RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 ATCAYQ86WG3 371 aa7.27□□□□□ -1.25
LRRC28-218ENST00000560236 UTP4Q969X6 686 aaKnown RBP7.27□□□□□ -1.25
LRRC28-218ENST00000560236 POP1Q99575 1024 aaKnown RBP7.27□□□□□ -1.25
LRRC28-218ENST00000560236 SLAIN2Q9P270 581 aa7.27□□□□□ -1.25
LRRC28-218ENST00000560236 TM4SF5O14894 197 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 UVSSAQ2YD98 709 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 ARMC10Q8N2F6 343 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 CCDC97Q96F63 343 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-218ENST00000560236 ADAM19Q9H013 955 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 SEC31BQ9NQW1 1179 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 CNTN3Q9P232 1028 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 KANSL3Q9P2N6 904 aa7.26□□□□□ -1.25
LRRC28-218ENST00000560236 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
LRRC28-218ENST00000560236 RPLP1P05386 114 aaKnown RBP7.25□□□□□ -1.25
LRRC28-218ENST00000560236 PCSK2P16519 638 aa7.25□□□□□ -1.25
LRRC28-218ENST00000560236 CABP4P57796 275 aa7.25□□□□□ -1.25
LRRC28-218ENST00000560236 TTC16Q8NEE8 873 aa7.25□□□□□ -1.25
LRRC28-218ENST00000560236 FOXD4L4Q8WXT5 416 aaPredicted RBP7.25□□□□□ -1.25
LRRC28-218ENST00000560236 KLHDC7BQ96G42 594 aa7.25□□□□□ -1.25
LRRC28-218ENST00000560236 NISCHQ9Y2I1 1504 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 H3BRJ5 948 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 ADAM11O75078 769 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 COBLO75128 1261 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 TGFB1P01137 390 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 CES1P23141 567 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 UBASH3BQ8TF42 649 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 EDEM1Q92611 657 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 WNT8BQ93098 351 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 FAM46AQ96IP4 442 aaKnown RBP7.24□□□□□ -1.25
LRRC28-218ENST00000560236 C7orf69Q9H7B7 122 aa7.24□□□□□ -1.25
LRRC28-218ENST00000560236 PIP4K2BP78356 416 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 DNM1Q05193 864 aaKnown RBP7.23□□□□□ -1.25
LRRC28-218ENST00000560236 NFIAQ12857 509 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 MCTP1Q6DN14 999 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 XKR5Q6UX68 686 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 TRIM42Q8IWZ5 723 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 HELQQ8TDG4 1101 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 MYRFLQ96LU7 910 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 SALL4Q9UJQ4 1053 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 SERPINA10Q9UK55 444 aa7.23□□□□□ -1.25
LRRC28-218ENST00000560236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-218ENST00000560236 HMX2A2RU54 273 aa7.22□□□□□ -1.25
LRRC28-218ENST00000560236 SART1O43290 800 aaKnown RBP7.22□□□□□ -1.25
LRRC28-218ENST00000560236 MED26O95402 600 aa7.22□□□□□ -1.25
LRRC28-218ENST00000560236 C8orf34Q49A92 452 aa7.22□□□□□ -1.25
LRRC28-218ENST00000560236 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
LRRC28-218ENST00000560236 ZDHHC13Q8IUH4 622 aa7.22□□□□□ -1.25
LRRC28-218ENST00000560236 C1orf127Q8N9H9 656 aa7.22□□□□□ -1.25
LRRC28-218ENST00000560236 ZMYND15Q9H091 742 aa7.22□□□□□ -1.25
LRRC28-218ENST00000560236 KIAA1324LA8MWY0 1029 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-218ENST00000560236 PDE2AO00408 941 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-218ENST00000560236 PDGFAP04085 211 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 ACPPP15309 386 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 NLRP12P59046 1061 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 RNF43Q68DV7 783 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 FAM20CQ8IXL6 584 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 SLC7A3Q8WY07 619 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 GGNBP2Q9H3C7 697 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 OSGEPQ9NPF4 335 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 DZANK1Q9NVP4 752 aa7.21□□□□□ -1.26
LRRC28-218ENST00000560236 NFKBIEO00221 500 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 GRIK1P39086 918 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 ANKRD34AQ69YU3 496 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 CLEC10AQ8IUN9 316 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 PMEPA1Q969W9 287 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 KRTAP4-12Q9BQ66 201 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 DBNDD2Q9BQY9 259 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 RNF208Q9H0X6 261 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 KCNF1Q9H3M0 494 aa7.2□□□□□ -1.26
LRRC28-218ENST00000560236 A6NHS1 94 aa7.19□□□□□ -1.26
LRRC28-218ENST00000560236 TRPA1O75762 1119 aa7.19□□□□□ -1.26
LRRC28-218ENST00000560236 BMP3P12645 472 aa7.19□□□□□ -1.26
LRRC28-218ENST00000560236 MZF1P28698 734 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-218ENST00000560236 EIF1AXP47813 144 aaKnown RBP7.19□□□□□ -1.26
LRRC28-218ENST00000560236 ARL4DP49703 201 aa7.19□□□□□ -1.26
LRRC28-218ENST00000560236 INTS5Q6P9B9 1019 aaKnown RBP7.19□□□□□ -1.26
LRRC28-218ENST00000560236 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
LRRC28-218ENST00000560236 HHIPQ96QV1 700 aa7.19□□□□□ -1.26
LRRC28-218ENST00000560236 FAM83CQ9BQN1 747 aa7.19□□□□□ -1.26
LRRC28-218ENST00000560236 COL17A1Q9UMD9 1497 aaPredicted RBP7.18□□□□□ -1.26
LRRC28-218ENST00000560236 MPSTP25325 297 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 PREPP48147 710 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 IRAK1P51617 712 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 FDX2Q6P4F2 183 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 BEND4Q6ZU67 534 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 GTF3C2Q8WUA4 911 aaPredicted RBP7.18□□□□□ -1.26
LRRC28-218ENST00000560236 RUSC1Q9BVN2 902 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 CHRDQ9H2X0 955 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 SOX13Q9UN79 622 aa7.18□□□□□ -1.26
LRRC28-218ENST00000560236 GP2P55259 537 aaKnown RBP7.17□□□□□ -1.26
LRRC28-218ENST00000560236 C19orf57Q0VDD7 668 aa7.17□□□□□ -1.26
LRRC28-218ENST00000560236 ALKBH2Q6NS38 261 aa7.17□□□□□ -1.26
LRRC28-218ENST00000560236 TMEM102Q8N9M5 508 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-218ENST00000560236 HIF3AQ9Y2N7 669 aa7.17□□□□□ -1.26
LRRC28-218ENST00000560236 OAS3Q9Y6K5 1087 aaKnown RBP7.17□□□□□ -1.26
LRRC28-218ENST00000560236 PRR19A6NJB7 356 aa7.16□□□□□ -1.26
LRRC28-218ENST00000560236 PAX4O43316 350 aa7.16□□□□□ -1.26
LRRC28-218ENST00000560236 GAS2O43903 313 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms