RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 OGFOD1Q8N543 542 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 PTPN22Q9Y2R2 807 aa13.25□□□□□ -0.29
GGA3-219ENST00000584550 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
GGA3-219ENST00000584550 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
GGA3-219ENST00000584550 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
GGA3-219ENST00000584550 XDHP47989 1333 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 MANSC4A6NHS7 340 aaPredicted RBP13.23□□□□□ -0.29
GGA3-219ENST00000584550 IGF2BP3O00425 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
GGA3-219ENST00000584550 MYCP01106 439 aaPredicted RBP13.23□□□□□ -0.29
GGA3-219ENST00000584550 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 LDLRAD1Q5T700 205 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 RIC3Q7Z5B4 369 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
GGA3-219ENST00000584550 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
GGA3-219ENST00000584550 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
GGA3-219ENST00000584550 ERO1AQ96HE7 468 aa13.22□□□□□ -0.29
GGA3-219ENST00000584550 MYD88Q99836 296 aa13.22□□□□□ -0.29
GGA3-219ENST00000584550 RBBP6Q7Z6E9 1792 aaKnown RBP13.22□□□□□ -0.29
GGA3-219ENST00000584550 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
GGA3-219ENST00000584550 CHL1O00533 1208 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 ANP32CO43423 234 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 INHBEP58166 350 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 CAP1Q01518 475 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
GGA3-219ENST00000584550 CRHR2Q13324 411 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
GGA3-219ENST00000584550 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 WNK4Q96J92 1243 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 EFCC1Q9HA90 598 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
GGA3-219ENST00000584550 H0YGN5 161 aa13.2□□□□□ -0.3
GGA3-219ENST00000584550 PDE8AO60658 829 aa13.2□□□□□ -0.3
GGA3-219ENST00000584550 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
GGA3-219ENST00000584550 ARMC5Q96C12 935 aa13.2□□□□□ -0.3
GGA3-219ENST00000584550 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
GGA3-219ENST00000584550 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
GGA3-219ENST00000584550 ZNF646O15015 1829 aaPredicted RBP13.19□□□□□ -0.3
GGA3-219ENST00000584550 SPEF2Q9C093 1822 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
GGA3-219ENST00000584550 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-219ENST00000584550 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
GGA3-219ENST00000584550 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 PCCAP05165 728 aaPredicted RBP13.18□□□□□ -0.3
GGA3-219ENST00000584550 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
GGA3-219ENST00000584550 SP3Q02447 781 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 PTPN18Q99952 460 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 PCDHAC2Q9Y5I4 1007 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
GGA3-219ENST00000584550 DLL1O00548 723 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
GGA3-219ENST00000584550 KLRK1P26718 216 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 GJA5P36382 358 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
GGA3-219ENST00000584550 GTF2IP78347 998 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 OTUD7BQ6GQQ9 843 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 ZNF333Q96JL9 665 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
GGA3-219ENST00000584550 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
GGA3-219ENST00000584550 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 DLGAP5Q15398 846 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
GGA3-219ENST00000584550 GREM2Q9H772 168 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
GGA3-219ENST00000584550 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
GGA3-219ENST00000584550 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
GGA3-219ENST00000584550 HOXB7P09629 217 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 CCDC184Q52MB2 194 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
GGA3-219ENST00000584550 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
GGA3-219ENST00000584550 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
GGA3-219ENST00000584550 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
GGA3-219ENST00000584550 USP2O75604 605 aaPredicted RBP13.14□□□□□ -0.31
GGA3-219ENST00000584550 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
GGA3-219ENST00000584550 CTSWP56202 376 aa13.14□□□□□ -0.31
GGA3-219ENST00000584550 SLC17A8Q8NDX2 589 aa13.14□□□□□ -0.31
GGA3-219ENST00000584550 TTLL11Q8NHH1 800 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms