RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 C5P01031 1676 aa12.2□□□□□ -0.46
CFDP1-206ENST00000566254 TOMM70O94826 608 aa12.2□□□□□ -0.46
CFDP1-206ENST00000566254 DKK1O94907 266 aa12.2□□□□□ -0.46
CFDP1-206ENST00000566254 SIX5Q8N196 739 aa12.2□□□□□ -0.46
CFDP1-206ENST00000566254 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
CFDP1-206ENST00000566254 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
CFDP1-206ENST00000566254 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
CFDP1-206ENST00000566254 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
CFDP1-206ENST00000566254 HTRA3P83110 453 aa12.19□□□□□ -0.46
CFDP1-206ENST00000566254 ARID5BQ14865 1188 aa12.19□□□□□ -0.46
CFDP1-206ENST00000566254 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
CFDP1-206ENST00000566254 MPNDQ8N594 471 aa12.19□□□□□ -0.46
CFDP1-206ENST00000566254 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
CFDP1-206ENST00000566254 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 TONSLQ96HA7 1378 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 SIAH2O43255 324 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 FBLN1P23142 703 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 HOXC9P31274 260 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 SLC19A1P41440 591 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 GRM5P41594 1212 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 SLC12A5Q9H2X9 1139 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
CFDP1-206ENST00000566254 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
CFDP1-206ENST00000566254 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
CFDP1-206ENST00000566254 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
CFDP1-206ENST00000566254 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
CFDP1-206ENST00000566254 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
CFDP1-206ENST00000566254 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
CFDP1-206ENST00000566254 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
CFDP1-206ENST00000566254 WNT7AO00755 349 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 FSHRP23945 695 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 SCTRP47872 440 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 AMPHP49418 695 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
CFDP1-206ENST00000566254 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
CFDP1-206ENST00000566254 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
CFDP1-206ENST00000566254 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 WDR90Q96KV7 1748 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 MYCP01106 439 aaPredicted RBP12.15□□□□□ -0.46
CFDP1-206ENST00000566254 SWI5Q1ZZU3 235 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 NBPF6Q5VWK0 638 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 TNS4Q8IZW8 715 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 TPCN2Q8NHX9 752 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 NBPF4Q96M43 638 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
CFDP1-206ENST00000566254 SEC13P55735 322 aa12.14□□□□□ -0.47
CFDP1-206ENST00000566254 ERVK-9P63128 1117 aa12.14□□□□□ -0.47
CFDP1-206ENST00000566254 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
CFDP1-206ENST00000566254 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
CFDP1-206ENST00000566254 SSFA2P28290 1259 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 PRELPP51888 382 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 PHLDB3Q6NSJ2 640 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 RAPGEF4Q8WZA2 1011 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 MRGPRX2Q96LB1 330 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 TERF2IPQ9NYB0 399 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
CFDP1-206ENST00000566254 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
CFDP1-206ENST00000566254 ADH1CP00326 375 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
CFDP1-206ENST00000566254 DHX9Q08211 1270 aaKnown RBP12.12□□□□□ -0.47
CFDP1-206ENST00000566254 SPRYD7Q5W111 196 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 ARHGAP27Q6ZUM4 889 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 COG3Q96JB2 828 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 TMPRSS4Q9NRS4 437 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 UBR3Q6ZT12 1888 aa12.12□□□□□ -0.47
CFDP1-206ENST00000566254 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 A0A0G2JLW4 131 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 MMP10P09238 476 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
CFDP1-206ENST00000566254 RRS1Q15050 365 aaKnown RBP12.11□□□□□ -0.47
CFDP1-206ENST00000566254 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
CFDP1-206ENST00000566254 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
CFDP1-206ENST00000566254 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
CFDP1-206ENST00000566254 CYP27B1O15528 508 aa12.1□□□□□ -0.47
CFDP1-206ENST00000566254 NR5A1Q13285 461 aa12.1□□□□□ -0.47
CFDP1-206ENST00000566254 CCDC116Q8IYX3 515 aa12.1□□□□□ -0.47
CFDP1-206ENST00000566254 PIGBQ92521 554 aa12.1□□□□□ -0.47
CFDP1-206ENST00000566254 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
CFDP1-206ENST00000566254 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
CFDP1-206ENST00000566254 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
CFDP1-206ENST00000566254 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
CFDP1-206ENST00000566254 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
CFDP1-206ENST00000566254 N4BP2Q86UW6 1770 aaPredicted RBP12.08□□□□□ -0.48
CFDP1-206ENST00000566254 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
CFDP1-206ENST00000566254 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
CFDP1-206ENST00000566254 SIK1P57059 783 aa12.08□□□□□ -0.48
CFDP1-206ENST00000566254 TGFB2P61812 414 aa12.08□□□□□ -0.48
CFDP1-206ENST00000566254 FSTL1Q12841 308 aa12.08□□□□□ -0.48
CFDP1-206ENST00000566254 PPP1R26Q5T8A7 1209 aaPredicted RBP12.08□□□□□ -0.48
CFDP1-206ENST00000566254 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms