RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SREBF2Q12772 1141 aa22.44■■□□□ 1.18
RETREG3-210ENST00000590541 RUNDC1Q96C34 613 aa22.44■■□□□ 1.18
RETREG3-210ENST00000590541 MBIPQ9NS73 344 aa22.44■■□□□ 1.18
RETREG3-210ENST00000590541 MED23Q9ULK4 1368 aa22.44■■□□□ 1.18
RETREG3-210ENST00000590541 MYBBP1AQ9BQG0 1328 aaKnown RBP22.43■■□□□ 1.18
RETREG3-210ENST00000590541 NF2P35240 595 aa22.43■■□□□ 1.18
RETREG3-210ENST00000590541 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
RETREG3-210ENST00000590541 OGFOD1Q8N543 542 aa22.42■■□□□ 1.18
RETREG3-210ENST00000590541 MINPP1Q9UNW1 487 aa22.41■■□□□ 1.18
RETREG3-210ENST00000590541 SASH1O94885 1247 aa22.4■■□□□ 1.18
RETREG3-210ENST00000590541 ZNF853P0CG23 659 aa22.4■■□□□ 1.18
RETREG3-210ENST00000590541 PRKG1Q13976 671 aa22.4■■□□□ 1.18
RETREG3-210ENST00000590541 LDLRAD1Q5T700 205 aa22.4■■□□□ 1.18
RETREG3-210ENST00000590541 STRIP1Q5VSL9 837 aa22.4■■□□□ 1.18
RETREG3-210ENST00000590541 GCC1Q96CN9 775 aa22.4■■□□□ 1.18
RETREG3-210ENST00000590541 METTL22Q9BUU2 404 aaPredicted RBP22.4■■□□□ 1.18
RETREG3-210ENST00000590541 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.18
RETREG3-210ENST00000590541 CTSWP56202 376 aa22.39■■□□□ 1.17
RETREG3-210ENST00000590541 SPRYD7Q5W111 196 aa22.39■■□□□ 1.17
RETREG3-210ENST00000590541 ARMC9Q7Z3E5 817 aa22.39■■□□□ 1.17
RETREG3-210ENST00000590541 TXNRD3Q86VQ6 643 aa22.39■■□□□ 1.17
RETREG3-210ENST00000590541 FBXW7Q969H0 707 aa22.39■■□□□ 1.17
RETREG3-210ENST00000590541 CDC5LQ99459 802 aaKnown RBP22.39■■□□□ 1.17
RETREG3-210ENST00000590541 BSDC1Q9NW68 430 aaPredicted RBP22.39■■□□□ 1.17
RETREG3-210ENST00000590541 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
RETREG3-210ENST00000590541 CCT4P50991 539 aaKnown RBP22.38■■□□□ 1.17
RETREG3-210ENST00000590541 TTLL11Q8NHH1 800 aa22.38■■□□□ 1.17
RETREG3-210ENST00000590541 COA1Q9GZY4 146 aa22.38■■□□□ 1.17
RETREG3-210ENST00000590541 ZBED3Q96IU2 234 aaPredicted RBP22.37■■□□□ 1.17
RETREG3-210ENST00000590541 FZD1Q9UP38 647 aa22.37■■□□□ 1.17
RETREG3-210ENST00000590541 SPEF2Q9C093 1822 aa22.36■■□□□ 1.17
RETREG3-210ENST00000590541 ALDH1A1P00352 501 aa22.36■■□□□ 1.17
RETREG3-210ENST00000590541 MMP14P50281 582 aa22.36■■□□□ 1.17
RETREG3-210ENST00000590541 HABP4Q5JVS0 413 aaKnown RBP22.36■■□□□ 1.17
RETREG3-210ENST00000590541 APOBEC3FQ8IUX4 373 aaKnown RBP22.36■■□□□ 1.17
RETREG3-210ENST00000590541 GREM2Q9H772 168 aa22.36■■□□□ 1.17
RETREG3-210ENST00000590541 ANGEL1Q9UNK9 670 aaKnown RBP22.36■■□□□ 1.17
RETREG3-210ENST00000590541 ADAMTS8Q9UP79 889 aa22.36■■□□□ 1.17
RETREG3-210ENST00000590541 POTEFA5A3E0 1075 aa22.35■■□□□ 1.17
RETREG3-210ENST00000590541 TRIM17Q9Y577 477 aa22.35■■□□□ 1.17
RETREG3-210ENST00000590541 IGKV5-2P06315 115 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 TTLL5Q6EMB2 1281 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 OTOP1Q7RTM1 612 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 IFNL1Q8IU54 200 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 KIAA0825Q8IV33 1275 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 MAP3K2Q9Y2U5 619 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 HTTP42858 3142 aa22.34■■□□□ 1.17
RETREG3-210ENST00000590541 MANSC4A6NHS7 340 aaPredicted RBP22.33■■□□□ 1.17
RETREG3-210ENST00000590541 KLRK1P26718 216 aa22.33■■□□□ 1.17
RETREG3-210ENST00000590541 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.17
RETREG3-210ENST00000590541 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
RETREG3-210ENST00000590541 LEMD3Q9Y2U8 911 aa22.33■■□□□ 1.17
RETREG3-210ENST00000590541 MKI67P46013 3256 aaKnown RBP22.33■■□□□ 1.16
RETREG3-210ENST00000590541 DDX58O95786 925 aaKnown RBP22.32■■□□□ 1.16
RETREG3-210ENST00000590541 INHBEP58166 350 aa22.32■■□□□ 1.16
RETREG3-210ENST00000590541 MAP3K11Q16584 847 aa22.32■■□□□ 1.16
RETREG3-210ENST00000590541 INTS3Q68E01 1043 aaKnown RBP22.32■■□□□ 1.16
RETREG3-210ENST00000590541 C8orf58Q8NAV2 365 aa22.32■■□□□ 1.16
RETREG3-210ENST00000590541 MYH3P11055 1940 aa22.31■■□□□ 1.16
RETREG3-210ENST00000590541 SSC5DA1L4H1 1573 aa22.31■■□□□ 1.16
RETREG3-210ENST00000590541 COL1A1P02452 1464 aaPredicted RBP22.31■■□□□ 1.16
RETREG3-210ENST00000590541 IGF2BP3O00425 579 aaKnown RBP eCLIP22.31■■□□□ 1.16
RETREG3-210ENST00000590541 SLC10A4Q96EP9 437 aa22.31■■□□□ 1.16
RETREG3-210ENST00000590541 DEFB129Q9H1M3 183 aa22.31■■□□□ 1.16
RETREG3-210ENST00000590541 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
RETREG3-210ENST00000590541 ZBTB48P10074 688 aaPredicted RBP22.3■■□□□ 1.16
RETREG3-210ENST00000590541 GNAI1P63096 354 aa22.3■■□□□ 1.16
RETREG3-210ENST00000590541 GTF2IP78347 998 aa22.3■■□□□ 1.16
RETREG3-210ENST00000590541 CLMNQ96JQ2 1002 aa22.3■■□□□ 1.16
RETREG3-210ENST00000590541 LAMB1P07942 1786 aa22.3■■□□□ 1.16
RETREG3-210ENST00000590541 ZNF804BA4D1E1 1349 aa22.3■■□□□ 1.16
RETREG3-210ENST00000590541 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
RETREG3-210ENST00000590541 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
RETREG3-210ENST00000590541 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
RETREG3-210ENST00000590541 WNK4Q96J92 1243 aa22.29■■□□□ 1.16
RETREG3-210ENST00000590541 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.29■■□□□ 1.16
RETREG3-210ENST00000590541 PTPN22Q9Y2R2 807 aa22.29■■□□□ 1.16
RETREG3-210ENST00000590541 RBBP6Q7Z6E9 1792 aaKnown RBP22.28■■□□□ 1.16
RETREG3-210ENST00000590541 CWF19L2Q2TBE0 894 aaKnown RBP22.28■■□□□ 1.16
RETREG3-210ENST00000590541 CCDC30Q5VVM6 783 aa22.28■■□□□ 1.16
RETREG3-210ENST00000590541 IGHMBP2P38935 993 aaKnown RBP22.27■■□□□ 1.16
RETREG3-210ENST00000590541 CERS5Q8N5B7 392 aa22.27■■□□□ 1.16
RETREG3-210ENST00000590541 PCDHAC2Q9Y5I4 1007 aa22.27■■□□□ 1.16
RETREG3-210ENST00000590541 H7C1W4 665 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 PPP1R12BO60237 982 aaPredicted RBP22.26■■□□□ 1.15
RETREG3-210ENST00000590541 DLGAP5Q15398 846 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 MTMR14Q8NCE2 650 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 CD99L2Q8TCZ2 262 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 ERO1AQ96HE7 468 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 ANKRD2Q9GZV1 360 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 CD209Q9NNX6 404 aa22.26■■□□□ 1.15
RETREG3-210ENST00000590541 CENPFP49454 3210 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 NEURL1BA8MQ27 555 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 ITGA6P23229 1130 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 GJA5P36382 358 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 CAP1Q01518 475 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 CRHR2Q13324 411 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 UBE3BQ7Z3V4 1068 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 TSPYL6Q8N831 410 aa22.25■■□□□ 1.15
RETREG3-210ENST00000590541 ARMC5Q96C12 935 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms