RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 MYO3BQ8WXR4 1341 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 COL4A1P02462 1669 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 FKTNO75072 461 aa15.81■□□□□ 0.12
CDK5RAP3-216ENST00000579853 ALDH1A1P00352 501 aa15.81■□□□□ 0.12
CDK5RAP3-216ENST00000579853 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
CDK5RAP3-216ENST00000579853 MOB2Q70IA6 237 aa15.8■□□□□ 0.12
CDK5RAP3-216ENST00000579853 ARMC9Q7Z3E5 817 aa15.8■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-216ENST00000579853 BRCA2P51587 3418 aa15.8■□□□□ 0.12
CDK5RAP3-216ENST00000579853 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
CDK5RAP3-216ENST00000579853 INHBEP58166 350 aa15.79■□□□□ 0.12
CDK5RAP3-216ENST00000579853 NBPF9Q3BBW0 867 aa15.79■□□□□ 0.12
CDK5RAP3-216ENST00000579853 RUNDC1Q96C34 613 aa15.79■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-216ENST00000579853 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
CDK5RAP3-216ENST00000579853 WNT10BO00744 389 aa15.78■□□□□ 0.12
CDK5RAP3-216ENST00000579853 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-216ENST00000579853 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
CDK5RAP3-216ENST00000579853 INTS3Q68E01 1043 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-216ENST00000579853 MYD88Q99836 296 aa15.78■□□□□ 0.12
CDK5RAP3-216ENST00000579853 DDX58O95786 925 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 DACT2Q5SW24 774 aa15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 PRAMEF18Q5VWM3 479 aa15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 APOBEC3FQ8IUX4 373 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 COA1Q9GZY4 146 aa15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 BSDC1Q9NW68 430 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-216ENST00000579853 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 PTPN12Q05209 780 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 LDLRAD1Q5T700 205 aa15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 SPRYD7Q5W111 196 aa15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 CCDC85AQ96PX6 553 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 METTL22Q9BUU2 404 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MBIPQ9NS73 344 aa15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MINPP1Q9UNW1 487 aa15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 SCAF8Q9UPN6 1271 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-216ENST00000579853 COL1A1P02452 1464 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 UNCXA6NJT0 531 aa15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 CTSWP56202 376 aa15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 LEMD3Q9Y2U8 911 aa15.74■□□□□ 0.11
CDK5RAP3-216ENST00000579853 ZBTB48P10074 688 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-216ENST00000579853 GNAI1P63096 354 aa15.73■□□□□ 0.11
CDK5RAP3-216ENST00000579853 TTLL5Q6EMB2 1281 aa15.73■□□□□ 0.11
CDK5RAP3-216ENST00000579853 SLC10A4Q96EP9 437 aa15.73■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 PPP1R12BO60237 982 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 ZNF853P0CG23 659 aa15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 HABP4Q5JVS0 413 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 OTUD7BQ6GQQ9 843 aa15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 TTLL11Q8NHH1 800 aa15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 ANGEL1Q9UNK9 670 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 TRIM17Q9Y577 477 aa15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MYH3P11055 1940 aa15.72■□□□□ 0.11
CDK5RAP3-216ENST00000579853 SASH1O94885 1247 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 IGHMBP2P38935 993 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 NEXNQ0ZGT2 675 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 PRKG1Q13976 671 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 CCDC30Q5VVM6 783 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 IFNL1Q8IU54 200 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 ERO1AQ96HE7 468 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 MXD3Q9BW11 206 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 ANKRD2Q9GZV1 360 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 PPP2R3BQ9Y5P8 575 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 TRIOBPQ9H2D6 2365 aa15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 RANBP2P49792 3224 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-216ENST00000579853 OTOP1Q7RTM1 612 aa15.7■□□□□ 0.1
CDK5RAP3-216ENST00000579853 JARID2Q92833 1246 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ZBED3Q96IU2 234 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-216ENST00000579853 DEFB129Q9H1M3 183 aa15.7■□□□□ 0.1
CDK5RAP3-216ENST00000579853 GREM2Q9H772 168 aa15.7■□□□□ 0.1
CDK5RAP3-216ENST00000579853 A0A0C4DFX4 3053 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ELL2O00472 640 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 DLGAP5Q15398 846 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 KSR2Q6VAB6 950 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 KIAA0825Q8IV33 1275 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 MAP3K2Q9Y2U5 619 aa15.69■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ZNF804BA4D1E1 1349 aa15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ZNF646O15015 1829 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 SZT2Q5T011 3432 aa15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 MYO1BO43795 1136 aa15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 MTMR14Q8NCE2 650 aa15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
CDK5RAP3-216ENST00000579853 RBBP6Q7Z6E9 1792 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 GTF2IP78347 998 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 ARHGEF6Q15052 776 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
CDK5RAP3-216ENST00000579853 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms