RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 COPS6Q7L5N1 327 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 PI4KAP1Q8N8J0 262 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 CCDC136Q96JN2 1154 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 AK7Q96M32 723 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 USB1Q9BQ65 265 aaKnown RBP9.16□□□□□ -0.94
SMAD4-210ENST00000590061 RWDD1Q9H446 243 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-210ENST00000590061 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
SMAD4-210ENST00000590061 SBF2Q86WG5 1849 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 PLIN1O60240 522 aa9.15□□□□□ -0.94
SMAD4-210ENST00000590061 RPS6KA4O75676 772 aa9.15□□□□□ -0.94
SMAD4-210ENST00000590061 CRKLP46109 303 aaKnown RBP9.15□□□□□ -0.94
SMAD4-210ENST00000590061 EIF5P55010 431 aaKnown RBP9.15□□□□□ -0.94
SMAD4-210ENST00000590061 RPAP2Q8IXW5 612 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-210ENST00000590061 CCDC191Q8NCU4 936 aa9.15□□□□□ -0.94
SMAD4-210ENST00000590061 XAGE3Q8WTP9 111 aa9.15□□□□□ -0.94
SMAD4-210ENST00000590061 METTL22Q9BUU2 404 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-210ENST00000590061 C9orf78Q9NZ63 289 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-210ENST00000590061 BTAF1O14981 1849 aa9.15□□□□□ -0.95
SMAD4-210ENST00000590061 MAP3K15Q6ZN16 1313 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 A1BGP04217 495 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 GNAI2P04899 355 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 UBTFL1P0CB47 393 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-210ENST00000590061 SSFA2P28290 1259 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 PARP10Q53GL7 1025 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 TRAPPC3LQ5T215 181 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 NUTM1Q86Y26 1132 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 TMEM57Q8N5G2 664 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 PANK1Q8TE04 598 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 ZBTB40Q9NUA8 1239 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 PKD2L1Q9P0L9 805 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 MAP3K2Q9Y2U5 619 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 COG6Q9Y2V7 657 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 BRWD3Q6RI45 1802 aa9.14□□□□□ -0.95
SMAD4-210ENST00000590061 TCERG1O14776 1098 aaKnown RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 RFC4P35249 363 aa9.13□□□□□ -0.95
SMAD4-210ENST00000590061 AIMP1Q12904 312 aaKnown RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 TCIRG1Q13488 830 aa9.13□□□□□ -0.95
SMAD4-210ENST00000590061 HSP90AB4PQ58FF6 505 aa9.13□□□□□ -0.95
SMAD4-210ENST00000590061 INTS5Q6P9B9 1019 aaKnown RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 DZIP3Q86Y13 1208 aaKnown RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 CRBNQ96SW2 442 aa9.13□□□□□ -0.95
SMAD4-210ENST00000590061 PHAXQ9H814 394 aaKnown RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 CWC25Q9NXE8 425 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 RGPD3A6NKT7 1758 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-210ENST00000590061 RGPD4Q7Z3J3 1758 aa9.13□□□□□ -0.95
SMAD4-210ENST00000590061 C5P01031 1676 aa9.13□□□□□ -0.95
SMAD4-210ENST00000590061 HDAC1Q13547 482 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-210ENST00000590061 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 BEND3Q5T5X7 828 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
SMAD4-210ENST00000590061 CENPQQ7L2Z9 268 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-210ENST00000590061 G2E3Q7L622 706 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 BEGAINQ9BUH8 593 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 NYXQ9GZU5 481 aa9.12□□□□□ -0.95
SMAD4-210ENST00000590061 LY75O60449 1722 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 MOXD2PA6NHM9 499 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 GRM8O00222 908 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 FDX1P10109 184 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 RLBP1P12271 317 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 ITPK1Q13572 414 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 PROSER3Q2NL68 480 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 LRP10Q7Z4F1 713 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 RETREG3Q86VR2 466 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 EXOC6Q8TAG9 804 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 GCC1Q96CN9 775 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 SLC4A9Q96Q91 983 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 NARFQ9UHQ1 456 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 ZNF330Q9Y3S2 320 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-210ENST00000590061 COL15A1P39059 1388 aa9.11□□□□□ -0.95
SMAD4-210ENST00000590061 UTYO14607 1347 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 NEURL1BA8MQ27 555 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 JUNDP17535 347 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 NDUFV2P19404 249 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 PDE4DQ08499 809 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 GCKRQ14397 625 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 FAM182BQ5T319 152 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 TRAF7Q6Q0C0 670 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 NLGN1Q8N2Q7 840 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 STK32BQ9NY57 414 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 ADCY9O60503 1353 aa9.1□□□□□ -0.95
SMAD4-210ENST00000590061 F6X3S4 739 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 TNFRSF10AO00220 468 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 C20orf194Q5TEA3 1177 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 ZBTB38Q8NAP3 1195 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-210ENST00000590061 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 SETDB2Q96T68 719 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 MYD88Q99836 296 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 ISCA1Q9BUE6 129 aa9.09□□□□□ -0.95
SMAD4-210ENST00000590061 USP44Q9H0E7 712 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms