RNA–Protein interactions for RNA: ENST00000554426.5

CKB-208, Transcript of creatine kinase B, human

TSL 5

Gene CKB, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKB-208	ENST00000554426	IGKV5-2	P06315	115 aa		33.93	■■■■□ 3.02
CKB-208	ENST00000554426	TM4SF4	P48230	202 aa		33.93	■■■■□ 3.02
CKB-208	ENST00000554426	CDC5L	Q99459	802 aa	Known RBP	33.93	■■■■□ 3.02
CKB-208	ENST00000554426	GREM2	Q9H772	168 aa		33.93	■■■■□ 3.02
CKB-208	ENST00000554426	MAP3K2	Q9Y2U5	619 aa		33.93	■■■■□ 3.02
CKB-208	ENST00000554426	GNAI1	P63096	354 aa		33.92	■■■■□ 3.02
CKB-208	ENST00000554426	MKRN3	Q13064	507 aa	Known RBP	33.92	■■■■□ 3.02
CKB-208	ENST00000554426	PKN2	Q16513	984 aa	Known RBP	33.92	■■■■□ 3.02
CKB-208	ENST00000554426	PRPF38B	Q5VTL8	546 aa	Known RBP	33.92	■■■■□ 3.02
CKB-208	ENST00000554426	TXNRD3	Q86VQ6	643 aa		33.92	■■■■□ 3.02
CKB-208	ENST00000554426	BSDC1	Q9NW68	430 aa	Predicted RBP	33.92	■■■■□ 3.02
CKB-208	ENST00000554426	HDAC9	Q9UKV0	1011 aa		33.92	■■■■□ 3.02
CKB-208	ENST00000554426	ZNF646	O15015	1829 aa	Predicted RBP	33.92	■■■■□ 3.02
CKB-208	ENST00000554426	APAF1	O14727	1248 aa		33.91	■■■■□ 3.02
CKB-208	ENST00000554426	TTLL12	Q14166	644 aa	Predicted RBP	33.91	■■■■□ 3.02
CKB-208	ENST00000554426	SASH1	O94885	1247 aa		33.9	■■■■□ 3.02
CKB-208	ENST00000554426	CCT4	P50991	539 aa	Known RBP	33.9	■■■■□ 3.02
CKB-208	ENST00000554426	GPR25	O00155	361 aa		33.89	■■■■□ 3.02
CKB-208	ENST00000554426	DDX58	O95786	925 aa	Known RBP	33.89	■■■■□ 3.02
CKB-208	ENST00000554426	FBXW7	Q969H0	707 aa		33.89	■■■■□ 3.02
CKB-208	ENST00000554426	R3HDML	Q9H3Y0	253 aa		33.89	■■■■□ 3.02
CKB-208	ENST00000554426	STRIP1	Q5VSL9	837 aa		33.88	■■■■□ 3.01
CKB-208	ENST00000554426	OGFOD1	Q8N543	542 aa		33.88	■■■■□ 3.01
CKB-208	ENST00000554426	TSPYL6	Q8N831	410 aa		33.88	■■■■□ 3.01
CKB-208	ENST00000554426	PTPN12	Q05209	780 aa	Known RBP	33.87	■■■■□ 3.01
CKB-208	ENST00000554426	NOM1	Q5C9Z4	860 aa	Known RBP	33.87	■■■■□ 3.01
CKB-208	ENST00000554426	PI4KAP2	A4QPH2	592 aa		33.86	■■■■□ 3.01
CKB-208	ENST00000554426	KLRK1	P26718	216 aa		33.86	■■■■□ 3.01
CKB-208	ENST00000554426	CCDC30	Q5VVM6	783 aa		33.86	■■■■□ 3.01
CKB-208	ENST00000554426	KSR2	Q6VAB6	950 aa		33.86	■■■■□ 3.01
CKB-208	ENST00000554426	PI4KAP1	Q8N8J0	262 aa		33.86	■■■■□ 3.01
CKB-208	ENST00000554426	COA1	Q9GZY4	146 aa		33.86	■■■■□ 3.01
CKB-208	ENST00000554426	MYO3B	Q8WXR4	1341 aa		33.85	■■■■□ 3.01
CKB-208	ENST00000554426	CALD1	Q05682	793 aa	Known RBP	33.84	■■■■□ 3.01
CKB-208	ENST00000554426	PRKG1	Q13976	671 aa		33.84	■■■■□ 3.01
CKB-208	ENST00000554426	CWF19L2	Q2TBE0	894 aa	Known RBP	33.84	■■■■□ 3.01
CKB-208	ENST00000554426	NF2	P35240	595 aa		33.83	■■■■□ 3.01
CKB-208	ENST00000554426	ZBED3	Q96IU2	234 aa	Predicted RBP	33.83	■■■■□ 3.01
CKB-208	ENST00000554426	SPEF2	Q9C093	1822 aa		33.82	■■■■□ 3
CKB-208	ENST00000554426	LDLRAD1	Q5T700	205 aa		33.82	■■■■□ 3
CKB-208	ENST00000554426	FBXO46	Q6PJ61	603 aa	Predicted RBP	33.82	■■■■□ 3
CKB-208	ENST00000554426	CFHR5	Q9BXR6	569 aa		33.82	■■■■□ 3
CKB-208	ENST00000554426	KIAA0825	Q8IV33	1275 aa		33.81	■■■■□ 3
CKB-208	ENST00000554426	FZD1	Q9UP38	647 aa		33.81	■■■■□ 3
CKB-208	ENST00000554426	LEMD3	Q9Y2U8	911 aa		33.81	■■■■□ 3
CKB-208	ENST00000554426	NEURL1B	A8MQ27	555 aa		33.8	■■■■□ 3
CKB-208	ENST00000554426	SREBF2	Q12772	1141 aa		33.8	■■■■□ 3
CKB-208	ENST00000554426	TTLL5	Q6EMB2	1281 aa		33.8	■■■■□ 3
CKB-208	ENST00000554426	HTT	P42858	3142 aa		33.8	■■■■□ 3
CKB-208	ENST00000554426		H7C1W4	665 aa		33.79	■■■■□ 3
CKB-208	ENST00000554426	SPRYD7	Q5W111	196 aa		33.79	■■■■□ 3
CKB-208	ENST00000554426	ARMC9	Q7Z3E5	817 aa		33.79	■■■■□ 3
CKB-208	ENST00000554426	UBE3B	Q7Z3V4	1068 aa		33.79	■■■■□ 3
CKB-208	ENST00000554426	ZNF804B	A4D1E1	1349 aa		33.79	■■■■□ 3
CKB-208	ENST00000554426	FKTN	O75072	461 aa		33.78	■■■■□ 3
CKB-208	ENST00000554426	APOBEC3F	Q8IUX4	373 aa	Known RBP	33.78	■■■■□ 3
CKB-208	ENST00000554426	G2E3	Q7L622	706 aa		33.77	■■■■□ 3
CKB-208	ENST00000554426	IGHMBP2	P38935	993 aa	Known RBP	33.76	■■■□□ 2.99
CKB-208	ENST00000554426	MMP14	P50281	582 aa		33.76	■■■□□ 2.99
CKB-208	ENST00000554426	GTF2I	P78347	998 aa		33.76	■■■□□ 2.99
CKB-208	ENST00000554426	NEXN	Q0ZGT2	675 aa		33.76	■■■□□ 2.99
CKB-208	ENST00000554426	ANGEL1	Q9UNK9	670 aa	Known RBP	33.76	■■■□□ 2.99
CKB-208	ENST00000554426	TSR2	Q969E8	191 aa	Known RBP	33.75	■■■□□ 2.99
CKB-208	ENST00000554426	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.75	■■■□□ 2.99
CKB-208	ENST00000554426	MYH3	P11055	1940 aa		33.75	■■■□□ 2.99
CKB-208	ENST00000554426	ITGA6	P23229	1130 aa		33.74	■■■□□ 2.99
CKB-208	ENST00000554426	CHMP4A	Q9BY43	222 aa		33.74	■■■□□ 2.99
CKB-208	ENST00000554426	CASP7	P55210	303 aa		33.73	■■■□□ 2.99
CKB-208	ENST00000554426	CERS5	Q8N5B7	392 aa		33.73	■■■□□ 2.99
CKB-208	ENST00000554426	PLA2G12B	Q9BX93	195 aa		33.73	■■■□□ 2.99
CKB-208	ENST00000554426	PCDHAC2	Q9Y5I4	1007 aa		33.73	■■■□□ 2.99
CKB-208	ENST00000554426	MKI67	P46013	3256 aa	Known RBP	33.73	■■■□□ 2.99
CKB-208	ENST00000554426	SSC5D	A1L4H1	1573 aa		33.72	■■■□□ 2.99
CKB-208	ENST00000554426	ANKRD2	Q9GZV1	360 aa		33.72	■■■□□ 2.99
CKB-208	ENST00000554426	DEFB129	Q9H1M3	183 aa		33.72	■■■□□ 2.99
CKB-208	ENST00000554426	IRS2	Q9Y4H2	1338 aa		33.72	■■■□□ 2.99
CKB-208	ENST00000554426	SNAP23	O00161	211 aa		33.71	■■■□□ 2.99
CKB-208	ENST00000554426	GCKR	Q14397	625 aa		33.71	■■■□□ 2.99
CKB-208	ENST00000554426	CLMN	Q96JQ2	1002 aa		33.71	■■■□□ 2.99
CKB-208	ENST00000554426	CD209	Q9NNX6	404 aa		33.71	■■■□□ 2.99
CKB-208	ENST00000554426	CSF1R	P07333	972 aa		33.69	■■■□□ 2.98
CKB-208	ENST00000554426	CHRND	Q07001	517 aa		33.69	■■■□□ 2.98
CKB-208	ENST00000554426	MAP3K11	Q16584	847 aa		33.69	■■■□□ 2.98
CKB-208	ENST00000554426	IFNL1	Q8IU54	200 aa		33.69	■■■□□ 2.98
CKB-208	ENST00000554426	STK31	Q9BXU1	1019 aa		33.69	■■■□□ 2.98
CKB-208	ENST00000554426	MPHOSPH8	Q99549	860 aa		33.68	■■■□□ 2.98
CKB-208	ENST00000554426	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.68	■■■□□ 2.98
CKB-208	ENST00000554426	COL1A1	P02452	1464 aa	Predicted RBP	33.68	■■■□□ 2.98
CKB-208	ENST00000554426	IGF2BP3	O00425	579 aa	Known RBP eCLIP	33.67	■■■□□ 2.98
CKB-208	ENST00000554426	ALDH1A1	P00352	501 aa		33.67	■■■□□ 2.98
CKB-208	ENST00000554426	DLGAP5	Q15398	846 aa		33.67	■■■□□ 2.98
CKB-208	ENST00000554426	SLC10A4	Q96EP9	437 aa		33.67	■■■□□ 2.98
CKB-208	ENST00000554426	AOX1	Q06278	1338 aa		33.67	■■■□□ 2.98
CKB-208	ENST00000554426	MANSC4	A6NHS7	340 aa	Predicted RBP	33.66	■■■□□ 2.98
CKB-208	ENST00000554426	SLC4A2	P04920	1241 aa		33.66	■■■□□ 2.98
CKB-208	ENST00000554426	MTMR14	Q8NCE2	650 aa		33.66	■■■□□ 2.98
CKB-208	ENST00000554426	WNK4	Q96J92	1243 aa		33.66	■■■□□ 2.98
CKB-208	ENST00000554426	KCNJ4	P48050	445 aa		33.65	■■■□□ 2.98
CKB-208	ENST00000554426	OTOP1	Q7RTM1	612 aa		33.65	■■■□□ 2.98
CKB-208	ENST00000554426	TRIM17	Q9Y577	477 aa		33.65	■■■□□ 2.98

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms