RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 DACT2Q5SW24 774 aa17.94■□□□□ 0.46
SHKBP1-208ENST00000595726 PODNQ7Z5L7 613 aa17.94■□□□□ 0.46
SHKBP1-208ENST00000595726 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
SHKBP1-208ENST00000595726 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
SHKBP1-208ENST00000595726 COL6A3P12111 3177 aa17.93■□□□□ 0.46
SHKBP1-208ENST00000595726 OGFOD1Q8N543 542 aa17.93■□□□□ 0.46
SHKBP1-208ENST00000595726 CLMNQ96JQ2 1002 aa17.93■□□□□ 0.46
SHKBP1-208ENST00000595726 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
SHKBP1-208ENST00000595726 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-208ENST00000595726 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-208ENST00000595726 HDGFL1Q5TGJ6 251 aa17.92■□□□□ 0.46
SHKBP1-208ENST00000595726 ARMC5Q96C12 935 aa17.92■□□□□ 0.46
SHKBP1-208ENST00000595726 LAS1LQ9Y4W2 734 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-208ENST00000595726 XDHP47989 1333 aa17.92■□□□□ 0.46
SHKBP1-208ENST00000595726 ATP2B4P23634 1241 aa17.91■□□□□ 0.46
SHKBP1-208ENST00000595726 INHBEP58166 350 aa17.91■□□□□ 0.46
SHKBP1-208ENST00000595726 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-208ENST00000595726 EFCC1Q9HA90 598 aa17.91■□□□□ 0.46
SHKBP1-208ENST00000595726 H0YGN5 161 aa17.9■□□□□ 0.46
SHKBP1-208ENST00000595726 CRHR2Q13324 411 aa17.9■□□□□ 0.46
SHKBP1-208ENST00000595726 ERO1AQ96HE7 468 aa17.9■□□□□ 0.46
SHKBP1-208ENST00000595726 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-208ENST00000595726 PSME4Q14997 1843 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 CHL1O00533 1208 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 MYCP01106 439 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 TMPOP42166 694 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 CCDC152Q4G0S7 254 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 TXNRD3Q86VQ6 643 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 OTUD5Q96G74 571 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 WNK4Q96J92 1243 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 TMEM106CQ9BVX2 250 aa17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 DBF4Q9UBU7 674 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-208ENST00000595726 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
SHKBP1-208ENST00000595726 RIC3Q7Z5B4 369 aa17.88■□□□□ 0.45
SHKBP1-208ENST00000595726 KIAA0825Q8IV33 1275 aa17.88■□□□□ 0.45
SHKBP1-208ENST00000595726 DEFB129Q9H1M3 183 aa17.88■□□□□ 0.45
SHKBP1-208ENST00000595726 DLL1O00548 723 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 PDE8AO60658 829 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 GJA5P36382 358 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 SP3Q02447 781 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 STRIP1Q5VSL9 837 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 APOBEC3FQ8IUX4 373 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 ZNF333Q96JL9 665 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 MYD88Q99836 296 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 PTPN18Q99952 460 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 HYPKQ9NX55 129 aa17.87■□□□□ 0.45
SHKBP1-208ENST00000595726 ZBTB48P10074 688 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-208ENST00000595726 ZBED3Q96IU2 234 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-208ENST00000595726 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-208ENST00000595726 MINPP1Q9UNW1 487 aa17.86■□□□□ 0.45
SHKBP1-208ENST00000595726 PCDHAC2Q9Y5I4 1007 aa17.86■□□□□ 0.45
SHKBP1-208ENST00000595726 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-208ENST00000595726 SLC4A8Q2Y0W8 1093 aa17.85■□□□□ 0.45
SHKBP1-208ENST00000595726 TTLL5Q6EMB2 1281 aa17.85■□□□□ 0.45
SHKBP1-208ENST00000595726 CHRDL2Q6WN34 429 aa17.85■□□□□ 0.45
SHKBP1-208ENST00000595726 RBBP6Q7Z6E9 1792 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-208ENST00000595726 MED23Q9ULK4 1368 aa17.85■□□□□ 0.45
SHKBP1-208ENST00000595726 MYO3BQ8WXR4 1341 aa17.84■□□□□ 0.45
SHKBP1-208ENST00000595726 KLRK1P26718 216 aa17.84■□□□□ 0.45
SHKBP1-208ENST00000595726 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-208ENST00000595726 MAP3K11Q16584 847 aa17.84■□□□□ 0.45
SHKBP1-208ENST00000595726 PTCH2Q9Y6C5 1203 aa17.84■□□□□ 0.45
SHKBP1-208ENST00000595726 SSC5DA1L4H1 1573 aa17.83■□□□□ 0.45
SHKBP1-208ENST00000595726 PPP1R12BO60237 982 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 HSP90B1P14625 803 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 GTF2IP78347 998 aa17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 LMOD3Q0VAK6 560 aa17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 SLC9C1Q4G0N8 1177 aa17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 COA1Q9GZY4 146 aa17.83■□□□□ 0.44
SHKBP1-208ENST00000595726 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 NBPF12Q5TAG4 269 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 OTUD7BQ6GQQ9 843 aa17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 ZNF646O15015 1829 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-208ENST00000595726 CUL9Q8IWT3 2517 aa17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 CLRN2A0PK11 232 aa17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 USP2O75604 605 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 DLGAP5Q15398 846 aa17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 GREM2Q9H772 168 aa17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 BSDC1Q9NW68 430 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 TRIM35Q9UPQ4 493 aa17.81■□□□□ 0.44
SHKBP1-208ENST00000595726 AOX1Q06278 1338 aa17.8■□□□□ 0.44
SHKBP1-208ENST00000595726 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
SHKBP1-208ENST00000595726 HOXB7P09629 217 aa17.8■□□□□ 0.44
SHKBP1-208ENST00000595726 NBPF11Q86T75 865 aa17.8■□□□□ 0.44
SHKBP1-208ENST00000595726 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
SHKBP1-208ENST00000595726 CDC5LQ99459 802 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-208ENST00000595726 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-208ENST00000595726 CTSWP56202 376 aa17.79■□□□□ 0.44
SHKBP1-208ENST00000595726 CERS5Q8N5B7 392 aa17.79■□□□□ 0.44
SHKBP1-208ENST00000595726 TTLL11Q8NHH1 800 aa17.79■□□□□ 0.44
SHKBP1-208ENST00000595726 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-208ENST00000595726 MMP14P50281 582 aa17.78■□□□□ 0.44
SHKBP1-208ENST00000595726 SUPT20HL1Q3ZLR7 823 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms