RNA–Protein interactions for RNA: ENST00000556033.5

LINC01146-204, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 1 (best) BASIC

Gene LINC01146, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-204ENST00000556033 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
LINC01146-204ENST00000556033 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
LINC01146-204ENST00000556033 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
LINC01146-204ENST00000556033 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
LINC01146-204ENST00000556033 CENPFP49454 3210 aa12.75□□□□□ -0.37
LINC01146-204ENST00000556033 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
LINC01146-204ENST00000556033 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
LINC01146-204ENST00000556033 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
LINC01146-204ENST00000556033 ZNF296Q8WUU4 475 aaPredicted RBP12.75□□□□□ -0.37
LINC01146-204ENST00000556033 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
LINC01146-204ENST00000556033 UBE2Q2LH0YL09 131 aa12.74□□□□□ -0.37
LINC01146-204ENST00000556033 USP17L8P0C7I0 530 aa12.74□□□□□ -0.37
LINC01146-204ENST00000556033 NF2P35240 595 aa12.74□□□□□ -0.37
LINC01146-204ENST00000556033 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
LINC01146-204ENST00000556033 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
LINC01146-204ENST00000556033 GCC1Q96CN9 775 aa12.74□□□□□ -0.37
LINC01146-204ENST00000556033 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
LINC01146-204ENST00000556033 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
LINC01146-204ENST00000556033 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
LINC01146-204ENST00000556033 TIE1P35590 1138 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
LINC01146-204ENST00000556033 KRT24Q2M2I5 525 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
LINC01146-204ENST00000556033 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
LINC01146-204ENST00000556033 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
LINC01146-204ENST00000556033 COL4A1P02462 1669 aa12.73□□□□□ -0.37
LINC01146-204ENST00000556033 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
LINC01146-204ENST00000556033 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
LINC01146-204ENST00000556033 ZNF280AP59817 542 aaPredicted RBP12.72□□□□□ -0.37
LINC01146-204ENST00000556033 CCDC152Q4G0S7 254 aa12.72□□□□□ -0.37
LINC01146-204ENST00000556033 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
LINC01146-204ENST00000556033 OGFOD1Q8N543 542 aa12.72□□□□□ -0.37
LINC01146-204ENST00000556033 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
LINC01146-204ENST00000556033 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
LINC01146-204ENST00000556033 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
LINC01146-204ENST00000556033 MKI67P46013 3256 aaKnown RBP12.71□□□□□ -0.37
LINC01146-204ENST00000556033 USP17L3A6NCW0 530 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 USP17L4A6NCW7 530 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 GPR25O00155 361 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 FKTNO75072 461 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 SREBF2Q12772 1141 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.37
LINC01146-204ENST00000556033 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
LINC01146-204ENST00000556033 XDHP47989 1333 aa12.7□□□□□ -0.38
LINC01146-204ENST00000556033 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
LINC01146-204ENST00000556033 PRKG1Q13976 671 aa12.7□□□□□ -0.38
LINC01146-204ENST00000556033 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 TM4SF4P48230 202 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 CCDC146Q8IYE0 955 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 ZBTB38Q8NAP3 1195 aaPredicted RBP12.69□□□□□ -0.38
LINC01146-204ENST00000556033 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
LINC01146-204ENST00000556033 CEP290O15078 2479 aa12.68□□□□□ -0.38
LINC01146-204ENST00000556033 CHL1O00533 1208 aa12.68□□□□□ -0.38
LINC01146-204ENST00000556033 PDE8AO60658 829 aa12.68□□□□□ -0.38
LINC01146-204ENST00000556033 MYD88Q99836 296 aa12.68□□□□□ -0.38
LINC01146-204ENST00000556033 ALDH1A1P00352 501 aa12.67□□□□□ -0.38
LINC01146-204ENST00000556033 HOXB7P09629 217 aa12.67□□□□□ -0.38
LINC01146-204ENST00000556033 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
LINC01146-204ENST00000556033 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
LINC01146-204ENST00000556033 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
LINC01146-204ENST00000556033 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
LINC01146-204ENST00000556033 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
LINC01146-204ENST00000556033 ZNF609O15014 1411 aa12.67□□□□□ -0.38
LINC01146-204ENST00000556033 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
LINC01146-204ENST00000556033 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
LINC01146-204ENST00000556033 BRCA2P51587 3418 aa12.66□□□□□ -0.38
LINC01146-204ENST00000556033 NUBP1P53384 320 aa12.66□□□□□ -0.38
LINC01146-204ENST00000556033 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
LINC01146-204ENST00000556033 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
LINC01146-204ENST00000556033 GMLQ99445 158 aa12.66□□□□□ -0.38
LINC01146-204ENST00000556033 CDC5LQ99459 802 aaKnown RBP12.66□□□□□ -0.38
LINC01146-204ENST00000556033 CWC25Q9NXE8 425 aaPredicted RBP12.66□□□□□ -0.38
LINC01146-204ENST00000556033 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
LINC01146-204ENST00000556033 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
LINC01146-204ENST00000556033 WNT10BO00744 389 aa12.65□□□□□ -0.38
LINC01146-204ENST00000556033 SASH1O94885 1247 aa12.65□□□□□ -0.38
LINC01146-204ENST00000556033 PCCAP05165 728 aaPredicted RBP12.65□□□□□ -0.38
LINC01146-204ENST00000556033 PTPN12Q05209 780 aaKnown RBP12.65□□□□□ -0.38
LINC01146-204ENST00000556033 APOBEC3FQ8IUX4 373 aaKnown RBP12.65□□□□□ -0.38
LINC01146-204ENST00000556033 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
LINC01146-204ENST00000556033 MXD3Q9BW11 206 aa12.65□□□□□ -0.38
LINC01146-204ENST00000556033 HTTP42858 3142 aa12.64□□□□□ -0.39
LINC01146-204ENST00000556033 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
LINC01146-204ENST00000556033 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01146-204ENST00000556033 HABP4Q5JVS0 413 aaKnown RBP12.64□□□□□ -0.39
LINC01146-204ENST00000556033 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
LINC01146-204ENST00000556033 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
LINC01146-204ENST00000556033 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
LINC01146-204ENST00000556033 PLSCR2Q9NRY7 297 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 284.6 ms