIA3P30101 505 aaKnown RBP26.02■■□□□ 1.76
SHANK2-220ENST00000608988 ILDR1Q86SU0 546 aaPredicted RBP26.02■■□□□ 1.76
SHANK2-220ENST00000608988 XAGE3Q8WTP9 111 aa26.02■■□□□ 1.76
SHANK2-220ENST00000608988 PPP1R13BQ96KQ4 1090 aa26.02■■□□□ 1.76
SHANK2-220ENST00000608988 POLR3EQ9NVU0 708 aa26.02■■□□□ 1.76
SHANK2-220ENST00000608988 NLRP12P59046 1061 aa26.01■■□□□ 1.75
SHANK2-220ENST00000608988 ZMYM1Q5SVZ6 1142 aa26.01■■□□□ 1.75
SHANK2-220ENST00000608988 E4F1Q66K89 784 aaPredicted RBP26.01■■□□□ 1.75
SHANK2-220ENST00000608988 BRAPQ7Z569 592 aa26.01■■□□□ 1.75
SHANK2-220ENST00000608988 DBNDD2Q9BQY9 259 aa26.01■■□□□ 1.75
SHANK2-220ENST00000608988 IKBKBO14920 756 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 MYO1BO43795 1136 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 ZNF790Q6PG37 636 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 LINC00301Q8NCQ3 95 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 SEC62Q99442 399 aaKnown RBP26■■□□□ 1.75
SHANK2-220ENST00000608988 FTOQ9C0B1 505 aaKnown RBP eCLIP26■■□□□ 1.75
SHANK2-220ENST00000608988 PHLPP2Q6ZVD8 1323 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 E7EWF7 191 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 PSME1Q06323 249 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 SRRTQ9BXP5 876 aaKnown RBP26■■□□□ 1.75
SHANK2-220ENST00000608988 LRRC2Q9BYS8 371 aa26■■□□□ 1.75
SHANK2-220ENST00000608988 AFDNP55196 1824 aaKnown RBP26■■□□□ 1.75
SHANK2-220ENST00000608988 PLEKHG2Q9H7P9 1386 aa25.99■■□□□ 1.75
SHANK2-220ENST00000608988 SCN11AQ9UI33 1791 aa25.99■■□□□ 1.75
SHANK2-220ENST00000608988 ANKRD13DQ6ZTN6 518 aa25.99■■□□□ 1.75
SHANK2-220ENST00000608988 ANKRD24Q8TF21 1146 aa25.99■■□□□ 1.75
SHANK2-220ENST00000608988 DHX16O60231 1041 aaKnown RBP25.98■■□□□ 1.75
SHANK2-220ENST00000608988 STK38Q15208 465 aa25.98■■□□□ 1.75
SHANK2-220ENST00000608988 COPS6Q7L5N1 327 aa25.98■■□□□ 1.75
SHANK2-220ENST00000608988 ARMCX5Q6P1M9 558 aa25.98■■□□□ 1.75
SHANK2-220ENST00000608988 DDX46Q7L014 1031 aaKnown RBP25.98■■□□□ 1.75
SHANK2-220ENST00000608988 XPO4Q9C0E2 1151 aaKnown RBP25.98■■□□□ 1.75
SHANK2-220ENST00000608988 PAG1Q9NWQ8 432 aa25.98■■□□□ 1.75
SHANK2-220ENST00000608988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.98■■□□□ 1.753e-6■■□□□ 13.6
SHANK2-220ENST00000608988 TPM1P09493 284 aa25.97■■□□□ 1.75
SHANK2-220ENST00000608988 SF3A1Q15459 793 aaKnown RBP25.97■■□□□ 1.75
SHANK2-220ENST00000608988 TMC6Q7Z403 805 aa25.97■■□□□ 1.75
SHANK2-220ENST00000608988 TIGD1Q96MW7 591 aa25.97■■□□□ 1.75
SHANK2-220ENST00000608988 CBFA2T2O43439 604 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 SMC2O95347 1197 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 SLC3A2P08195 630 aaKnown RBP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 NDUFA8P51970 172 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 CCT2P78371 535 aaKnown RBP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 FCHSD1Q86WN1 690 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 IFNKQ9P0W0 207 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 SETD1BQ9UPS6 1966 aaKnown RBP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 IGSF3O75054 1194 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 CEBPAP49715 358 aaPredicted RBP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 LRRFIP1Q32MZ4 808 aaKnown RBP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 SLC52A2Q9HAB3 445 aa25.96■■□□□ 1.75
SHANK2-220ENST00000608988 ARGLU1Q9NWB6 273 aaPredicted RBP25.96■■□□□ 1.75
SHANK2-220ENST00000608988 SPTLC2O15270 562 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms