RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 LATS2Q9NRM7 1088 aa8.48□□□□□ -1.05
USP8-218ENST00000561330 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
USP8-218ENST00000561330 NFKBIEO00221 500 aa8.47□□□□□ -1.05
USP8-218ENST00000561330 PTPRAP18433 802 aa8.47□□□□□ -1.05
USP8-218ENST00000561330 RASSF7Q02833 373 aa8.47□□□□□ -1.05
USP8-218ENST00000561330 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
USP8-218ENST00000561330 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
USP8-218ENST00000561330 ALYREFQ86V81 257 aaKnown RBP8.47□□□□□ -1.05
USP8-218ENST00000561330 HHIPQ96QV1 700 aa8.47□□□□□ -1.05
USP8-218ENST00000561330 PNMA6FA0A0J9YX94 578 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 ANKRD33BA6NCL7 494 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 COL8A1P27658 744 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 CDC27P30260 824 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 MAPK8P45983 427 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 BAG6P46379 1132 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 RAC1P63000 192 aa8.46□□□□□ -1.06
USP8-218ENST00000561330 FMR1Q06787 632 aaKnown RBP eCLIP8.46□□□□□ -1.06
USP8-218ENST00000561330 TRIM28Q13263 835 aaKnown RBP8.46□□□□□ -1.06
USP8-218ENST00000561330 ENOX2Q16206 610 aaKnown RBP8.46□□□□□ -1.06
USP8-218ENST00000561330 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.06
USP8-218ENST00000561330 A0A1W2PP55 124 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 TMCO4Q5TGY1 634 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 ILDR2Q71H61 639 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 MUC3BQ9H195 1237 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 NPHS2Q9NP85 383 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 PPME1Q9Y570 386 aa8.45□□□□□ -1.06
USP8-218ENST00000561330 A0A0A0MRY4 1105 aa8.44□□□□□ -1.06
USP8-218ENST00000561330 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
USP8-218ENST00000561330 GSK3AP49840 483 aa8.44□□□□□ -1.06
USP8-218ENST00000561330 TRIM26Q12899 539 aaPredicted RBP8.44□□□□□ -1.06
USP8-218ENST00000561330 DTWD1Q8N5C7 304 aa8.44□□□□□ -1.06
USP8-218ENST00000561330 ADAM19Q9H013 955 aa8.44□□□□□ -1.06
USP8-218ENST00000561330 NLRP2Q9NX02 1062 aa8.44□□□□□ -1.06
USP8-218ENST00000561330 GADD45BO75293 160 aaPredicted RBP8.43□□□□□ -1.06
USP8-218ENST00000561330 GDF11O95390 407 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 P4HBP07237 508 aaKnown RBP8.43□□□□□ -1.06
USP8-218ENST00000561330 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 ATP2B2Q01814 1243 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
USP8-218ENST00000561330 TMEM151AQ8N4L1 468 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 EPS8L3Q8TE67 593 aaKnown RBP8.43□□□□□ -1.06
USP8-218ENST00000561330 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 BHLHE41Q9C0J9 482 aaPredicted RBP8.43□□□□□ -1.06
USP8-218ENST00000561330 EHD4Q9H223 541 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 LIN7BQ9HAP6 207 aa8.43□□□□□ -1.06
USP8-218ENST00000561330 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
USP8-218ENST00000561330 CABP4P57796 275 aa8.42□□□□□ -1.06
USP8-218ENST00000561330 COL19A1Q14993 1142 aa8.42□□□□□ -1.06
USP8-218ENST00000561330 ADAMTSL4Q6UY14 1074 aa8.42□□□□□ -1.06
USP8-218ENST00000561330 CCNJLQ8IV13 435 aa8.42□□□□□ -1.06
USP8-218ENST00000561330 ASAP3Q8TDY4 903 aa8.42□□□□□ -1.06
USP8-218ENST00000561330 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
USP8-218ENST00000561330 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 CDC25BP30305 580 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 ALG1LQ6GMV1 187 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 FAM117BQ6P1L5 589 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 MAP4K3Q8IVH8 894 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 FMR1NBQ8N0W7 255 aaPredicted RBP8.41□□□□□ -1.06
USP8-218ENST00000561330 FBF1Q8TES7 1133 aa8.41□□□□□ -1.06
USP8-218ENST00000561330 SRA1Q9HD15 236 aaKnown RBP8.41□□□□□ -1.06
USP8-218ENST00000561330 METTL12A8MUP2 240 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 LDHBP07195 334 aaKnown RBP8.4□□□□□ -1.06
USP8-218ENST00000561330 ELNP15502 786 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 ERCC3P19447 782 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 EPHA1P21709 976 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 EAPPQ56P03 285 aaPredicted RBP8.4□□□□□ -1.06
USP8-218ENST00000561330 TCF12Q99081 682 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 TRAK1Q9UPV9 953 aa8.4□□□□□ -1.06
USP8-218ENST00000561330 H3BRJ5 948 aa8.39□□□□□ -1.07
USP8-218ENST00000561330 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
USP8-218ENST00000561330 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP8-218ENST00000561330 TXNDC11Q6PKC3 985 aa8.39□□□□□ -1.07
USP8-218ENST00000561330 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
USP8-218ENST00000561330 NPAS4Q8IUM7 802 aa8.39□□□□□ -1.07
USP8-218ENST00000561330 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
USP8-218ENST00000561330 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
USP8-218ENST00000561330 A0A096LPE4 126 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 A0A1W2PPZ6 126 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 KRBA1A5PL33 1030 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 APBA3O96018 575 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 FGD1P98174 961 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 GRM2Q14416 872 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 GRIK4Q16099 956 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
USP8-218ENST00000561330 FSCN2O14926 492 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 GRIA4P48058 902 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 IKBKEQ14164 716 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 SPRED3Q2MJR0 410 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 VN1R5Q7Z5H4 357 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 WNT8BQ93098 351 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
USP8-218ENST00000561330 TMEM238LA0A1B0GVL6 79 aa8.36□□□□□ -1.07
USP8-218ENST00000561330 DLL1O00548 723 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms