RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 OGFOD1Q8N543 542 aa18.41■□□□□ 0.54
CSNK1D-224ENST00000584672 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-224ENST00000584672 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-224ENST00000584672 CENPFP49454 3210 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 ATP2B4P23634 1241 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 RIC3Q7Z5B4 369 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 IFNL1Q8IU54 200 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 MYD88Q99836 296 aa18.4■□□□□ 0.54
CSNK1D-224ENST00000584672 IGF2BP3O00425 579 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSNK1D-224ENST00000584672 ALDH1A1P00352 501 aa18.39■□□□□ 0.53
CSNK1D-224ENST00000584672 LDLRAD1Q5T700 205 aa18.39■□□□□ 0.53
CSNK1D-224ENST00000584672 CLMNQ96JQ2 1002 aa18.39■□□□□ 0.53
CSNK1D-224ENST00000584672 COLQQ9Y215 455 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-224ENST00000584672 CHL1O00533 1208 aa18.38■□□□□ 0.53
CSNK1D-224ENST00000584672 TRIM28Q13263 835 aaKnown RBP18.38■□□□□ 0.53
CSNK1D-224ENST00000584672 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
CSNK1D-224ENST00000584672 SLC10A4Q96EP9 437 aa18.38■□□□□ 0.53
CSNK1D-224ENST00000584672 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
CSNK1D-224ENST00000584672 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
CSNK1D-224ENST00000584672 MANSC4A6NHS7 340 aaPredicted RBP18.37■□□□□ 0.53
CSNK1D-224ENST00000584672 PDE8AO60658 829 aa18.37■□□□□ 0.53
CSNK1D-224ENST00000584672 APOBEC3FQ8IUX4 373 aaKnown RBP18.37■□□□□ 0.53
CSNK1D-224ENST00000584672 KIAA0825Q8IV33 1275 aa18.37■□□□□ 0.53
CSNK1D-224ENST00000584672 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
CSNK1D-224ENST00000584672 CAP1Q01518 475 aa18.36■□□□□ 0.53
CSNK1D-224ENST00000584672 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
CSNK1D-224ENST00000584672 ERO1AQ96HE7 468 aa18.36■□□□□ 0.53
CSNK1D-224ENST00000584672 WNK4Q96J92 1243 aa18.36■□□□□ 0.53
CSNK1D-224ENST00000584672 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
CSNK1D-224ENST00000584672 TRIOBPQ9H2D6 2365 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 BRCA2P51587 3418 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 SSC5DA1L4H1 1573 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 MYCP01106 439 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 CRHR2Q13324 411 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 DUSP27Q5VZP5 1158 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 TXNRD3Q86VQ6 643 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 EFCC1Q9HA90 598 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 CEP290O15078 2479 aa18.35■□□□□ 0.53
CSNK1D-224ENST00000584672 MYO3BQ8WXR4 1341 aa18.34■□□□□ 0.53
CSNK1D-224ENST00000584672 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
CSNK1D-224ENST00000584672 STRIP1Q5VSL9 837 aa18.34■□□□□ 0.53
CSNK1D-224ENST00000584672 ARMC5Q96C12 935 aa18.34■□□□□ 0.53
CSNK1D-224ENST00000584672 MINPP1Q9UNW1 487 aa18.34■□□□□ 0.53
CSNK1D-224ENST00000584672 LAMB1P07942 1786 aa18.33■□□□□ 0.53
CSNK1D-224ENST00000584672 KLRK1P26718 216 aa18.33■□□□□ 0.52
CSNK1D-224ENST00000584672 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-224ENST00000584672 INHBEP58166 350 aa18.33■□□□□ 0.52
CSNK1D-224ENST00000584672 TMEM106CQ9BVX2 250 aa18.33■□□□□ 0.52
CSNK1D-224ENST00000584672 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.52
CSNK1D-224ENST00000584672 MYH3P11055 1940 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 HOXB7P09629 217 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 GJA5P36382 358 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 CCDC191Q8NCU4 936 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 CDC5LQ99459 802 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 DEFB129Q9H1M3 183 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 PCDHAC2Q9Y5I4 1007 aa18.32■□□□□ 0.52
CSNK1D-224ENST00000584672 ZBTB48P10074 688 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 CTSWP56202 376 aa18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 GTF2IP78347 998 aa18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 SP3Q02447 781 aa18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 TTLL5Q6EMB2 1281 aa18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 ZBED3Q96IU2 234 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 COA1Q9GZY4 146 aa18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 GREM2Q9H772 168 aa18.31■□□□□ 0.52
CSNK1D-224ENST00000584672 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 CLRN2A0PK11 232 aa18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 H0YGN5 161 aa18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 PPP1R12BO60237 982 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 COL1A1P02452 1464 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 OTOFQ9HC10 1997 aa18.3■□□□□ 0.52
CSNK1D-224ENST00000584672 DLGAP5Q15398 846 aa18.29■□□□□ 0.52
CSNK1D-224ENST00000584672 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
CSNK1D-224ENST00000584672 ZNF333Q96JL9 665 aa18.29■□□□□ 0.52
CSNK1D-224ENST00000584672 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-224ENST00000584672 ZSWIM8A7E2V4 1837 aa18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 F8W031 263 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 MAP3K11Q16584 847 aa18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 PTPN18Q99952 460 aa18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
CSNK1D-224ENST00000584672 SZT2Q5T011 3432 aa18.27■□□□□ 0.52
CSNK1D-224ENST00000584672 OTUD7BQ6GQQ9 843 aa18.27■□□□□ 0.52
CSNK1D-224ENST00000584672 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
CSNK1D-224ENST00000584672 TTLL11Q8NHH1 800 aa18.27■□□□□ 0.52
CSNK1D-224ENST00000584672 METTL22Q9BUU2 404 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-224ENST00000584672 ELP3Q9H9T3 547 aa18.27■□□□□ 0.52
CSNK1D-224ENST00000584672 ZNF804BA4D1E1 1349 aa18.26■□□□□ 0.51
CSNK1D-224ENST00000584672 AOX1Q06278 1338 aa18.26■□□□□ 0.51
CSNK1D-224ENST00000584672 CERS5Q8N5B7 392 aa18.26■□□□□ 0.51
CSNK1D-224ENST00000584672 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-224ENST00000584672 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms